BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0089.p (388 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774746.1| succinyl-diaminopimelate desuccinylase [Bradyrh... 699 0.0 ref|YP_001202937.1| succinyl-diaminopimelate desuccinylase [Brad... 686 0.0 ref|YP_001243103.1| succinyl-diaminopimelate desuccinylase [Brad... 683 0.0 ref|YP_578883.1| succinyl-diaminopimelate desuccinylase [Nitroba... 659 0.0 sp|Q1QH74.2|DAPE_NITHX RecName: Full=Succinyl-diaminopimelate de... 659 0.0 >ref|NP_774746.1| succinyl-diaminopimelate desuccinylase [Bradyrhizobium japonicum USDA 110] sp|Q89BP2.1|DAPE_BRAJA RecName: Full=Succinyl-diaminopimelate desuccinylase; Short=SDAP desuccinylase; AltName: Full=N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase dbj|BAC53371.1| succinyl-diaminopimelate desuccinylase [Bradyrhizobium japonicum USDA 110] Length = 388 Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/388 (85%), Positives = 361/388 (93%) Query: 1 MSDAVSIARDLVRCPSVTPADAGALGVLENLLKTAGFEVHRVTFSEPGTADIDNLYARIG 60 M+DA+SIARDL+RCPSVTPADAGALGVLEN L AGF HRVTFSEPGTAD+DNLYARIG Sbjct: 1 MTDALSIARDLIRCPSVTPADAGALGVLENALNAAGFTCHRVTFSEPGTADVDNLYARIG 60 Query: 61 SSAPHITFAGHTDVVPPGDEAAWTLGAFSGEVKDGYLYGRGAVDMKGGIACSVAAVLQYL 120 S PHITFAGHTDVVP GDE+AW++GAFSGEVKDG+L+GRGAVDMKGGIACSVAAVL++L Sbjct: 61 SEGPHITFAGHTDVVPAGDESAWSVGAFSGEVKDGFLHGRGAVDMKGGIACSVAAVLEHL 120 Query: 121 QDHGGKPQENGNGSISFLITGDEEDVSINGTVKLLKWCAERGEKFDHCVLGEPSNVEVLG 180 +GGKP+ +G GSISFLITGDEEDVSINGT+KLLKW AERGE FDHCVLGEPSNVE LG Sbjct: 121 AANGGKPRGDGTGSISFLITGDEEDVSINGTIKLLKWAAERGETFDHCVLGEPSNVETLG 180 Query: 181 DMIKIGRRGSQSGTLVVDGVQGHVAYPHRASNPVPDISRLIVALSDEPLDRGSAQFQASN 240 D IK+GRRGSQSGTL VDGVQGHVAYPHRASNPVPDISRLIVA+SDEPLD GSAQFQASN Sbjct: 181 DTIKVGRRGSQSGTLYVDGVQGHVAYPHRASNPVPDISRLIVAISDEPLDHGSAQFQASN 240 Query: 241 LEFTTVDVGNTASNVIPGQARAKFNIRYNDNHTQESLRQLVDERLAKACGNRIRAHIDWM 300 LEFT+VDVGN A+NVIPG+ARAKFNIRYNDNHTQ SLR+LV+ RLAKACGNRI+A I W Sbjct: 241 LEFTSVDVGNKANNVIPGEARAKFNIRYNDNHTQASLRELVETRLAKACGNRIKARIVWE 300 Query: 301 PSNSNVFVTQPGPFTDLAVAAIEEITGRRPELSTSGGTSDARFISSYCPVIEFGLVGQTM 360 PSNSNVFVT+PGPFTDLAV+AIEEITGR+PELSTSGGTSDARFISSYCPVIEFGLVGQTM Sbjct: 301 PSNSNVFVTKPGPFTDLAVSAIEEITGRKPELSTSGGTSDARFISSYCPVIEFGLVGQTM 360 Query: 361 HQVDERTPVADLEKLTKIYRGVLERYFG 388 HQVDER PV DLEKLT++YRG+L RYFG Sbjct: 361 HQVDERVPVKDLEKLTQVYRGILTRYFG 