BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0139.p (210 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08072407.1| two component transcriptional regulator, LuxR... 210 1e-52 ref|ZP_05055542.1| response regulator receiver domain protein [V... 189 2e-46 ref|YP_002464103.1| LuxR family two component transcriptional re... 189 2e-46 ref|YP_001634289.1| response regulator receiver [Chloroflexus au... 179 2e-43 ref|YP_004174179.1| NarL family two-component response regulator... 179 3e-43 >ref|ZP_08072407.1| two component transcriptional regulator, LuxR family [Methylocystis sp. ATCC 49242] gb|EFX99839.1| two component transcriptional regulator, LuxR family [Methylocystis sp. ATCC 49242] Length = 220 Score = 210 bits (534), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 110/211 (52%), Positives = 157/211 (74%), Gaps = 3/211 (1%) Query: 1 VLIAEDQTLIREGIATLLAQQNDDFEILPGAADGEQAIEFARRYRPDVILMDLQMPRVDG 60 ++IAEDQT+IR+ +A LLA + D +++ AADGEQA+ AR Y PDVILMD +MPR+DG Sbjct: 9 IMIAEDQTVIRKALAALLALEAD-IDVVATAADGEQAVSAARAYSPDVILMDAKMPRMDG 67 Query: 61 IAATQRILRELPQTHIVVLTTFETNDLIFEAVSAGAKAYLLKDARMEEIASTIRAVINGQ 120 +AAT+ IL + P+T +++LTTF+ +L+++A++AGA+AYLLKD+ EI + IRAV G+ Sbjct: 68 VAATRMILSDNPRTRVIMLTTFDNEELVYDAITAGAQAYLLKDSEESEILAAIRAVAKGE 127 Query: 121 SGLSPSVAARILDEFKRLRGPRVSAKLPVRD--GLTARENEILTLIVEGKSNTEIGEQLH 178 LSPSVAA+IL EF+R++ P+ +A D LT RE +L + GK N EI ++ Sbjct: 128 PRLSPSVAAKILAEFRRVKSPQRAASPSAEDEEPLTDREKAVLAHVAAGKGNREIAREMG 187 Query: 179 LAEGTVKNYVSTILEKCQVKNRTELAIKAIT 209 LAEGTVKN+VSTIL K +++RTELAI+A++ Sbjct: 188 LAEGTVKNHVSTILAKLHLRSRTELAIRALS 218 >ref|ZP_05055542.1| response regulator receiver domain protein [Verrucomicrobiae bacterium DG1235] gb|EDY80682.1| response regulator receiver domain protein [Verrucomicrobiae bacterium DG1235] Length = 220 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 95/209 (45%), Positives = 143/209 (68%), Gaps = 3/209 (1%) Query: 1 VLIAEDQTLIREGIATLLAQQNDDFEILPGAADGEQAIEFARRYRPDVILMDLQMPRVDG 60 +++A+DQ L EG+ TLL+ +D EI+ +G++A+E RR RP ++LMDL MP +DG Sbjct: 7 IVLADDQALFLEGLKTLLSL-DDSLEIVGECHNGQEALEACRRLRPQIVLMDLNMPVMDG 65 Query: 61 IAATQRILRELPQTHIVVLTTFETNDLIFEAVSAGAKAYLLKDARMEEIASTIRAVINGQ 120 +AAT+ I +ELP+ +++ LTTF+ ++ +FEA+ AG+ YLLKD +++ IRAV +G+ Sbjct: 66 VAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAIRAVSSGE 125 Query: 121 SGLSPSVAARILDEFKRLRGPRVSAKLPV--RDGLTARENEILTLIVEGKSNTEIGEQLH 178 S L PS+A+++L EF R+ GP K PV R+ L+ RE ++L + G SN EI L Sbjct: 126 SFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNKEIASHLD 185 Query: 179 LAEGTVKNYVSTILEKCQVKNRTELAIKA 207 LAEGTVKN+VS +L K V +RT+ A+ A Sbjct: 186 LAEGTVKNHVSNVLGKLGVLDRTQAALMA 214 >ref|YP_002464103.1| LuxR family two component transcriptional regulator [Chloroflexus aggregans DSM 9485] gb|ACL25667.1| two component transcriptional regulator, LuxR family [Chloroflexus aggregans DSM 9485] Length = 216 Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 92/207 (44%), Positives = 143/207 (69%), Gaps = 