BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0095.0002.p (324 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769135.1| hypothetical protein bll2495 [Bradyrhizobium ja... 429 e-118 ref|YP_002289959.1| methyltransferase type 11 [Oligotropha carbo... 412 e-113 ref|ZP_08628654.1| methyltransferase [Bradyrhizobiaceae bacteriu... 410 e-112 ref|YP_568332.1| hypothetical protein RPD_1193 [Rhodopseudomonas... 406 e-111 ref|YP_534217.1| hypothetical protein RPC_4375 [Rhodopseudomonas... 398 e-109 >ref|NP_769135.1| hypothetical protein bll2495 [Bradyrhizobium japonicum USDA 110] dbj|BAC47760.1| bll2495 [Bradyrhizobium japonicum USDA 110] Length = 327 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/324 (66%), Positives = 255/324 (78%), Gaps = 3/324 (0%) Query: 1 MTSPDLPAELRAALNARLEGLSRSDAAGRAAVISQTYREGGGSSTIRTETDALAYALARM 60 M SP LPAEL+AAL+ +L+G SRSDAA R+ IS TYR GGGS TI++E DALAYALARM Sbjct: 3 MISPTLPAELKAALDGKLQGFSRSDAAQRSQKISNTYRAGGGSGTIKSEADALAYALARM 62 Query: 61 PATYAAVVASLNALTEIRPDFAPARLLDVGAGPGTATWAAAEAFTKKKKLRAFSLLDANS 120 PATYAAV ASLNALTEI PDFAP LLDVGAGPGTA+WAAAEAF L+ F+LLDAN+ Sbjct: 63 PATYAAVAASLNALTEIAPDFAPVTLLDVGAGPGTASWAAAEAF---PSLQDFTLLDANA 119 Query: 121 ALRSLAEDLFHGSIRLHDTSYELGQARALLDKAEPADLVVASYMIGELGDAERGALADAL 180 L LA +L H S RL Y G A L + PADLVVASY+IGELG+A++ LA+ + Sbjct: 120 TLSRLALELAHDSTRLAGCRYLPGDAGGNLAEVSPADLVVASYIIGELGEADQRKLAETM 179 Query: 181 WSKTSDTLLVVEPGMPAGYARIIALRARLIAAGAHVVAPCPHDGGCPLVAPDWCHFSQRL 240 W+K L+V+EPG PAGYARI+ALR ++IAAGA+V APCPH+ CPL+APDWCHFSQRL Sbjct: 180 WAKARHALVVIEPGTPAGYARILALRQQMIAAGAYVAAPCPHERPCPLIAPDWCHFSQRL 239 Query: 241 QRSRAHKQVKGAELPFEDERFAYVALSRARVENRPSRVLAQPDVGKVEIAAKLCTPEGVS 300 RS+AH+Q+KGA++PFEDERF YVAL+R R +RVLA PDVGK EI AKLCT + V Sbjct: 240 PRSQAHRQIKGADVPFEDERFIYVALTRTPPATRAARVLAPPDVGKAEITAKLCTGDDVG 299 Query: 301 VAKIPRRARAEYASARRWRWGDAV 324 +AKIPRR +A YASARRWRWGDAV Sbjct: 300 LAKIPRRDKAAYASARRWRWGDAV 323 >ref|YP_002289959.1| methyltransferase type 11 [Oligotropha carboxidovorans OM5] ref|YP_004632064.1| methylase [Oligotropha carboxidovorans OM5] gb|ACI94094.1| methyltransferase type 11 [Oligotropha carboxidovorans OM5] gb|AEI02247.1| putative methylase [Oligotropha carboxidovorans OM4] gb|AEI05823.1| putative methylase [Oligotropha carboxidovorans OM5] Length = 326 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 211/324 (65%), Positives = 244/324 (75%), Gaps = 4/324 (1%) Query: 1 MTSPDLPAELRAALNARLEGLSRSDAAGRAAVISQTYREGGGSSTIRTETDALAYALARM 60 M++ DLPA+L+AAL + EGLSRSDAA RA IS+TYR GG S+ IRTE DALAYAL RM Sbjct: 1 MSAFDLPADLKAALARKAEGLSRSDAAKRAGTISETYRSGGTSAPIRTEADALAYALTRM 