BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0126.p (409 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774509.1| ABC transporter permease protein [Bradyrhizobiu... 813 0.0 ref|YP_998272.1| inner-membrane translocator [Verminephrobacter ... 636 e-180 ref|YP_001240758.1| ABC transporter [Bradyrhizobium sp. BTAi1] >... 563 e-158 ref|YP_998040.1| inner-membrane translocator [Verminephrobacter ... 544 e-153 ref|YP_004144538.1| inner-membrane translocator [Mesorhizobium c... 489 e-136 >ref|NP_774509.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53134.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 707 Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/409 (94%), Positives = 399/409 (97%) Query: 1 VLLITNGLTTLNARGGINRMALAGILLVAAMIDIRWQKNRTRIISKVYVAPTYHALPPPP 60 VLLITNGLTT+NARGG+NRMALAGILLVAAM+DIRWQKNRTRIISKVYVAPTYHALPPPP Sbjct: 299 VLLITNGLTTMNARGGVNRMALAGILLVAAMVDIRWQKNRTRIISKVYVAPTYHALPPPP 358 Query: 61 ATEIGQGGPFEQNDKLRDVELIGLGRIEAPEDVILDRNNNLYAGSRHGDIIRFHAPDYQR 120 TEIGQGGPFEQNDKLRDVELIGLGRIEAPEDVILDR++NLYAGSRHGDIIRF APDYQ+ Sbjct: 359 PTEIGQGGPFEQNDKLRDVELIGLGRIEAPEDVILDRHDNLYAGSRHGDIIRFLAPDYQK 418 Query: 121 MEVFAHIGGQPLGMAFDRQDNLYVCIGGMGLYRITPDGTVEKATDETNRSMHSVNDDSRL 180 MEVFAHIGGQPLGMAFDR+DNLY+CIGGMGLYRI PDGTVEKATDETNRSM SVNDDSRL Sbjct: 419 MEVFAHIGGQPLGMAFDREDNLYICIGGMGLYRIKPDGTVEKATDETNRSMRSVNDDSRL 478 Query: 181 RLADDLDITDDGLIFFSEATVRYEMDEWPIDGLEARGNGRIICYDTKTGATHTALRGLKF 240 RLADDLDITDDGLIFFSEATVRYEMDEWPIDGLEARGNGRIICYDT+TGAT T LRGLKF Sbjct: 479 RLADDLDITDDGLIFFSEATVRYEMDEWPIDGLEARGNGRIICYDTRTGATRTELRGLKF 538 Query: 241 PNGICVASDGVSILFAETFGCSIKRLWFAGPKKGQVEVVMDNLPGYPDNINLASDGNYWL 300 PNGICVASDG SILFAETFGCSIKR WFAGPKKG VEVVMDNLPGYPDNINLASDGNYWL Sbjct: 539 PNGICVASDGQSILFAETFGCSIKRYWFAGPKKGAVEVVMDNLPGYPDNINLASDGNYWL 598 Query: 301 ALVGMRSPSLDLAWKMPGFRRRMAKRVPVDEWLFPNINTGCVVKFNEQGKILESFWDLRG 360 ALVGMRSPSLDLAWKMPGFRRRMAKRVPVDEWLFPNINTGCVVKFNEQGKILESFWDLRG Sbjct: 599 ALVGMRSPSLDLAWKMPGFRRRMAKRVPVDEWLFPNINTGCVVKFNEQGKILESFWDLRG 658 Query: 361 ENHPMITSMREHRGYLYLGGIMNNRIGRYKLENADPNFVQYDKRWGKLS 409 ENHPMITSMREHRGYLYLGGI NNRIGRYKL+NADP+FVQYDKRWGKLS Sbjct: 659 ENHPMITSMREHRGYLYLGGIANNRIGRYKLDNADPDFVQYDKRWGKLS 707 >ref|YP_998272.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gb|ABM59254.