BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0095.0028.p (295 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001238354.1| hypothetical protein BBta_2270 [Bradyrhizobi... 412 e-113 ref|YP_578447.1| hypothetical protein Nham_3252 [Nitrobacter ham... 411 e-113 ref|YP_001204062.1| hypothetical protein BRADO1963 [Bradyrhizobi... 409 e-112 ref|YP_779875.1| hypothetical protein RPE_0939 [Rhodopseudomonas... 403 e-110 ref|YP_530804.1| hypothetical protein RPC_0915 [Rhodopseudomonas... 401 e-110 >ref|YP_001238354.1| hypothetical protein BBta_2270 [Bradyrhizobium sp. BTAi1] gb|ABQ34448.1| hypothetical protein BBta_2270 [Bradyrhizobium sp. BTAi1] Length = 318 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 200/234 (85%), Positives = 214/234 (91%) Query: 59 RRSARDDHLYVREQEWEAAHTVWIWPDRSPSMAFASREARDSKLERGLIVAFALAELLVA 118 RRSARDDHLYVREQEWEAAHTVWIWPDRSPSMAFAS+ ARDSKLER LIV FALAELLVA Sbjct: 77 RRSARDDHLYVREQEWEAAHTVWIWPDRSPSMAFASKGARDSKLERALIVTFALAELLVA 136 Query: 119 GGERVGIPGLMNPTASLNVIDKMAEAMLHDEKTRASLPPSFVPSSLAEVVVLSDFWSPIT 178 GGERVGIPGL+NPT S +VID++A+AMLHDE R SLPPSFVPS+LAE+VVLSDFWSPI Sbjct: 137 GGERVGIPGLLNPTGSRSVIDRIAQAMLHDETARPSLPPSFVPSALAEIVVLSDFWSPIP 196 Query: 179 EITTMLAGLSSSGAHGTMIQVVDPAEETFPYSGRVEFVEPEAGSVITAGRAESWASDYVA 238 EI+TMLAGLS+SGAHGTM+QVVDPAEETFPYSGRVEFVEPE G VITAGRAESWA DYVA Sbjct: 197 EISTMLAGLSASGAHGTMVQVVDPAEETFPYSGRVEFVEPEGGEVITAGRAESWAQDYVA 256 Query: 239 RVALHRDQIRNETNRLDWLFSTHTTSRSAAELLLFLHAGMMVSKGGGRSTVKAG 292 RVALHRDQIR ET +LDWLF+THTTSRSAAELLLFLHAGM SK G R +VK G Sbjct: 257 RVALHRDQIRAETAKLDWLFTTHTTSRSAAELLLFLHAGMTTSKVGTRGSVKVG 310 >ref|YP_578447.1| hypothetical protein Nham_3252 [Nitrobacter hamburgensis X14] gb|ABE63987.1| protein of unknown function DUF58 [Nitrobacter hamburgensis X14] Length = 313 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 198/237 (83%), Positives = 216/237 (91%) Query: 59 RRSARDDHLYVREQEWEAAHTVWIWPDRSPSMAFASREARDSKLERGLIVAFALAELLVA 118 RRSARDDHLYVRE EWEAAHTVW+WPDRS SMAFASR+ARDSKLER LIV FALAELLVA Sbjct: 77 RRSARDDHLYVREHEWEAAHTVWVWPDRSASMAFASRQARDSKLERALIVTFALAELLVA 136 Query: 119 GGERVGIPGLMNPTASLNVIDKMAEAMLHDEKTRASLPPSFVPSSLAEVVVLSDFWSPIT 178 GGERVG+PGLMNPTA+ NVID+MA+AMLHD+ RASLPPSFVP + +++VVLSDFWSPI Sbjct: 137 GGERVGVPGLMNPTANRNVIDRMAQAMLHDDLARASLPPSFVPPARSQIVVLSDFWSPIA 196 Query: 179 EITTMLAGLSSSGAHGTMIQVVDPAEETFPYSGRVEFVEPEAGSVITAGRAESWASDYVA 238 EITTMLAGLS+SGAHGT++QVVDPAEETFPYSGRVEFVEPE GSVITAGRAE WA DYVA Sbjct: 197 EITTMLAGLSASGAHGTLLQVVDPAEETFPYSGRVEFVEPEDGSVITAGRAERWARDYVA 256 Query: 239 RVALHRDQIRNETNRLDWLFSTHTTSRSAAELLLFLHAGMMVSKGGGRSTVKAGRSA 295 RVALHRDQIR+ET LDWLFSTHTT RSAAELLLFLH GMM SKGGG ++VKA +A Sbjct: 257 RVALHRDQIRSETKTLDWLFSTHTTDRSAAELLLFLHGGMMASKGGGSTSVKAEHTA 313 >ref|YP_001204062.1| hypothetical protein BRADO1963 [Bradyrhizobium sp. ORS 278] emb|CAL75825.