BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0095.0015.p         (121 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_769122.1| 6-pyruvoyl tetrahydrobiopterin synthase [Bradyr...   227   4e-58
ref|ZP_08628636.1| queuosine biosynthesis QueD [Bradyrhizobiacea...   210   6e-53
ref|ZP_07027836.1| 6-pyruvoyl tetrahydropterin synthase and hypo...   209   7e-53
ref|YP_002289972.1| 6-pyruvoyl tetrahydrobiopterin synthase [Oli...   209   9e-53
ref|YP_578439.1| putative 6-pyruvoyl tetrahydropterin synthase [...   202   1e-50

>ref|NP_769122.1| 6-pyruvoyl tetrahydrobiopterin synthase [Bradyrhizobium japonicum
           USDA 110]
 dbj|BAC47747.1| bll2482 [Bradyrhizobium japonicum USDA 110]
          Length = 121

 Score =  227 bits (579), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 103/121 (85%), Positives = 116/121 (95%)

Query: 1   MWELTKAFRFEAAHALSGTTFGTASEEIHGHSFRAEVTVRGTPDPKTGMVIDLGLLERAM 60
           MWELTK+FRFEAAH+LSGTTFG ASEEIHGHSFRAEVTVRGTPDP+TGMV+DLGLL+RA+
Sbjct: 1   MWELTKSFRFEAAHSLSGTTFGAASEEIHGHSFRAEVTVRGTPDPETGMVVDLGLLQRAI 60

Query: 61  AEVQKTLDHKFLNKIEAIGVPTLENLSRFIWERLQHAGRLTRVSVHRDSCNESCTYFGPQ 120
            +V+ TLDHKFLNKIEA+G PTLENLSRF+WERLQH G+LTRVS+HRDSCNESCTY+GPQ
Sbjct: 61  EDVRLTLDHKFLNKIEALGKPTLENLSRFVWERLQHIGKLTRVSIHRDSCNESCTYYGPQ 120

Query: 121 G 121
           G
Sbjct: 121 G 121


>ref|ZP_08628636.1| queuosine biosynthesis QueD [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08701.1| queuosine biosynthesis QueD [Bradyrhizobiaceae bacterium SG-6C]
          Length = 121

 Score =  210 bits (535), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 94/121 (77%), Positives = 109/121 (90%)

Query: 1   MWELTKAFRFEAAHALSGTTFGTASEEIHGHSFRAEVTVRGTPDPKTGMVIDLGLLERAM 60
           MWELTK+FRFEAAH+L GTT G AS+E+HGHSFRAEVT+RGTPDP TGMV DLGLLE+ M
Sbjct: 1   MWELTKSFRFEAAHSLPGTTLGEASDEVHGHSFRAEVTIRGTPDPATGMVTDLGLLEQRM 60

Query: 61  AEVQKTLDHKFLNKIEAIGVPTLENLSRFIWERLQHAGRLTRVSVHRDSCNESCTYFGPQ 120
           AEVQ+ LDHK+LNKIE +G PTLENL+RFIW+R+QH G++ RVSV+RDSC ESCTYFGPQ
Sbjct: 61  AEVQRILDHKWLNKIETLGAPTLENLTRFIWDRVQHTGQVVRVSVYRDSCGESCTYFGPQ 120

Query: 121 G 121
           G
Sbjct: 121 G 121


>ref|ZP_07027836.1| 6-pyruvoyl tetrahydropterin synthase and hypothetical protein
           [Afipia sp. 1NLS2]
 gb|EFI50657.1| 6-pyruvoyl tetrahydropterin synthase and hypothetical protein
           [Afipia sp. 1NLS2]
          Length = 122

 Score =  209 bits (533), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 96/120 (80%), Positives = 108/120 (90%)