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 704 Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust. Identities = 309/407 (75%), Positives = 352/407 (86%) Query: 1 VLLITNGLTTLNARGGINRMALAGILLVAAMIDIRWQKNRTRIISKVYVAPTYHALPPPP 60 VLLITNGLT+L+A GG+ RM LA IL++AA+ID+RW KNR RII KVYV+PTY ALPP P Sbjct: 297 VLLITNGLTSLSAPGGVTRMVLATILVLAAVIDVRWLKNRQRIIGKVYVSPTYLALPPAP 356 Query: 61 ATEIGQGGPFEQNDKLRDVELIGLGRIEAPEDVILDRNNNLYAGSRHGDIIRFHAPDYQR 120 G + NDKLRDV IGLGRIEAPEDVILDR++NLYAGSRHGD+IRF APDY+R Sbjct: 357 PCTAEGAGSYALNDKLRDVTPIGLGRIEAPEDVILDRDDNLYAGSRHGDVIRFFAPDYER 416 Query: 121 MEVFAHIGGQPLGMAFDRQDNLYVCIGGMGLYRITPDGTVEKATDETNRSMHSVNDDSRL 180 MEV+AHIGGQPLG+AFDRQDNL+VC+GGMGLYRITP+ VE+ +DETNRS S+NDDSRL Sbjct: 417 MEVYAHIGGQPLGLAFDRQDNLHVCVGGMGLYRITPERVVERVSDETNRSWASINDDSRL 476 Query: 181 RLADDLDITDDGLIFFSEATVRYEMDEWPIDGLEARGNGRIICYDTKTGATHTALRGLKF 240 RLADDLDI DDG IFFSEATVRYEM EWPIDGLEARGNGRIIC+D + G+T T LRGL+F Sbjct: 477 RLADDLDIADDGRIFFSEATVRYEMHEWPIDGLEARGNGRIICHDPRDGSTRTVLRGLRF 536 Query: 241 PNGICVASDGVSILFAETFGCSIKRLWFAGPKKGQVEVVMDNLPGYPDNINLASDGNYWL 300 PNGI + SDG SILFAET+GC IKR WF GPK GQV+ V+ NLPGYPDNIN ASDG+YWL Sbjct: 537 PNGIAIGSDGQSILFAETWGCCIKRYWFDGPKAGQVQTVIGNLPGYPDNINQASDGHYWL 596 Query: 301 ALVGMRSPSLDLAWKMPGFRRRMAKRVPVDEWLFPNINTGCVVKFNEQGKILESFWDLRG 360 ALVGMR P+ DLA +MPGFRRRMA RVP+DEWLFPNINTGCV+KF+E G++LE+ WDL G Sbjct: 597 ALVGMRCPAYDLALRMPGFRRRMALRVPLDEWLFPNINTGCVLKFSEAGQVLETLWDLGG 656 Query: 361 ENHPMITSMREHRGYLYLGGIMNNRIGRYKLENADPNFVQYDKRWGK 407 +NHPMITSMREHRGYLYLGGI NNRIGRY+L ADP+FVQY++RW K Sbjct: 657 QNHPMITSMREHRGYLYLGGISNNRIGRYQLPGADPDFVQYERRWRK 703 >ref|YP_001240758.1| ABC transporter [Bradyrhizobium sp. BTAi1] gb|ABQ36852.1| monosaccharide ABC transporter membrane protein, CUT2 family [Bradyrhizobium sp. BTAi1] Length = 707 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 260/407 (63%), Positives = 319/407 (78%) Query: 1 VLLITNGLTTLNARGGINRMALAGILLVAAMIDIRWQKNRTRIISKVYVAPTYHALPPPP 60 VL++TNG+ + G M L LL+A ID+RW KNR +++SKVYV+PTY LP P Sbjct: 299 VLVMTNGVLRIGLNSGSGPMVLGLTLLLAVFIDVRWLKNRDKLLSKVYVSPTYVELPTPR 358 Query: 61 ATEIGQGGPFEQNDKLRDVELIGLGRIEAPEDVILDRNNNLYAGSRHGDIIRFHAPDYQR 120 +T + GG F ND+L VE+IGLG +E+PEDVILD ++ LY G+RHGDI+RF PDY Sbjct: 359 