BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0111.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001976664.1| hypothetical protein RHECIAT_CH0000493 [Rhiz... 77 3e-12 ref|YP_001691228.1| hypothetical protein M446_6970 [Methylobacte... 69 5e-10 ref|ZP_01047458.1| hypothetical protein NB311A_06081 [Nitrobacte... 44 0.025 ref|YP_004263102.1| DNA gyrase subunit A [Cellulophaga lytica DS... 42 0.099 ref|XP_817637.1| trans-sialidase [Trypanosoma cruzi strain CL Br... 42 0.11 >ref|YP_001976664.1| hypothetical protein RHECIAT_CH0000493 [Rhizobium etli CIAT 652] gb|ACE89486.1| hypothetical protein RHECIAT_CH0000493 [Rhizobium etli CIAT 652] Length = 282 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 14/202 (6%) Query: 18 DGPDGSSVAKLRNAYVGAIEAVHGLRGKRTEADGSGRFTALGLSEHVAEYAMTGQIPAVR 77 D D L Y A +R KR E + +G++T G+ + + + A++ +P +R Sbjct: 29 DSGDNGPFTTLEKLYAEIQSAPERIRAKRAELEKTGKYTPAGIKDMLKQIALSETVPDIR 88 Query: 78 RARSV-VERVRAEIADRRSKLALPKPTDEERRD------HEEIRAAMRGMSDEQRKNFIA 130 RA + V + R EI RR+ KP + + D +E+RA +R M+ ++R ++ Sbjct: 89 RAAAQQVSKFRREIDSRRAAF---KPFEHDPNDLVGEMRRQEVRAWLRTMTPDERTKAVS 145 Query: 131 ENRHNSTVAAAIANAAIPA-LVGLDAMQHQHIVAEQLQREHGQTLAELADLEEVVGVVDR 189 V AAI+ +P L GL + +++ +G +A L +L+E V V+R Sbjct: 146 HASDPFIVEAAIS---VPVELTGLLPSTRDRLSQLLVEQRYGDEIAGLNELDEAVKTVER 202 Query: 190 VTDLAREELREIIGVSREVFEG 211 D AR+++REIIG+ F+ Sbjct: 203 AVDGARDDVREIIGMFPHDFDA 224 >ref|YP_001691228.1| hypothetical protein M446_6970 [Methylobacterium sp. 4-46] gb|ACA21203.1| hypothetical protein M446_6970 [Methylobacterium sp. 4-46] Length = 231 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 11/209 (5%) Query: 18 DGPDGSSV-AKLRNAYVGA--IEAVHGLRGKRTEADGSGRFTALGLSEHVAEYAMTGQIP 74 D GS V A LR+A A I A G G+RT D T G + + A + Sbjct: 28 DSQTGSPVVAALRSATSRAAEISAAFGRIGERTRRDP--HLTEAGKRDKITTVATRDTLG 85 Query: 75 AVRRARSVVERVRAEIADRRSKLALPKPTD--EERRDHEEIRAAMRGMSDEQRKNFIAEN 132 +RR + V V+A++A +R+ + + TD EE R +E+RA +R + D ++ I Sbjct: 86 PLRRTQREVAEVKAQVAAKRAACVVRRGTDPVEEMR-RQEVRAFLRSLPDPGKR--IGAA 142 Query: 133 RHNSTVAAAIANAAIPALVGLDAMQHQHIVAEQLQREHGQTLAELADLEEVVGVVDRVTD 192 + +A A+ A+ P L G+DA +Q I E ++ EHG LAEL L+EV+ + + Sbjct: 143 MQDPEIARAVVEAS-PMLSGMDAANYQRIHDEVVKAEHGDVLAELDGLKEVIQYAENIMA 201 Query: 193 LAREELREIIGVSREVFEGVARVGEAGDG 221 +R+ +G +RE + +A + D Sbjct: 202 FCHNSVRDTLGENRETDKLIADFNKEYDA 230 >ref|ZP_01047458.1| hypothetical protein NB311A_06081 [Nitrobacter