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 319 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 197/234 (84%), Positives = 212/234 (90%) Query: 59 RRSARDDHLYVREQEWEAAHTVWIWPDRSPSMAFASREARDSKLERGLIVAFALAELLVA 118 RRSARDDHLYVREQEWEAAHTVWIWPDRSPSMAFAS+ ARDSKLER LIV ALAELLVA Sbjct: 78 RRSARDDHLYVREQEWEAAHTVWIWPDRSPSMAFASKGARDSKLERALIVTLALAELLVA 137 Query: 119 GGERVGIPGLMNPTASLNVIDKMAEAMLHDEKTRASLPPSFVPSSLAEVVVLSDFWSPIT 178 GGERVGIPGL+NPTAS N+ID++A+AMLHDE R SLPPSFVP++LAE+VVLSDFWSPI+ Sbjct: 138 GGERVGIPGLVNPTASRNIIDRIAQAMLHDETVRPSLPPSFVPAALAEIVVLSDFWSPIS 197 Query: 179 EITTMLAGLSSSGAHGTMIQVVDPAEETFPYSGRVEFVEPEAGSVITAGRAESWASDYVA 238 EI T+LAGLS+SGAHGTM+QVVDPAEETFPYSGRVEFVEPE G VITAGRAESWA DYVA Sbjct: 198 EIGTVLAGLSASGAHGTMVQVVDPAEETFPYSGRVEFVEPEGGEVITAGRAESWAQDYVA 257 Query: 239 RVALHRDQIRNETNRLDWLFSTHTTSRSAAELLLFLHAGMMVSKGGGRSTVKAG 292 RVALHRDQIR ET +LDWLF+THTTSRSAAELLLFLHAGM K G R VK G Sbjct: 258 RVALHRDQIRAETGKLDWLFTTHTTSRSAAELLLFLHAGMTTGKLGARGNVKVG 311 >ref|YP_779875.1| hypothetical protein RPE_0939 [Rhodopseudomonas palustris BisA53] gb|ABJ04895.1| DUF58 [Rhodopseudomonas palustris BisA53] Length = 312 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 195/237 (82%), Positives = 217/237 (91%), Gaps = 1/237 (0%) Query: 59 RRSARDDHLYVREQEWEAAHTVWIWPDRSPSMAFASREARDSKLERGLIVAFALAELLVA 118 RRSARDDHLYVREQEWEAAHTVW+WPDRS SMAFAS+ ARDSKLER LIV FALAELLVA Sbjct: 77 RRSARDDHLYVREQEWEAAHTVWLWPDRSASMAFASKGARDSKLERALIVTFALAELLVA 136 Query: 119 GGERVGIPGLMNPTASLNVIDKMAEAMLHDEKTRASLPPSFVPSSLAEVVVLSDFWSPIT 178 GGERVG+PGLMNPT++ NVID++A+AMLHD TRASLPPSFVP++L+E+VVLSDFWSPI Sbjct: 137 GGERVGVPGLMNPTSNSNVIDRIAQAMLHDTATRASLPPSFVPAALSEIVVLSDFWSPIG 196 Query: 179 EITTMLAGLSSSGAHGTMIQVVDPAEETFPYSGRVEFVEPEAGSVITAGRAESWASDYVA 238 EI TMLAGLS+SGAHGT++QVVDPAEE+FPYSGRVEFVEPE G +ITAGRAE+WA DYVA Sbjct: 197 EIRTMLAGLSASGAHGTLVQVVDPAEESFPYSGRVEFVEPEGGEMITAGRAETWARDYVA 256 Query: 239 RVALHRDQIRNETNRLDWLFSTHTTSRSAAELLLFLHAGMMVSKGGGRSTVKAGRSA 295 RVA HRD+IR ETN++DWLFSTHTTSRSAAELLL+LHAGMMVSK G VK GRSA Sbjct: 257 RVAAHRDEIRAETNKMDWLFSTHTTSRSAAELLLYLHAGMMVSKNGS-PGVKVGRSA 312 >ref|YP_530804.1| hypothetical protein RPC_0915 [Rhodopseudomonas palustris BisB18] gb|ABD86485.1| DUF58 [Rhodopseudomonas palustris BisB18] Length = 312 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/237 (82%), Positives = 215/237 (90%), Gaps = 1/237 (0%) Query: 59 RRSARDDHLYVREQEWEAAHTVWIWPDRSPSMAFASREARDSKLERGLIVAFALAELLVA 118 RRSARDDHLYVREQEWEAAHTVW+WPDRS SMAFAS+ ARDSKLER LIV+FALA+LLVA Sbjct: 77 RRSARDDHLYVREQEWEAAHTVWLWPDRSLSMAFASKTARDSKLERALIVSFALAQLLVA 136 Query: 119 GGERVGIPGLMNPTASLNVIDKMAEAMLHDEKTRASLPPSFVPSSLAEVVVLSDFWSPIT 178 GGERVG+PGLMNPT++ NVIDKMA+AMLHD TRASLPPSFVP++LAE+VVLSD WSPI Sbjct: 137 GGERVGVPGLMNPTSNSNVIDKMAQAMLHDTGTRASLPPSFVPAALAEIVVLSDCWSPIA 196 Query: 179 EITTMLAGLSSSGAHGTMIQVVDPAEETFPYSGRVEFVEPEAGSVITAGRAESWASDYVA 238 EI TMLAGLS+SGAHGT++QVVDPAEE+FPYSGRVEFV+PE G +ITAGRAE WASDYVA Sbjct: 197 EIKTMLAGLSASGAHGTLVQVVDPAEESFPYSGRVEFVDPEGGEMITAGRAEKWASDYVA 256 Query: 239 RVALHRDQIRNETNRLDWLFSTHTTSRSAAELLLFLHAGMMVSKGGGRSTVKAGRSA 295 RVA HRDQIR ETN+LDWLFSTHTTSRSAAELLLFLHAGM V+K VK GRSA Sbjct: 257 RVAAHRDQIRAETNKLDWLFSTHTTSRSAAELLLFLHAGMTVTK-NTTPGVKVGRSA 312