BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0095.0025.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_568435.1| hypothetical protein RPD_1296 [Rhodopseudomonas... 324 5e-87 ref|YP_578445.1| hypothetical protein Nham_3250 [Nitrobacter ham... 316 1e-84 ref|NP_769106.1| hypothetical protein blr2466 [Bradyrhizobium ja... 315 2e-84 ref|YP_530806.1| hypothetical protein RPC_0917 [Rhodopseudomonas... 311 4e-83 ref|YP_779877.1| hypothetical protein RPE_0941 [Rhodopseudomonas... 310 6e-83 >ref|YP_568435.1| hypothetical protein RPD_1296 [Rhodopseudomonas palustris BisB5] gb|ABE38534.1| protein of unknown function DUF1285 [Rhodopseudomonas palustris BisB5] Length = 203 Score = 324 bits (831), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 160/213 (75%), Positives = 175/213 (82%), Gaps = 10/213 (4%) Query: 1 MAKQGQSDSGRETTGLGSKGLEGLTTAANQAATSGPAGRKGLPPVHLWNPPFCGDLDMRI 60 MAKQGQ+ + L+GLT AA AA G KGLPPVHLWNPPFCGDLDMRI Sbjct: 1 MAKQGQT---------ANHSLDGLTEAARDAAGRSATG-KGLPPVHLWNPPFCGDLDMRI 50 Query: 61 APDGTWFYMGTPIGRPALVRLFSTILKREDGKHFLVTPVEKVGIRVDDAPFLAVEMQTGE 120 A DGTWFY+GTPIGRPALVRLFSTILKREDGKHFLVTPVEKVGI+VDDAPFLAVEM E Sbjct: 51 ASDGTWFYLGTPIGRPALVRLFSTILKREDGKHFLVTPVEKVGIKVDDAPFLAVEMVKDE 110 Query: 121 DARGRLLRFRTNVDDWVDCEKGHGLRFEAAEDGGLTPYLHVRADLWAKVTRALYYDLVDM 180 DA GR+LRFRTNVDDW+ C+ HGLRFE A DGG+ PYLHVRADLWAKVTRALYYDLVD+ Sbjct: 111 DALGRVLRFRTNVDDWITCDADHGLRFETAADGGIVPYLHVRADLWAKVTRALYYDLVDI 170 Query: 181 GEQRMVDGQEMFGIESGGEFFAMADASQVRDAL 213 GE+R+VDG +GI SGG FFAMADA Q+R+AL Sbjct: 171 GEERVVDGHPKYGIASGGAFFAMADAEQMREAL 203 >ref|YP_578445.1| hypothetical protein Nham_3250 [Nitrobacter hamburgensis X14] gb|ABE63985.1| protein of unknown function DUF1285 [Nitrobacter hamburgensis X14] Length = 201 Score = 316 bits (810), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 165/212 (77%), Positives = 173/212 (81%), Gaps = 12/212 (5%) Query: 1 MAKQGQSDSGRETTGLGSKGLEGLTTAANQAATSGPAGRKGLPPVHLWNPPFCGDLDMRI 60 MAKQG+S++ L+GLTTAA AA S P KGLPPVHLWNPPFCGDLDMRI Sbjct: 1 MAKQGRSEN---------LTLDGLTTAARGAAGS-PG--KGLPPVHLWNPPFCGDLDMRI 48 Query: 61 APDGTWFYMGTPIGRPALVRLFSTILKREDGKHFLVTPVEKVGIRVDDAPFLAVEMQTGE 120 A DGTWFYM TPIGRPALVRLFSTILKREDGKHFLVTPVEKVGI VDDAPFLAVEM Sbjct: 49 ASDGTWFYMRTPIGRPALVRLFSTILKREDGKHFLVTPVEKVGICVDDAPFLAVEMIVER 108 Query: 121 DARGRLLRFRTNVDDWVDCEKGHGLRFEAAEDGGLTPYLHVRADLWAKVTRALYYDLVDM 180 D GR LRFRTNV DWV C+ GH LRFE +E GGL PYLHVRA LWAKVTRALYYDLVDM Sbjct: 109 DENGRRLRFRTNVGDWVPCDFGHRLRFEPSEGGGLKPYLHVRAGLWAKVTRALYYDLVDM 168 Query: 181 GEQRMVDGQEMFGIESGGEFFAMADASQVRDA 212 GEQRM+DG+ MFGIESGGEFFAMADA QVRD Sbjct: 169 GEQRMIDGRMMFGIESGGEFFAMADAEQVRDT 200 >ref|NP_769106.1| hypothetical protein blr2466 [Bradyrhizobium japonicum USDA 110] dbj|BAC47731.1| blr2466 [Bradyrhizobium japonicum USDA 110] Length = 221 Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 163/213 (76%), Positives = 175/213 (82%), Gaps = 