sp. Nb-311A] gb|EAQ34563.1| hypothetical protein NB311A_06081 [Nitrobacter sp. Nb-311A] Length = 251 Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 16/178 (8%) Query: 32 YVGAIEA-VHGLRGKRTEADGSGRFTALGLSEHVAEYAMTGQIPAVRRARSVVERVRAEI 90 ++ AI+A + +RT+ SG + G++E + A +P ++RA +R ++ I Sbjct: 30 HIDAIKAAITATSNQRTQLSDSGVHSPKGIAEQIRVKAAKDLVPILKRAAEHTDRTKSAI 89 Query: 91 ADRRSKLALPK--PTDE-ERRDHEEIRAAMRGMSDEQRKNFIAENRHNSTVAAAIANAAI 147 RR L PK P D EIRA ++ +S R IA + VA A +A Sbjct: 90 DQRRKNLTTPKIDPIDSVAEMQRAEIRANLKSLSAGDR---IAAATKDPRVADAYLSA-- 144 Query: 148 PA-LVGLDAMQHQHI---VAEQLQREHGQTLAELADLEEVVGVVDRVTDLAREELREI 201 PA L G + + I VA+Q HG L E+ + V+D V + +LR++ Sbjct: 145 PAFLSGSNETERAQIDDRVAKQF---HGDALQEIDAERGAIAVLDAVIGVGLTDLRKV 199 >ref|YP_004263102.1| DNA gyrase subunit A [Cellulophaga lytica DSM 7489] gb|ADY30231.1| DNA gyrase, A subunit [Cellulophaga lytica DSM 7489] Length = 851 Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust. Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 28/165 (16%) Query: 54 RFTALGLSEHVAEYAMTGQIPAVRRARSVVERV---RAEIADRRSKLALPKPTDEERRDH 110 ++TAL S V A+ P + + ++ R E+ RR+K L K D R H Sbjct: 319 KYTALQTSFSVNNIALVNGRPQLLNVKEMIHYFVEHRHEVVVRRTKFELKKAED---RAH 375 Query: 111 ------------EEIRAAMRGMS--DEQRKNFIAENRHNSTVAAAIANAAIPALVGLDAM 156 +E+ A +RG S DE R+N I + A AI + L GL+ Sbjct: 376 ILEGLIIASDNIDEVIAIIRGSSNADEARENLIKRFELSEIQAKAIVEMRLRQLTGLEQ- 434 Query: 157 QHQHIVAEQLQREHGQTLAELADLEEVVGVVDRVTDLAREELREI 201 ++L+ E+ + + +ADL++++ +R + ++EL E+ Sbjct: 435 -------DKLRAEYDEIIKTIADLKDILANEERRMQIIKDELLEV 472 >ref|XP_817637.1| trans-sialidase [Trypanosoma cruzi strain CL Brener] gb|EAN95786.1| trans-sialidase, putative [Trypanosoma cruzi] Length = 986 Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 53/186 (28%), Positives = 76/186 (40%), Gaps = 25/186 (13%) Query: 18 DGPDGSSVAKLRNAYVGAIEAVHGLRGKRTEADGSGRFTALGLSEHVAEYAMTGQIP-AV 76 + P+GS A + + G+ HG R + TE DGSG + S V A +G V Sbjct: 798 EAPEGSDAAAVSSGGRGS----HGTREEETETDGSGELASPPASSSVGTSAHSGDDGMGV 853 Query: 77 RRARSVVERVRAEIADRRSKLALPKPTDEERRDHEEIRAAMRGMSDEQRKNFIA---ENR 133 R S+ E V + +PK D ER +EE + G ++ Q + A EN Sbjct: 854 REGTSLQEEVPPPLGTED----IPK-ADVERPIYEEEATSPEGATERQTQETTAPLVENG 908 Query: 134 HNSTVAAAIANAA-------IPALVGLDAMQHQHIVAEQLQREHGQTLAELADLEE--VV 184 V A NA+ IP+ ++ I+ E EH L+ +A E V Sbjct: 909 DGEDVGTAPGNASTQPGETKIPSESNATSLSDHGILPEH---EHLSELSGMALFAESTVH 965 Query: 185 GVVDRV 190 G V RV Sbjct: 966 GCVSRV 971