BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0094.0092.p         (230 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001202939.1| pyrimidine 5-nucleotidase [Bradyrhizobium sp...   399   e-109
ref|YP_001243101.1| HAD-superfamily hydrolase [Bradyrhizobium sp...   399   e-109
ref|NP_774743.1| hypothetical protein blr8103 [Bradyrhizobium ja...   399   e-109
ref|YP_004107077.1| pyrimidine 5'-nucleotidase [Rhodopseudomonas...   386   e-105
ref|YP_567215.1| pyrimidine 5-nucleotidase [Rhodopseudomonas pal...   384   e-105

>ref|YP_001202939.1| pyrimidine 5-nucleotidase [Bradyrhizobium sp. ORS 278]
 emb|CAL74701.1| putative HAD-superfamily hydrolase; putative Pyrimidine
           5-nucleotidase [Bradyrhizobium sp. ORS 278]
          Length = 231

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/228 (83%), Positives = 207/228 (90%)

Query: 1   MTKTSRSFGHVETWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLKISPEEARRLQKDYY 60
           MTK+ R+F HV+TWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLK+   EARR+QKDYY
Sbjct: 1   MTKSPRAFDHVDTWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLKVDAAEARRIQKDYY 60

Query: 61  LRYGTTMRGMMTEHGVQADDYLAYVHRIDHSPLQPNPAMGAAIAKLPGRKLILTNGSVDH 120
            RYGTTMRGMMTEHGV ADD+LAYVH+IDHSPL+PNPAMGAAI +LPGRKLILTNGSVDH
Sbjct: 61  KRYGTTMRGMMTEHGVHADDFLAYVHKIDHSPLEPNPAMGAAIEQLPGRKLILTNGSVDH 120

Query: 121 VDAVLGRLGISNHFDGVFDIVAADLEPKPAPQTYQKFLRLHDVDPARAAMFEDLARNLVV 180
           VDAVL RLGI+ HF GVFDI+AA+L PKPA +TY KFL LH VDP RAAMFEDLARNLVV
Sbjct: 121 VDAVLARLGIAGHFHGVFDIIAAELTPKPARETYDKFLALHAVDPTRAAMFEDLARNLVV 180

Query: 181 PHELGMTTVLVVPDGSQEVVRETWELEGRDAAYVDHVTDDLTGFLQRL 228
           PH+LGMTTVLVVPDG++EVVRE WEL GRD  +VDHVTDDLTGFLQRL
Sbjct: 181 PHDLGMTTVLVVPDGTKEVVREDWELSGRDDPHVDHVTDDLTGFLQRL 228


>ref|YP_001243101.1| HAD-superfamily hydrolase [Bradyrhizobium sp. BTAi1]
 gb|ABQ39195.1| putative HAD-superfamily hydrolase [Bradyrhizobium sp. BTAi1]
          Length = 231

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/228 (83%), Positives = 206/228 (90%)

Query: 1   MTKTSRSFGHVETWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLKISPEEARRLQKDYY 60
           MTK  RSF HV+TWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLK+  +EARR+QKDYY
Sbjct: 1   MTKDPRSFDHVDTWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLKVDADEARRIQKDYY 60

Query: 61  LRYGTTMRGMMTEHGVQADDYLAYVHRIDHSPLQPNPAMGAAIAKLPGRKLILTNGSVDH 120
            RYGTTMRGMMTEHGV ADD+LAYVH+IDHSPL+PNP MGAAI KLPGRKLILTNGSVDH
Sbjct: 61  RRYGTTMRGMMTEHGVHADDFLAYVHKIDHSPLEPNPDMGAAIEKLPGRKLILTNGSVDH 120

Query: 121 VDAVLGRLGISNHFDGVFDIVAADLEPKPAPQTYQKFLRLHDVDPARAAMFEDLARNLVV 180
           VDAVL RLGI+ HF GVFDI+AA+L PKPA +TY KFL LH VDP RAAMFEDLARNLVV
Sbjct: 121 VDAVLSRLGIAGHFHGVFDIIAAELTPKPARETYDKFLELHAVDPTRAAMFEDLARNLVV 180

Query: 181 PHELGMTTVLVVPDGSQEVVRETWELEGRDAAYVDHVTDDLTGFLQRL 228
           PH+LGMTTVLVVPDG++EVVRE WEL GRD  +VDHVTDDLTGFLQRL
Sbjct: 181 PHDLGMTTVLVVPDGTKEVVREDWELSGRDDPHVDHVTDDLTGFLQRL 228


>ref|NP_774743.1| hypothetical protein blr8103 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53368.1| blr8103 [Bradyrhizobium japonicum USDA 110]
          Length = 230

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 189/225 (84%), Positives = 206/225 (91%)

Query: 6   RSFGHVETWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLKISPEEARRLQKDYYLRYGT 65
           R+F HV+TWVFDLDNTLYPHHVNLWQQVDARIGEFV NWL +SPEEAR +QKDYY R+GT
Sbjct: 5   RAFTHVDTWVFDLDNTLYPHHVNLWQQVDARIGEFVCNWLNVSPEEARHIQKDYYRRFGT 64