10/213 (4%) Query: 1 MAKQGQSDSGRETTGLGSKGLEGLTTAANQAATSGPAGRKGLPPVHLWNPPFCGDLDMRI 60 MA QGQS +GLEGLT AA AA++ A +KGLPPVHLWNPPFCGDLD+RI Sbjct: 19 MANQGQS---------ADRGLEGLTAAAKSAASAEGA-KKGLPPVHLWNPPFCGDLDIRI 68 Query: 61 APDGTWFYMGTPIGRPALVRLFSTILKREDGKHFLVTPVEKVGIRVDDAPFLAVEMQTGE 120 A DGTWFYMGTPIGR ALVRLFSTILKRE KHFLVTPVEKVGIRVDDAPF+AVEMQ Sbjct: 69 ASDGTWFYMGTPIGRHALVRLFSTILKREGDKHFLVTPVEKVGIRVDDAPFMAVEMQEDG 128 Query: 121 DARGRLLRFRTNVDDWVDCEKGHGLRFEAAEDGGLTPYLHVRADLWAKVTRALYYDLVDM 180 + R+LRFRTNVDDWV C+ H LRFE A DGGLTPYLHVRADLWAKVTRALYYDLVDM Sbjct: 129 EDNHRVLRFRTNVDDWVTCDAAHRLRFEQAVDGGLTPYLHVRADLWAKVTRALYYDLVDM 188 Query: 181 GEQRMVDGQEMFGIESGGEFFAMADASQVRDAL 213 GE+RMVDGQ MFG+ES GEFFAMADA +VR AL Sbjct: 189 GEERMVDGQPMFGVESAGEFFAMADADEVRAAL 221 >ref|YP_530806.1| hypothetical protein RPC_0917 [Rhodopseudomonas palustris BisB18] gb|ABD86487.1| protein of unknown function DUF1285 [Rhodopseudomonas palustris BisB18] Length = 200 Score = 311 bits (797), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 158/213 (74%), Positives = 170/213 (79%), Gaps = 13/213 (6%) Query: 1 MAKQGQSDSGRETTGLGSKGLEGLTTAANQAATSGPAGRKGLPPVHLWNPPFCGDLDMRI 60 MAKQGQS + L+GL AA S KGLPPVHLWNPPFCGDLDMRI Sbjct: 1 MAKQGQSPI---------QNLDGLVAAATGVGQSA----KGLPPVHLWNPPFCGDLDMRI 47 Query: 61 APDGTWFYMGTPIGRPALVRLFSTILKREDGKHFLVTPVEKVGIRVDDAPFLAVEMQTGE 120 A DGTWFY+GTPIGRPALVRLFSTILKREDGKHFLVTPVEKVGI+VDDAPFLAVEM Sbjct: 48 ASDGTWFYLGTPIGRPALVRLFSTILKREDGKHFLVTPVEKVGIQVDDAPFLAVEMVKDA 107 Query: 121 DARGRLLRFRTNVDDWVDCEKGHGLRFEAAEDGGLTPYLHVRADLWAKVTRALYYDLVDM 180 A G LLRFRTNVDDWV C++ H LRFE A DGGL PYLHVRA+LWAKVTRALYYDLVD+ Sbjct: 108 GADGPLLRFRTNVDDWVPCDREHRLRFEVAADGGLMPYLHVRAELWAKVTRALYYDLVDI 167 Query: 181 GEQRMVDGQEMFGIESGGEFFAMADASQVRDAL 213 GE+R+VDG+ MFGI SGG +FAMADA QVR AL Sbjct: 168 GEERVVDGRAMFGIASGGAYFAMADAEQVRGAL 200 >ref|YP_779877.1| hypothetical protein RPE_0941 [Rhodopseudomonas palustris BisA53] gb|ABJ04897.1| protein of unknown function DUF1285 [Rhodopseudomonas palustris BisA53] Length = 201 Score = 310 bits (795), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 156/213 (73%), Positives = 171/213 (80%), Gaps = 12/213 (5%) Query: 1 MAKQGQSDSGRETTGLGSKGLEGLTTAANQAATSGPAGRKGLPPVHLWNPPFCGDLDMRI 60 MA QGQ ++ LEGLTTAA +A +SG A KGLPPVHLWNPPFCGDLDMRI Sbjct: 1 MANQGQD---------ANRSLEGLTTAATKA-SSGAA--KGLPPVHLWNPPFCGDLDMRI 48 Query: 61 APDGTWFYMGTPIGRPALVRLFSTILKREDGKHFLVTPVEKVGIRVDDAPFLAVEMQTGE 120 A DGTWFY+GTPIGRPALVRLFST+LKREDGK+FLVTPVEKVGIRVDDAPFLAVEM Sbjct: 49 ASDGTWFYLGTPIGRPALVRLFSTVLKREDGKYFLVTPVEKVGIRVDDAPFLAVEMVKEA 108 Query: 121 DARGRLLRFRTNVDDWVDCEKGHGLRFEAAEDGGLTPYLHVRADLWAKVTRALYYDLVDM 180 G LRFRTNVDDWVDC+ H LRFE + +GGLTPYLHVRADLWAK+TR LYYDLVD+ Sbjct: 109 AEHGPRLRFRTNVDDWVDCDAAHRLRFEPSAEGGLTPYLHVRADLWAKLTRTLYYDLVDI 168 Query: 181 GEQRMVDGQEMFGIESGGEFFAMADASQVRDAL 213 E+RMVDG+ MFG+ SG FFAMADA VR AL Sbjct: 169 AEERMVDGRAMFGVASGDAFFAMADAEVVRTAL 201