388 >ref|YP_001202937.1| succinyl-diaminopimelate desuccinylase [Bradyrhizobium sp. ORS 278] sp|A4YLC3.1|DAPE_BRASO RecName: Full=Succinyl-diaminopimelate desuccinylase; Short=SDAP desuccinylase; AltName: Full=N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase emb|CAL74699.1| Succinyl-diaminopimelate desuccinylase (SDAP) [Bradyrhizobium sp. ORS 278] Length = 384 Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/387 (84%), Positives = 357/387 (92%), Gaps = 4/387 (1%) Query: 1 MSDAVSIARDLVRCPSVTPADAGALGVLENLLKTAGFEVHRVTFSEPGTADIDNLYARIG 60 M+DA++I RDL+RCPSVTPADAGALGVLE LLK AGF HRVTFSEPGTADIDNLYARIG Sbjct: 1 MTDALTITRDLIRCPSVTPADAGALGVLEALLKQAGFTTHRVTFSEPGTADIDNLYARIG 60 Query: 61 SSAPHITFAGHTDVVPPGDEAAWTLGAFSGEVKDGYLYGRGAVDMKGGIACSVAAVLQYL 120 + PHITFAGHTDVVPPGDEA+W+L AFSGEVKDGY+YGRGAVDMKGGIACSVAA L YL Sbjct: 61 TEGPHITFAGHTDVVPPGDEASWSLPAFSGEVKDGYIYGRGAVDMKGGIACSVAAALDYL 120 Query: 121 QDHGGKPQENGNGSISFLITGDEEDVSINGTVKLLKWCAERGEKFDHCVLGEPSNVEVLG 180 +DHG +P+ GSISFLITGDEEDVSINGT+KLL+W A+RGE FDHCVLGEPSN EV+G Sbjct: 121 RDHGSQPK----GSISFLITGDEEDVSINGTIKLLQWAADRGETFDHCVLGEPSNQEVMG 176 Query: 181 DMIKIGRRGSQSGTLVVDGVQGHVAYPHRASNPVPDISRLIVALSDEPLDRGSAQFQASN 240 D IKIGRRGSQSGTL+V+G QGHVAYPHRASNPVPDISRLIVALSDEPLD GSAQFQ SN Sbjct: 177 DCIKIGRRGSQSGTLIVEGKQGHVAYPHRASNPVPDISRLIVALSDEPLDNGSAQFQPSN 236 Query: 241 LEFTTVDVGNTASNVIPGQARAKFNIRYNDNHTQESLRQLVDERLAKACGNRIRAHIDWM 300 LEFTTVDVGNTA+NVI G ARAKFNIRYND HTQESLR LV++RLAKACGNRIRAHIDW+ Sbjct: 237 LEFTTVDVGNTATNVIAGIARAKFNIRYNDCHTQESLRALVEQRLAKACGNRIRAHIDWL 296 Query: 301 PSNSNVFVTQPGPFTDLAVAAIEEITGRRPELSTSGGTSDARFISSYCPVIEFGLVGQTM 360 PSNS+VF+T+PGPFTDLAVAAIEE+TGR+PELST+GGTSDARFISSYCPVIEFGLVGQTM Sbjct: 297 PSNSDVFLTKPGPFTDLAVAAIEEVTGRKPELSTTGGTSDARFISSYCPVIEFGLVGQTM 356 Query: 361 HQVDERTPVADLEKLTKIYRGVLERYF 387 HQ+DER VAD+ LTKIYRG+L+RYF Sbjct: 357 HQIDERASVADIATLTKIYRGILDRYF 383 >ref|YP_001243103.1| succinyl-diaminopimelate desuccinylase [Bradyrhizobium sp. BTAi1] sp|A5ESQ3.1|DAPE_BRASB RecName: Full=Succinyl-diaminopimelate desuccinylase; Short=SDAP desuccinylase; AltName: Full=N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase gb|ABQ39197.1| succinyldiaminopimelate desuccinylase [Bradyrhizobium sp. BTAi1] Length = 384 Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/387 (83%), Positives = 355/387 (91%), Gaps = 4/387 (1%) Query: 1 