Query: 66  TMRGMMTEHGVQADDYLAYVHRIDHSPLQPNPAMGAAIAKLPGRKLILTNGSVDHVDAVL 125
           TMRGMMT HGV+ADDYLAYVH+IDHSPL+PNPA+GAAIAKLPGRKLILTNGSVDHV AVL
Sbjct: 65  TMRGMMTLHGVRADDYLAYVHKIDHSPLEPNPALGAAIAKLPGRKLILTNGSVDHVGAVL 124

Query: 126 GRLGISNHFDGVFDIVAADLEPKPAPQTYQKFLRLHDVDPARAAMFEDLARNLVVPHELG 185
            RLG++ HFDGVFDI+AA+ EPKPAPQTY+KFL  H VDPARAAMFEDLARNL VPHELG
Sbjct: 125 ARLGLATHFDGVFDIIAAEFEPKPAPQTYRKFLGDHAVDPARAAMFEDLARNLTVPHELG 184

Query: 186 MTTVLVVPDGSQEVVRETWELEGRDAAYVDHVTDDLTGFLQRLKP 230
           MTTVLVVPDG++EVVRE WELEGRDAA+VDHVTDDL GFL  L P
Sbjct: 185 MTTVLVVPDGTKEVVREDWELEGRDAAHVDHVTDDLAGFLAGLSP 229


>ref|YP_004107077.1| pyrimidine 5'-nucleotidase [Rhodopseudomonas palustris DX-1]
 gb|ADU42344.1| pyrimidine 5'-nucleotidase [Rhodopseudomonas palustris DX-1]
          Length = 233

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/229 (81%), Positives = 201/229 (87%)

Query: 1   MTKTSRSFGHVETWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLKISPEEARRLQKDYY 60
           M    R+F HVETWVFDLDNTLYPHH+NLWQQVDARI +FV+ WLK++PEEA R+QKDYY
Sbjct: 2   MQLGKRNFDHVETWVFDLDNTLYPHHLNLWQQVDARIRDFVAAWLKVTPEEAFRIQKDYY 61

Query: 61  LRYGTTMRGMMTEHGVQADDYLAYVHRIDHSPLQPNPAMGAAIAKLPGRKLILTNGSVDH 120
            RYGTTMRGMMTEHGV ADDYLAYVH IDHSPL+PNPAMG AI +LPGRKLILTNGSV H
Sbjct: 62  KRYGTTMRGMMTEHGVHADDYLAYVHAIDHSPLEPNPAMGDAIERLPGRKLILTNGSVAH 121

Query: 121 VDAVLGRLGISNHFDGVFDIVAADLEPKPAPQTYQKFLRLHDVDPARAAMFEDLARNLVV 180
              VL RLGI +HF+ VFDIVAADLEPKPAPQTY++FL  H V PARAAMFEDLARNL V
Sbjct: 122 AGKVLERLGIGHHFEAVFDIVAADLEPKPAPQTYRRFLDRHGVAPARAAMFEDLARNLTV 181

Query: 181 PHELGMTTVLVVPDGSQEVVRETWELEGRDAAYVDHVTDDLTGFLQRLK 229
           PH+LGMTTVLVVPDGSQEVVRE WELEGRDAAYVDHVTDDLTGFL+ L 
Sbjct: 182 PHQLGMTTVLVVPDGSQEVVREDWELEGRDAAYVDHVTDDLTGFLKTLS 230


>ref|YP_567215.1| pyrimidine 5-nucleotidase [Rhodopseudomonas palustris BisB5]
 gb|ABE37314.1| Pyrimidine 5-nucleotidase [Rhodopseudomonas palustris BisB5]
          Length = 233

 Score =  384 bits (985), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/230 (80%), Positives = 205/230 (89%), Gaps = 1/230 (0%)

Query: 1   MTKTS-RSFGHVETWVFDLDNTLYPHHVNLWQQVDARIGEFVSNWLKISPEEARRLQKDY 59
           MT+ S R FGHV+TWVFDLDNTLYPHHVNLWQQVD RI +FV++WLK++PEEA R+QKDY
Sbjct: 1   MTELSKRGFGHVDTWVFDLDNTLYPHHVNLWQQVDGRIRDFVADWLKVTPEEAFRIQKDY 60

Query: 60  YLRYGTTMRGMMTEHGVQADDYLAYVHRIDHSPLQPNPAMGAAIAKLPGRKLILTNGSVD 119
           Y RYGTTMRGMM+EHGV ADDYLAYVH IDHSPL+PNPAMGAAIA+LPGRKLILTNGS D
Sbjct: 61  YKRYGTTMRGMMSEHGVSADDYLAYVHAIDHSPLEPNPAMGAAIAQLPGRKLILTNGSTD 120

Query: 120 HVDAVLGRLGISNHFDGVFDIVAADLEPKPAPQTYQKFLRLHDVDPARAAMFEDLARNLV 179
           H   VL RLGI +HF+ VFDIVAA+LEPKPA QTY +FL LH VDPARAAMFEDLARNL 
Sbjct: 121 HAGKVLERLGIGHHFEAVFDIVAAELEPKPAAQTYHRFLTLHGVDPARAAMFEDLARNLA 180

Query: 180 VPHELGMTTVLVVPDGSQEVVRETWELEGRDAAYVDHVTDDLTGFLQRLK 229
           VPH+LGMTTVLVVPDGS++VVRE WELEGRDAA+VD+VT+DLTGFL  L 
Sbjct: 181 VPHQLGMTTVLVVPDGSKDVVREDWELEGRDAAHVDYVTEDLTGFLAGLN 230