60 Query: 61 PATYAAVVASLNALTEIRPDFAPARLLDVGAGPGTATWAAAEAFTKKKKLRAFSLLDANS 120 PATYAA+ ASLNAL+E RPDF PA LLDVGAGP TA+WAAA F L F +DAN+ Sbjct: 61 PATYAAIAASLNALSERRPDFTPATLLDVGAGPATASWAAARTF---DSLTHFVAIDANA 117 Query: 121 ALRSLAEDLFHGSIRLHDTSYELGQARALLDKAEPADLVVASYMIGELGDAERGALADAL 180 ALR+LA D S RL Y G A L E ADLV+ASY+I ELG+A+R LAD + Sbjct: 118 ALRALACDTVTDS-RLAAMRYVEGNVLAGLAAMESADLVIASYVINELGEADRTTLADLM 176 Query: 181 WSKTSDTLLVVEPGMPAGYARIIALRARLIAAGAHVVAPCPHDGGCPLVAPDWCHFSQRL 240 W KT DTLLVVEPG PAGY RI+ALRA LIA GAHV+APCPHD CPL PDWCHFSQRL Sbjct: 177 WQKTRDTLLVVEPGTPAGYERILALRAHLIAQGAHVIAPCPHDNACPLTPPDWCHFSQRL 236 Query: 241 QRSRAHKQVKGAELPFEDERFAYVALSRARVENRPSRVLAQPDVGKVEIAAKLCTPEGVS 300 RSRAHKQ+KGAELPFEDER++YVALSR SR+L+QP + K+E+AAKLCT G+S Sbjct: 237 ARSRAHKQIKGAELPFEDERYSYVALSRTLAPGHISRILSQPTLTKIEVAAKLCTTAGLS 296 Query: 301 VAKIPRRARAEYASARRWRWGDAV 324 +PRR +A YA+ARRW WGDA+ Sbjct: 297 RLAVPRRDKAGYAAARRWNWGDAI 320 >ref|ZP_08628654.1| methyltransferase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08719.1| methyltransferase [Bradyrhizobiaceae bacterium SG-6C] Length = 330 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 208/324 (64%), Positives = 239/324 (73%), Gaps = 3/324 (0%) Query: 1 MTSPDLPAELRAALNARLEGLSRSDAAGRAAVISQTYREGGGSSTIRTETDALAYALARM 60 M SP+LP+EL AAL + EGLSR+DAA RA ISQTYR GGGS I+T DALAYALARM Sbjct: 1 MISPNLPSELLAALARKAEGLSRADAAQRADTISQTYRSGGGSGRIKTTADALAYALARM 60 Query: 61 PATYAAVVASLNALTEIRPDFAPARLLDVGAGPGTATWAAAEAFTKKKKLRAFSLLDANS 120 P TYAAV ASLNAL E PDFAP LLDVGAGPGTATWAA+EAF L F+LLDAN+ Sbjct: 61 PGTYAAVAASLNALMECDPDFAPQSLLDVGAGPGTATWAASEAFAS---LDRFTLLDANT 117 Query: 121 ALRSLAEDLFHGSIRLHDTSYELGQARALLDKAEPADLVVASYMIGELGDAERGALADAL 180 ALR LA +L RL Y G AR L A ADLVVASY++ EL + ER A ADAL Sbjct: 118 ALRDLATELVTSQPRLETLRYYAGDARKALTDAPEADLVVASYVVNELSEGERAAFADAL 177 Query: 181 WSKTSDTLLVVEPGMPAGYARIIALRARLIAAGAHVVAPCPHDGGCPLVAPDWCHFSQRL 240 W+KT D LLVVEPG PAGY+ I++LR RLIA GA+VVAPCPHD C LVAPDWCHF+QRL Sbjct: 178 WAKTRDMLLVVEPGSPAGYSHILSLRDRLIAQGAYVVAPCPHDAACALVAPDWCHFTQRL 237 Query: 241 QRSRAHKQVKGAELPFEDERFAYVALSRARVENRPSRVLAQPDVGKVEIAAKLCTPEGVS 300 QRSRAHK +K A LP+EDE+F+YV LSR RPSRVLAQP V K+ + AK+C +G+ Sbjct: 238 QRSRAHKHLKAAALPYEDEKFSYVVLSRKAPAQRPSRVLAQPLVTKIAVTAKICASDGIR 297 Query: 301 VAKIPRRARAEYASARRWRWGDAV 324 A IP R +A Y A++W WGDA+ Sbjct: 298 TASIPHRNKAAYKRAKKWAWGDAI 321 >ref|YP_568332.1| hypothetical protein RPD_1193 [Rhodopseudomonas palustris BisB5] gb|ABE38431.1| Methyltransferase type 11 [Rhodopseudomonas palustris BisB5] Length = 327 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 