MSDAVSIARDLVRCPSVTPADAGALGVLENLLKTAGFEVHRVTFSEPGTADIDNLYARIG 60 M+DA++I RDL+RCPSVTPADAGALGVLE LLK AGF HR+TFSE GTADIDNLYARIG Sbjct: 1 MTDALTITRDLIRCPSVTPADAGALGVLEALLKQAGFTTHRITFSEAGTADIDNLYARIG 60 Query: 61 SSAPHITFAGHTDVVPPGDEAAWTLGAFSGEVKDGYLYGRGAVDMKGGIACSVAAVLQYL 120 + PHITFAGHTDVVPPGDEAAW+L AFSGEV+DGY+YGRGAVDMKGGIACSVAA L YL Sbjct: 61 TEGPHITFAGHTDVVPPGDEAAWSLPAFSGEVRDGYIYGRGAVDMKGGIACSVAAALDYL 120 Query: 121 QDHGGKPQENGNGSISFLITGDEEDVSINGTVKLLKWCAERGEKFDHCVLGEPSNVEVLG 180 +DH G+P+ GSISFLITGDEEDVSINGT+KLL+W AERGEKFDHCVLGEPSN EV+G Sbjct: 121 RDHDGQPK----GSISFLITGDEEDVSINGTIKLLQWAAERGEKFDHCVLGEPSNQEVMG 176 Query: 181 DMIKIGRRGSQSGTLVVDGVQGHVAYPHRASNPVPDISRLIVALSDEPLDRGSAQFQASN 240 D IKIGRRGSQSGTL+V+G QGHVAYPHRA NPVPDISRLIVALSDEPLD GSAQFQ SN Sbjct: 177 DCIKIGRRGSQSGTLIVEGRQGHVAYPHRAENPVPDISRLIVALSDEPLDHGSAQFQPSN 236 Query: 241 LEFTTVDVGNTASNVIPGQARAKFNIRYNDNHTQESLRQLVDERLAKACGNRIRAHIDWM 300 LEFT+VDVGNTASNVIPG ARAKFNIRYND HTQ+SLR LV+ERLAKACGNRIRAHIDW+ Sbjct: 237 LEFTSVDVGNTASNVIPGLARAKFNIRYNDCHTQDSLRALVEERLAKACGNRIRAHIDWL 296 Query: 301 PSNSNVFVTQPGPFTDLAVAAIEEITGRRPELSTSGGTSDARFISSYCPVIEFGLVGQTM 360 PSNS VF+T+PGPFTDLAVAAIE +TGR+PELST+GGTSDARFI+SYCPVIEFGLVGQTM Sbjct: 297 PSNSKVFLTKPGPFTDLAVAAIESVTGRKPELSTTGGTSDARFIASYCPVIEFGLVGQTM 356 Query: 361 HQVDERTPVADLEKLTKIYRGVLERYF 387 HQ+DER VAD+ LTKIYRG+L+RYF Sbjct: 357 HQIDERASVADIATLTKIYRGILDRYF 383 >ref|YP_578883.1| succinyl-diaminopimelate desuccinylase [Nitrobacter hamburgensis X14] gb|ABE64423.1| succinyldiaminopimelate desuccinylase [Nitrobacter hamburgensis X14] Length = 411 Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/386 (80%), Positives = 346/386 (89%) Query: 2 SDAVSIARDLVRCPSVTPADAGALGVLENLLKTAGFEVHRVTFSEPGTADIDNLYARIGS 61 +DA+SIARDLVRCPSVTPADAGALGVLE LL AGFEVHRVTFSEPG ADIDNLYARIG+ Sbjct: 25 TDALSIARDLVRCPSVTPADAGALGVLEKLLGDAGFEVHRVTFSEPGAADIDNLYARIGA 84 Query: 62 SAPHITFAGHTDVVPPGDEAAWTLGAFSGEVKDGYLYGRGAVDMKGGIACSVAAVLQYLQ 121 + PHI FAGHTDVVPPGDE+AWT GAFSGEVKDG+LYGRG VDMKGGIACS AA L+YL+ Sbjct: 85 TGPHIAFAGHTDVVPPGDESAWTHGAFSGEVKDGFLYGRGTVDMKGGIACSAAATLEYLE 144 Query: 122 DHGGKPQENGNGSISFLITGDEEDVSINGTVKLLKWCAERGEKFDHCVLGEPSNVEVLGD 181 HGG+P ++GNGSISFLITGDEED+++NGTVKL++W A RGEKFDHCVLGEPSNV LGD Sbjct: 145 AHGGRPGKDGNGSISFLITGDEEDIAVNGTVKLMQWAAARGEKFDHCVLGEPSNVAELGD 204 Query: 182 MIKIGRRGSQSGTLVVDGVQGHVAYPHRASNPVPDISRLIVALSDEPLDRGSAQFQASNL 