STSVETGGAFALNDRLGQVEIIGLGEVESPEDVILDDDDYLYCGTRHGDIVRFAPPDYTS 418 Query: 121 MEVFAHIGGQPLGMAFDRQDNLYVCIGGMGLYRITPDGTVEKATDETNRSMHSVNDDSRL 180 EV+AHIGG PLGMAFDR +L+VC+GGMGLY+I V K TDETNRS SV DDSRL Sbjct: 419 WEVYAHIGGSPLGMAFDRAGDLHVCVGGMGLYKIDRARNVGKVTDETNRSAFSVVDDSRL 478 Query: 181 RLADDLDITDDGLIFFSEATVRYEMDEWPIDGLEARGNGRIICYDTKTGATHTALRGLKF 240 RLADDLDI DG I+FSEAT+RYEM +WP+D LE+RGNGRIICYD K+G THTALR L F Sbjct: 479 RLADDLDIAPDGRIYFSEATIRYEMHDWPVDALESRGNGRIICYDPKSGKTHTALRNLIF 538 Query: 241 PNGICVASDGVSILFAETFGCSIKRLWFAGPKKGQVEVVMDNLPGYPDNINLASDGNYWL 300 PNG+C+A DG S+LFAE++ C + RLW AGPK GQVE V+D LPGYPDNIN ASDG+YW Sbjct: 539 PNGVCLAHDGQSVLFAESWACRVSRLWIAGPKAGQVERVLDALPGYPDNINRASDGSYWC 598 Query: 301 ALVGMRSPSLDLAWKMPGFRRRMAKRVPVDEWLFPNINTGCVVKFNEQGKILESFWDLRG 360 A++GMRSP+LDLA +MPGFRRRMA+R+ D+WL+PN+N GCV++FN++G++LES WD Sbjct: 599 AIMGMRSPALDLALRMPGFRRRMARRIAPDQWLYPNLNIGCVIRFNDKGEVLESLWDQGA 658 Query: 361 ENHPMITSMREHRGYLYLGGIMNNRIGRYKLENADPNFVQYDKRWGK 407 +NHPMITSMREHRGYLYLGGI NNRIGR +L+ ADPN+ WG+ Sbjct: 659 KNHPMITSMREHRGYLYLGGITNNRIGRIRLDKADPNWSGMRSYWGQ 705 >ref|YP_998040.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gb|ABM59022.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 706 Score = 544 bits (1402), Expect = e-153, Method: Compositional matrix adjust. Identities = 250/407 (61%), Positives = 310/407 (76%) Query: 1 VLLITNGLTTLNARGGINRMALAGILLVAAMIDIRWQKNRTRIISKVYVAPTYHALPPPP 60 VL++TNG+ + G M L LL A ID+RW K+R +++SK+YV+PTY AL PP Sbjct: 299 VLILTNGVLRIGLNSGSGPMVLGLTLLFAVFIDVRWLKHRDKLLSKLYVSPTYIALRPPR 358 Query: 61 ATEIGQGGPFEQNDKLRDVELIGLGRIEAPEDVILDRNNNLYAGSRHGDIIRFHAPDYQR 120 G G P ND+L V+ IGLG +E+PEDVILD ++ LY G+RHGDI+RF P YQ Sbjct: 359 PIAAGSGSPLALNDRLSGVQTIGLGVVESPEDVILDDDDFLYCGTRHGDIVRFTPPGYQH 418 Query: 121 MEVFAHIGGQPLGMAFDRQDNLYVCIGGMGLYRITPDGTVEKATDETNRSMHSVNDDSRL 180 EVFAHIGG PLGM FD++ NL VC+GGMGLYRI D + K TDETNRS SV DDSRL Sbjct: 419 SEVFAHIGGTPLGMTFDKERNLLVCVGGMGLYRIGVDRKLSKLTDETNRSAFSVIDDSRL 478 Query: 181 RLADDLDITDDGLIFFSEATVRYEMDEWPIDGLEARGNGRIICYDTKTGATHTALRGLKF 240 RLADDLDI DG +FFSEAT+RYEM +WP+D LE+RGNGRIICYD ++G T T +R L F Sbjct: 479 RLADDLDIAPDGRVFFSEATIRYEMHDWPVDALESRGNGRIICYDPRSGKTQTVVRNLVF 538 Query: 241 PNGICVASDGVSILFAETFGCSIKRLWFAGPKKGQVEVVMDNLPGYPDNINLASDGNYWL 