Query: 1   MWELTKAFRFEAAHALSGTTFGTASEEIHGHSFRAEVTVRGTPDPKTGMVIDLGLLERAM 60
           MWELTK+F FEAAH+L GTT G  SEEIHGHSFRAEVT+RGTPDP TGMV+DLGLLER +
Sbjct: 1   MWELTKSFHFEAAHSLKGTTLGENSEEIHGHSFRAEVTIRGTPDPATGMVMDLGLLERKI 60

Query: 61  AEVQKTLDHKFLNKIEAIGVPTLENLSRFIWERLQHAGRLTRVSVHRDSCNESCTYFGPQ 120
           A+V+K LDHKFLNKIEAIG+PTLENLSR+IW+ +Q AG +TRVSVHRDSC ESCTYFGPQ
Sbjct: 61  ADVRKALDHKFLNKIEAIGLPTLENLSRYIWDSVQGAGDVTRVSVHRDSCGESCTYFGPQ 120


>ref|YP_002289972.1| 6-pyruvoyl tetrahydrobiopterin synthase [Oligotropha
           carboxidovorans OM5]
 ref|YP_004632051.1| 6-pyruvoyl tetrahydrobiopterin [Oligotropha carboxidovorans OM5]
 gb|ACI94107.1| 6-pyruvoyl tetrahydrobiopterin synthase [Oligotropha
           carboxidovorans OM5]
 gb|AEI02234.1| putative 6-pyruvoyl tetrahydrobiopterin [Oligotropha
           carboxidovorans OM4]
 gb|AEI05810.1| putative 6-pyruvoyl tetrahydrobiopterin [Oligotropha
           carboxidovorans OM5]
          Length = 121

 Score =  209 bits (533), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 95/119 (79%), Positives = 108/119 (90%)

Query: 1   MWELTKAFRFEAAHALSGTTFGTASEEIHGHSFRAEVTVRGTPDPKTGMVIDLGLLERAM 60
           MWELTK+FRFEAAH+L GTT G +SEEIHGHSFRAEVTVRGTPDP TGMV+DLGLLE+ +
Sbjct: 1   MWELTKSFRFEAAHSLKGTTLGESSEEIHGHSFRAEVTVRGTPDPATGMVMDLGLLEQKI 60

Query: 61  AEVQKTLDHKFLNKIEAIGVPTLENLSRFIWERLQHAGRLTRVSVHRDSCNESCTYFGP 119
           A ++  LDHKFLNKIEA+GVPTLENLSR+IWE++Q AG +TRVSVHRDSC ESCTYFGP
Sbjct: 61  AAIRSALDHKFLNKIEALGVPTLENLSRYIWEQVQGAGNVTRVSVHRDSCGESCTYFGP 119


>ref|YP_578439.1| putative 6-pyruvoyl tetrahydropterin synthase [Nitrobacter
           hamburgensis X14]
 gb|ABE63979.1| 6-pyruvoyl tetrahydropterin synthase and hypothetical protein
           [Nitrobacter hamburgensis X14]
          Length = 121

 Score =  202 bits (515), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 92/120 (76%), Positives = 105/120 (87%)

Query: 1   MWELTKAFRFEAAHALSGTTFGTASEEIHGHSFRAEVTVRGTPDPKTGMVIDLGLLERAM 60
           MWELTK+FRFEAAH+L GTTFG AS EIHGHSFRAEV+VRGTPDP TGMV+DLGLLER M
Sbjct: 1   MWELTKSFRFEAAHSLPGTTFGAASMEIHGHSFRAEVSVRGTPDPATGMVLDLGLLERGM 60

Query: 61  AEVQKTLDHKFLNKIEAIGVPTLENLSRFIWERLQHAGRLTRVSVHRDSCNESCTYFGPQ 120
            EV+  LDHK LN +E +G PTLENL+RFIW+ +Q AG++TRVSVHRDSC ESCTYFGP+
Sbjct: 61  GEVRNKLDHKLLNNVEGLGPPTLENLARFIWDHVQPAGQVTRVSVHRDSCGESCTYFGPR 120