241 IKIGRRGSQSGTL V+GVQGHVAYPHRASNP+PDI+ LI AL EPLD+GSAQFQ SNL Sbjct: 205 CIKIGRRGSQSGTLYVEGVQGHVAYPHRASNPIPDIAALITALVSEPLDQGSAQFQPSNL 264 Query: 242 EFTTVDVGNTASNVIPGQARAKFNIRYNDNHTQESLRQLVDERLAKACGNRIRAHIDWMP 301 FT+VDVGN A+NVIPGQARAKFN+R+ND+H QESLR L++ R+AK GNRIR I W P Sbjct: 265 AFTSVDVGNPANNVIPGQARAKFNVRFNDHHNQESLRALIEARVAKVSGNRIRTRIVWEP 324 Query: 302 SNSNVFVTQPGPFTDLAVAAIEEITGRRPELSTSGGTSDARFISSYCPVIEFGLVGQTMH 361 SN++VFVT+PGPFTDL VAAIEE+TGRRPEL+T GGTSDARFI YCPVIEFGLVGQTMH Sbjct: 325 SNADVFVTRPGPFTDLVVAAIEEVTGRRPELNTGGGTSDARFIKDYCPVIEFGLVGQTMH 384 Query: 362 QVDERTPVADLEKLTKIYRGVLERYF 387 Q+DER PVADLEKLT+IY GVL+RYF Sbjct: 385 QIDERAPVADLEKLTRIYHGVLDRYF 410 >sp|Q1QH74.2|DAPE_NITHX RecName: Full=Succinyl-diaminopimelate desuccinylase; Short=SDAP desuccinylase; AltName: Full=N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase Length = 389 Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/386 (80%), Positives = 346/386 (89%) Query: 2 SDAVSIARDLVRCPSVTPADAGALGVLENLLKTAGFEVHRVTFSEPGTADIDNLYARIGS 61 +DA+SIARDLVRCPSVTPADAGALGVLE LL AGFEVHRVTFSEPG ADIDNLYARIG+ Sbjct: 3 TDALSIARDLVRCPSVTPADAGALGVLEKLLGDAGFEVHRVTFSEPGAADIDNLYARIGA 62 Query: 62 SAPHITFAGHTDVVPPGDEAAWTLGAFSGEVKDGYLYGRGAVDMKGGIACSVAAVLQYLQ 121 + PHI FAGHTDVVPPGDE+AWT GAFSGEVKDG+LYGRG VDMKGGIACS AA L+YL+ Sbjct: 63 TGPHIAFAGHTDVVPPGDESAWTHGAFSGEVKDGFLYGRGTVDMKGGIACSAAATLEYLE 122 Query: 122 DHGGKPQENGNGSISFLITGDEEDVSINGTVKLLKWCAERGEKFDHCVLGEPSNVEVLGD 181 HGG+P ++GNGSISFLITGDEED+++NGTVKL++W A RGEKFDHCVLGEPSNV LGD Sbjct: 123 AHGGRPGKDGNGSISFLITGDEEDIAVNGTVKLMQWAAARGEKFDHCVLGEPSNVAELGD 182 Query: 182 MIKIGRRGSQSGTLVVDGVQGHVAYPHRASNPVPDISRLIVALSDEPLDRGSAQFQASNL 241 IKIGRRGSQSGTL V+GVQGHVAYPHRASNP+PDI+ LI AL EPLD+GSAQFQ SNL Sbjct: 183 CIKIGRRGSQSGTLYVEGVQGHVAYPHRASNPIPDIAALITALVSEPLDQGSAQFQPSNL 242 Query: 242 EFTTVDVGNTASNVIPGQARAKFNIRYNDNHTQESLRQLVDERLAKACGNRIRAHIDWMP 301 FT+VDVGN A+NVIPGQARAKFN+R+ND+H QESLR L++ R+AK GNRIR I W P Sbjct: 243 AFTSVDVGNPANNVIPGQARAKFNVRFNDHHNQESLRALIEARVAKVSGNRIRTRIVWEP 302 Query: 302 SNSNVFVTQPGPFTDLAVAAIEEITGRRPELSTSGGTSDARFISSYCPVIEFGLVGQTMH 361 SN++VFVT+PGPFTDL VAAIEE+TGRRPEL+T GGTSDARFI YCPVIEFGLVGQTMH Sbjct: 303 SNADVFVTRPGPFTDLVVAAIEEVTGRRPELNTGGGTSDARFIKDYCPVIEFGLVGQTMH 362 Query: 362 QVDERTPVADLEKLTKIYRGVLERYF 387 Q+DER PVADLEKLT+IY GVL+RYF Sbjct: 363 QIDERAPVADLEKLTRIYHGVLDRYF 388