BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0095.0006.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769131.1| hypothetical protein bll2491 [Bradyrhizobium ja... 353 8e-96 ref|YP_783341.1| hypothetical protein RPE_4437 [Rhodopseudomonas... 335 4e-90 ref|YP_534221.1| hypothetical protein RPC_4379 [Rhodopseudomonas... 329 2e-88 ref|YP_578431.1| hypothetical protein Nham_3236 [Nitrobacter ham... 324 5e-87 emb|CAQ57579.1| hypothetical protein [Bradyrhizobium elkanii] 320 9e-86 >ref|NP_769131.1| hypothetical protein bll2491 [Bradyrhizobium japonicum USDA 110] dbj|BAC47756.1| bll2491 [Bradyrhizobium japonicum USDA 110] Length = 223 Score = 353 bits (907), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 167/222 (75%), Positives = 187/222 (84%) Query: 1 MSSTPVYIICSPRPQVGKTLIARLLGEFLLLKNGDVVCYDINLKEPSLLDYLPRITETAD 60 M +TPVYIICSPRPQVGKTL+ARLL EFLLLKNG+V +D+NLKEPSLLDYLP+ITETAD Sbjct: 2 MPATPVYIICSPRPQVGKTLLARLLSEFLLLKNGNVAAFDVNLKEPSLLDYLPKITETAD 61 Query: 61 VIDTYGKMQLMDRVIANDGIGKVIDLGYHAFDEFFKMCDEIGLMKEALRRRVAPIILYVA 120 VIDTYGKMQLMDRVI +DG+ KVIDLG+HAFDEFFKM DEIGL+KEA RR VAP IL+VA Sbjct: 62 VIDTYGKMQLMDRVIVDDGVAKVIDLGFHAFDEFFKMADEIGLLKEAARRHVAPQILFVA 121 Query: 121 DTDRASVRGYQTLHGMIPPNALFVIDNEFVVRGELPPVMTASRVLRFRALPVFLKTYIDR 180 DTDR S R ++ L IP L +DNE+VVRGELP M R+ R ALP FLKTYIDR Sbjct: 122 DTDRVSARAHEMLREQIPRMNLITVDNEYVVRGELPAAMAGGRLFRLPALPGFLKTYIDR 181 Query: 181 LNFSFTGYLRQEKDSSTELHQWIRRNYTTFRDLELSVLLQRG 222 LNFSFTGYLRQEKD+STELHQW RRNY FR+LELS++LQR Sbjct: 182 LNFSFTGYLRQEKDASTELHQWTRRNYLAFRELELSLILQRS 223 >ref|YP_783341.1| hypothetical protein RPE_4437 [Rhodopseudomonas palustris BisA53] gb|ABJ08361.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 222 Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 158/217 (72%), Positives = 178/217 (82%) Query: 1 MSSTPVYIICSPRPQVGKTLIARLLGEFLLLKNGDVVCYDINLKEPSLLDYLPRITETAD 60 M TPVYIICSPRPQVGKTLIARLL EFLLL+ GDV +D+N+KEPSLLDYLP +TETA+ Sbjct: 1 MPRTPVYIICSPRPQVGKTLIARLLTEFLLLQRGDVAAFDVNVKEPSLLDYLPNVTETAN 60 Query: 61 VIDTYGKMQLMDRVIANDGIGKVIDLGYHAFDEFFKMCDEIGLMKEALRRRVAPIILYVA 120 V DT+GKM LMDR+I +D +GKV+DLGYH FDEFF M EIG MKEA RR VAP+ L+VA Sbjct: 61 VDDTFGKMALMDRLILDDRLGKVVDLGYHVFDEFFTMLAEIGFMKEAARRGVAPVFLFVA 120 Query: 121 DTDRASVRGYQTLHGMIPPNALFVIDNEFVVRGELPPVMTASRVLRFRALPVFLKTYIDR 180 DTDRAS RGY TL IPP AL +DNE ++RGE+PP+ R+L ALP FLKTYIDR Sbjct: 121 DTDRASARGYDTLQAQIPPKALITVDNEHILRGEMPPLFAHGRMLPVGALPSFLKTYIDR 180 Query: 181 LNFSFTGYLRQEKDSSTELHQWIRRNYTTFRDLELSV 217 LNFSFTGYLR EKDSSTELHQWIRRNYT FRDLEL + Sbjct: 181 LNFSFTGYLRAEKDSSTELHQWIRRNYTNFRDLELQL 217 >ref|YP_534221.1| hypothetical protein RPC_4379 [Rhodopseudomonas palustris BisB18] gb|ABD89902.