216/324 (66%), Positives = 248/324 (76%), Gaps = 4/324 (1%) Query: 1 MTSPDLPAELRAALNARLEGLSRSDAAGRAAVISQTYREGGGSSTIRTETDALAYALARM 60 M P LPA L+AAL GLSR DAA RA ISQTYR+GG SS IRTETDALAYA ARM Sbjct: 1 MIPPSLPAALKAALEQHSHGLSRGDAAARAGAISQTYRDGGNSSPIRTETDALAYAGARM 60 Query: 61 PATYAAVVASLNALTEIRPDFAPARLLDVGAGPGTATWAAAEAFTKKKKLRAFSLLDANS 120 PATYAAV ASLNAL E RPDFAPA LLDVGAGPGTA+WAAA+AF L+AF+LLDAN Sbjct: 61 PATYAAVAASLNALLEFRPDFAPAALLDVGAGPGTASWAAAQAF---DTLQAFTLLDANR 117 Query: 121 ALRSLAEDLFHGSIRLHDTSYELGQARALLDKAEPADLVVASYMIGELGDAERGALADAL 180 ALR LA L GS R+ +Y+LG AR LL A A LV+ASY+I ELG+AER ADAL Sbjct: 118 ALRDLALTLAQGS-RIAAMNYQLGDARKLLSDAPEAALVIASYVINELGEAERDRFADAL 176 Query: 181 WSKTSDTLLVVEPGMPAGYARIIALRARLIAAGAHVVAPCPHDGGCPLVAPDWCHFSQRL 240 W KT+DTLL+VEPG PAGYAR++ALR+RLIA GA V+APCPH+ CPL APDWCHF QRL Sbjct: 177 WRKTTDTLLIVEPGTPAGYARVLALRSRLIAQGAQVIAPCPHEHACPLTAPDWCHFVQRL 236 Query: 241 QRSRAHKQVKGAELPFEDERFAYVALSRARVENRPSRVLAQPDVGKVEIAAKLCTPEGVS 300 RSR H+Q+KGAE+P+EDE+F Y+AL+RA + RPSRVLAQP++ K I AKLCTP+G+ Sbjct: 237 PRSRLHQQLKGAEVPYEDEKFIYLALTRAPLPPRPSRVLAQPELTKAAITAKLCTPQGLV 296 Query: 301 VAKIPRRARAEYASARRWRWGDAV 324 A PRR + YA RR WGD V Sbjct: 297 HAAAPRRDKPAYAQFRRLSWGDTV 320 >ref|YP_534217.1| hypothetical protein RPC_4375 [Rhodopseudomonas palustris BisB18] gb|ABD89898.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 321 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 196/306 (64%), Positives = 235/306 (76%), Gaps = 3/306 (0%) Query: 19 EGLSRSDAAGRAAVISQTYREGGGSSTIRTETDALAYALARMPATYAAVVASLNALTEIR 78 GLS ++AA RAA +SQTYR GGGS IR+E DALAYALARMPATYAAV A L+AL+ R Sbjct: 19 HGLSLNEAATRAAAMSQTYRAGGGSLAIRSEADALAYALARMPATYAAVTACLDALSAQR 78 Query: 79 PDFAPARLLDVGAGPGTATWAAAEAFTKKKKLRAFSLLDANSALRSLAEDLFHGSIRLHD 138 PDFAP LLD GAGPGTATWAAAE F L+ F+L DAN+ALR+LA DL GS RL Sbjct: 79 PDFAPRSLLDCGAGPGTATWAAAEGFAS---LQTFALFDANAALRALAGDLMQGSQRLAA 135 Query: 139 TSYELGQARALLDKAEPADLVVASYMIGELGDAERGALADALWSKTSDTLLVVEPGMPAG 198 T Y G A LL +AEPADL++ASYM+ EL + +R AD W+KT+DTL++VEPG PAG Sbjct: 136 TCYTQGDAATLLAQAEPADLLIASYMVNELSETQRNVFADLAWAKTTDTLVIVEPGTPAG 195 Query: 199 YARIIALRARLIAAGAHVVAPCPHDGGCPLVAPDWCHFSQRLQRSRAHKQVKGAELPFED 258 YARI++LRARLIA GA V APCPHDG CPLVAPDWCHF+QRL RSRAH+ +KGAEL +ED Sbjct: 196 YARILSLRARLIAQGAQVAAPCPHDGACPLVAPDWCHFTQRLPRSRAHQHLKGAELAYED 255 Query: 259 ERFAYVALSRARVENRPSRVLAQPDVGKVEIAAKLCTPEGVSVAKIPRRARAEYASARRW 318 E+F+YVAL+RA + RP+R+LAQP K+ + AKLCT G+ +A PRR +A+YA R+ Sbjct: 256 EKFSYVALTRAPLLPRPARLLAQPLATKIAVTAKLCTANGLDIATAPRRHKADYARFRKL 315 Query: 319 RWGDAV 324 WGD V Sbjct: 316 DWGDTV 321