1/207 (0%) Query: 1 VLIAEDQTLIREGIATLLAQQNDDFEILPGAADGEQAIEFARRYRPDVILMDLQMPRVDG 60 +L+ +DQTL+R+GI TLL + +D ++ AA+G+QA+E A + +PDV+LMD++MP +DG Sbjct: 4 ILLVDDQTLVRQGIQTLLDLE-EDLTVVGAAANGQQALELAEQLQPDVVLMDIRMPVMDG 62 Query: 61 IAATQRILRELPQTHIVVLTTFETNDLIFEAVSAGAKAYLLKDARMEEIASTIRAVINGQ 120 +AAT+ I R PQ +++LTTF+ ++ + E + AGA+ Y+LKDA EI +R V G+ Sbjct: 63 VAATREITRRWPQIGVIILTTFDDDEYVIEGLKAGARGYMLKDADSHEIVEAVRIVTRGE 122 Query: 121 SGLSPSVAARILDEFKRLRGPRVSAKLPVRDGLTARENEILTLIVEGKSNTEIGEQLHLA 180 + + PS+ ++L EF RL G P+ + LT RE ++L I GKSN EI +QL ++ Sbjct: 123 ALIQPSITRKVLAEFTRLAGGHTPVTSPLTEPLTEREMDVLHGIAAGKSNREIADQLCIS 182 Query: 181 EGTVKNYVSTILEKCQVKNRTELAIKA 207 EGTVKN+VS++L K V++RT+ I+A Sbjct: 183 EGTVKNHVSSLLAKLDVRDRTQAIIRA 209 >ref|YP_001634289.1| response regulator receiver [Chloroflexus aurantiacus J-10-fl] ref|YP_002568470.1| LuxR family two component transcriptional regulator [Chloroflexus sp. Y-400-fl] gb|ABY33900.1| response regulator receiver [Chloroflexus aurantiacus J-10-fl] gb|ACM52145.1| two component transcriptional regulator, LuxR family [Chloroflexus sp. Y-400-fl] Length = 217 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 90/208 (43%), Positives = 141/208 (67%), Gaps = 2/208 (0%) Query: 1 VLIAEDQTLIREGIATLLAQQNDDFEILPGAADGEQAIEFARRYRPDVILMDLQMPRVDG 60 +L+ +DQTL+R+GI TLL + D ++ A +G+QAIE R +PDV+LMD++MP +DG Sbjct: 4 ILLVDDQTLVRQGIQTLLDLEAD-LTVVGTAVNGQQAIELVERLQPDVVLMDIRMPVMDG 62 Query: 61 IAATQRILRELPQTHIVVLTTFETNDLIFEAVSAGAKAYLLKDARMEEIASTIRAVINGQ 120 +AAT+ I R P +++LTTF+ ++ + E + AGA+ Y+LKDA +I ++IR V G+ Sbjct: 63 VAATREICRRWPHIGVIILTTFDDDEYVIEGLKAGARGYMLKDADSSDIVASIRIVARGE 122 Query: 121 SGLSPSVAARILDEFKRLRGPRVSAK-LPVRDGLTARENEILTLIVEGKSNTEIGEQLHL 179 + + PS+ ++L EF RL + + P+ + LT RE ++L I G SN EI +QL + Sbjct: 123 ALIQPSITRKVLAEFSRLAASAPATRPSPLAEPLTEREMDVLHGIAAGHSNREIADQLCI 182 Query: 180 AEGTVKNYVSTILEKCQVKNRTELAIKA 207 +EGTVKNYVS++L K V++RT+ I+A Sbjct: 183 SEGTVKNYVSSLLAKLAVRDRTQAIIRA 210 >ref|YP_004174179.1| NarL family two-component response regulator [Anaerolinea thermophila UNI-1] dbj|BAJ63579.1| NarL family two-component response regulator [Anaerolinea thermophila UNI-1] Length = 217 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 91/207 (43%), Positives = 135/207 (65%), Gaps = 1/207 (0%) Query: 1 VLIAEDQTLIREGIATLLAQQNDDFEILPGAADGEQAIEFARRYRPDVILMDLQMPRVDG 60 VLI +DQ+L REG+ TLL Q D FE++ A++GE+A+ P V+LMDL+MP +DG Sbjct: 5 VLIVDDQSLFREGLKTLLTAQKD-FEVVGEASNGEEALRLIANNHPHVVLMDLRMPVLDG 63 Query: 61 IAATQRILRELPQTHIVVLTTFETNDLIFEAVSAGAKAYLLKDARMEEIASTIRAVINGQ 120 + AT RI P+ +++LTTF+ +DL+F+ + AGA YLLKD + + +RA G+ Sbjct: 64 VRATGRIRELFPEVRVIILTTFDDDDLVFDGLRAGAIGYLLKDVSSDNLFEAVRAAYRGE 123 Query: 121 SGLSPSVAARILDEFKRLRGPRVSAKLPVRDGLTARENEILTLIVEGKSNTEIGEQLHLA 180 L PS+ A+++ EF R P + + + L+ RE E+L L+ EGKSN EI EQL ++ Sbjct: 124 YFLQPSITAKVVAEFARSPRPSSAKMAELTEPLSPREIEVLFLVAEGKSNREIAEQLVIS 183 Query: 181 EGTVKNYVSTILEKCQVKNRTELAIKA 207 EGTVKN++S+IL K K+R + I+A Sbjct: 184 EGTVKNHLSSILSKLGAKDRLQAVIRA 210