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 219 Score = 329 bits (843), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 156/215 (72%), Positives = 178/215 (82%) Query: 1 MSSTPVYIICSPRPQVGKTLIARLLGEFLLLKNGDVVCYDINLKEPSLLDYLPRITETAD 60 M+ TPVYIICSPRP VGKTLIARLL EFL L+ GDVV +D+NLKEPSLLDYLPR+TETA Sbjct: 1 MARTPVYIICSPRPFVGKTLIARLLAEFLALQRGDVVAFDVNLKEPSLLDYLPRLTETAS 60 Query: 61 VIDTYGKMQLMDRVIANDGIGKVIDLGYHAFDEFFKMCDEIGLMKEALRRRVAPIILYVA 120 V DT+GKM LMDR+I +DGI KV+DLG+HAFDEFFKM +EIG +KEA RR+VAP IL+VA Sbjct: 61 VDDTFGKMALMDRLILDDGIAKVVDLGFHAFDEFFKMSEEIGYLKEAARRQVAPQILFVA 120 Query: 121 DTDRASVRGYQTLHGMIPPNALFVIDNEFVVRGELPPVMTASRVLRFRALPVFLKTYIDR 180 DTDR S+RGY L IPP AL + N++ +RGE+P V RVL ALP FLKTYIDR Sbjct: 121 DTDRGSLRGYDMLQAQIPPRALVTVANDYALRGEMPAVFARGRVLPIDALPTFLKTYIDR 180 Query: 181 LNFSFTGYLRQEKDSSTELHQWIRRNYTTFRDLEL 215 LNFSFTGYLR EKDSSTELHQWIR+NY +FRDLEL Sbjct: 181 LNFSFTGYLRTEKDSSTELHQWIRKNYFSFRDLEL 215 >ref|YP_578431.1| hypothetical protein Nham_3236 [Nitrobacter hamburgensis X14] gb|ABE63971.1| hypothetical protein Nham_3236 [Nitrobacter hamburgensis X14] Length = 225 Score = 324 bits (831), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 148/222 (66%), Positives = 181/222 (81%) Query: 1 MSSTPVYIICSPRPQVGKTLIARLLGEFLLLKNGDVVCYDINLKEPSLLDYLPRITETAD 60 M TPVYIICSPRPQVGKTLIAR L E+L L+ GDV+ +D+NLKEPSL+DYLPR+TETA+ Sbjct: 4 MPRTPVYIICSPRPQVGKTLIARQLSEYLRLQRGDVLAFDVNLKEPSLVDYLPRLTETAE 63 Query: 61 VIDTYGKMQLMDRVIANDGIGKVIDLGYHAFDEFFKMCDEIGLMKEALRRRVAPIILYVA 120 + DT+GKM LMD++I +DG+ KVIDLGYHAFDEFF M +EIG +KEA RR VAP++L++A Sbjct: 64 IDDTFGKMALMDQLIVDDGLAKVIDLGYHAFDEFFGMIEEIGFVKEAARRGVAPVVLFIA 123 Query: 121 DTDRASVRGYQTLHGMIPPNALFVIDNEFVVRGELPPVMTASRVLRFRALPVFLKTYIDR 180 D+DR S RGYQTL +PP A+ ++DNEFV+RGELP SRV+ ALP FLK+YIDR Sbjct: 124 DSDRVSARGYQTLRATLPPGAVVIVDNEFVLRGELPETFIHSRVMHIAALPAFLKSYIDR 183 Query: 181 LNFSFTGYLRQEKDSSTELHQWIRRNYTTFRDLELSVLLQRG 222 L FSFT YLR EKD+STELHQW R NY +FR++EL + QRG Sbjct: 184 LTFSFTDYLRTEKDTSTELHQWTRNNYFSFREIELQLAQQRG 225 >emb|CAQ57579.1| hypothetical protein [Bradyrhizobium elkanii] Length = 251 Score = 320 bits (820), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 156/222 (70%), Positives = 178/222 (80%), Gaps = 1/222 (0%) Query: 1 MSSTPVYIICSPRPQVGKTLIARLLGEFLLLKNGDVVCYDINLKEPSLLDYLPRITETAD 60 M +TP+YIICSP PQVGKTL+ARL+ E+LLLKNG + +D+NLKEPSLLDYLP ITETAD Sbjct: 1 MLATPIYIICSPSPQVGKTLVARLVSEYLLLKNGTALSFDVNLKEPSLLDYLPNITETAD 60 Query: 61 VIDTYGKMQLMDRVIANDGIGKVIDLGYHAFDEFFKMCDEIGLMKEALRRRVAPIILYVA 120 VIDTYGKMQLMD +I +D + KVIDLG+HAFDEFFKMC+EIG +KE R VAP+IL+VA Sbjct: 61 VIDTYGKMQLMDPLIIHDRVAKVIDLGFHAFDEFFKMCEEIGFIKETARCCVAPVILFVA 120 Query: 121 DTDRASVRGYQTLHGMIPPNALFVIDNEFVVRGELPPVMTASRVLRFRALPVFLKTYIDR 180 DR S RGYQ L IPP AL + NEFV+R LP M RVLR ALP+FLK YIDR Sbjct: 121 GADRHSFRGYQMLRRQIPPAALVTVHNEFVLREGLPDAMDCERVLRISALPLFLKRYIDR 180 Query: 181 LNFSFTGYLRQEKDSSTELHQWIRRNYTTFRDLELSVLLQRG 222 L+FSFTGYLR EKD +TELHQWIRRNYT RDLE SV +QRG Sbjct: 181 LSFSFTGYLRDEKDWTTELHQWIRRNYTMLRDLESSV-MQRG 221