300 PNG+C+A DG S+LFAE++ C+I R W +GPK G+ E ++D LPGYPDNIN ASDG YW+ Sbjct: 539 PNGVCLAHDGQSMLFAESWACTISRYWISGPKAGRTECLIDRLPGYPDNINRASDGTYWV 598 Query: 301 ALVGMRSPSLDLAWKMPGFRRRMAKRVPVDEWLFPNINTGCVVKFNEQGKILESFWDLRG 360 AL+GMRSP+LD+A +MPGFRRRMA+R+ D+WL+PN+N GCV +F++QG ILES WD Sbjct: 599 ALMGMRSPALDVALRMPGFRRRMARRIAPDQWLYPNLNIGCVARFDDQGNILESMWDQGA 658 Query: 361 ENHPMITSMREHRGYLYLGGIMNNRIGRYKLENADPNFVQYDKRWGK 407 +NHPMITSMREH+G+LYLGGI NNRIGR +LE ADP + Y WG+ Sbjct: 659 KNHPMITSMREHKGWLYLGGITNNRIGRVRLERADPGWSSYQSYWGR 705 >ref|YP_004144538.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV14488.1| inner-membrane translocator [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 705 Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust. Identities = 236/407 (57%), Positives = 298/407 (73%), Gaps = 2/407 (0%) Query: 1 VLLITNGLTTLNARGGINRMALAGILLVAAMIDIRWQKNRTRIISKVYVAPTYHALPPPP 60 VL+++N L L G +N + L +LL++ ++D+RW KNR +I+ VY++PT+ +P Sbjct: 299 VLVLSNSLLALAVPGPVNFLILGIVLLLSVLLDVRWVKNRHKILRSVYISPTFAKMPQ-- 356 Query: 61 ATEIGQGGPFEQNDKLRDVELIGLGRIEAPEDVILDRNNNLYAGSRHGDIIRFHAPDYQR 120 A G P ND+L+DV +IGLG ++ EDVI DR + LY GSR G+I+RF P Y Sbjct: 357 AISTAPGAPMAVNDRLKDVGVIGLGVLDGAEDVIFDRQDRLYTGSRQGEILRFQPPHYTD 416 Query: 121 MEVFAHIGGQPLGMAFDRQDNLYVCIGGMGLYRITPDGTVEKATDETNRSMHSVNDDSRL 180 EVFAHIGG PLGMAFDR DNL +C+ GMGLY+++P G V+ T ETNRS+ SV DDS + Sbjct: 417 SEVFAHIGGSPLGMAFDRDDNLVICVAGMGLYQVSPAGDVKLLTAETNRSLTSVVDDSTM 476 Query: 181 RLADDLDITDDGLIFFSEATVRYEMDEWPIDGLEARGNGRIICYDTKTGATHTALRGLKF 240 +LADD DI DG I FSEATVR+EM +W D LE+RGNGRII +D K+G+T T L L F Sbjct: 477 KLADDCDILPDGRIVFSEATVRFEMHDWYADALESRGNGRIIVHDPKSGSTRTLLSNLVF 536 Query: 241 PNGICVASDGVSILFAETFGCSIKRLWFAGPKKGQVEVVMDNLPGYPDNINLASDGNYWL 300 PNGIC A DG S+LFAE++ C I R +F GPKKGQVE V++ LPGYPDNIN ASDG YWL Sbjct: 537 PNGICTAFDGQSVLFAESWACRISRYYFDGPKKGQVERVIEGLPGYPDNINRASDGTYWL 596 Query: 301 ALVGMRSPSLDLAWKMPGFRRRMAKRVPVDEWLFPNINTGCVVKFNEQGKILESFWDLRG 360 AL+GMR+P+LDL+ +MP FRRRMA+RV D WL PN+NTGCV++F+E G+ILES WD G Sbjct: 597 ALMGMRTPALDLSLEMPSFRRRMARRVSEDAWLMPNLNTGCVLRFDENGQILESLWDQAG 656 Query: 361 ENHPMITSMREHRGYLYLGGIMNNRIGRYKLENADPNFVQYDKRWGK 407 E HPMITSMREH+G LYL GI NNR+G L+ DP++ D WGK Sbjct: 657 EKHPMITSMREHKGILYLCGIFNNRMGTLPLKGVDPDWFSSDSYWGK 703