BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0094.0083.p         (147 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774753.1| hypothetical protein bll8113 [Bradyrhizobium ja...   187   4e-46
ref|YP_001243113.1| hypothetical protein BBta_7343 [Bradyrhizobi...   183   9e-45
ref|YP_001202929.1| hypothetical protein BRADO0766 [Bradyrhizobi...   170   6e-41
ref|YP_484287.1| hypothetical protein RPB_0665 [Rhodopseudomonas...   149   2e-34
ref|YP_567225.1| hypothetical protein RPD_0084 [Rhodopseudomonas...   147   6e-34

>ref|NP_774753.1| hypothetical protein bll8113 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53378.1| bll8113 [Bradyrhizobium japonicum USDA 110]
          Length = 145

 Score =  187 bits (476), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 94/142 (66%), Positives = 104/142 (73%), Gaps = 3/142 (2%)

Query: 9   RLFGVRLGFALLAATFAAPCAIAQQADAPQKPGKM---IHAGDVLSGELGVMKVRDAKNR 65
           +LF  RL  A        P   AQQ DA   P K    I+ GDVLSGEL  MKVRD KN 
Sbjct: 3   KLFATRLALAATMMLLVTPAISAQQDDAAPPPPKPGKPINTGDVLSGELNAMKVRDVKNA 62

Query: 66  GKRVATYQITSEPRRLPPPNGLCNLETGPETFQLVPTNDAQAAQLKSLSGKAISVKVDEV 125
           GKR+A YQITSEPRRLP PNGLCNLETGPETFQLVP+ DAQAAQLK+  GK IS+KVDEV
Sbjct: 63  GKRIAMYQITSEPRRLPAPNGLCNLETGPETFQLVPSGDAQAAQLKTFVGKEISIKVDEV 122

Query: 126 ACAKDAGEMSEAIVTKWSVVAK 147
           ACA D G+MSEA+VTKWS++ K
Sbjct: 123 ACASDPGQMSEAVVTKWSIIKK 144


>ref|YP_001243113.1| hypothetical protein BBta_7343 [Bradyrhizobium sp. BTAi1]
 gb|ABQ39207.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 141

 Score =  183 bits (464), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 88/139 (63%), Positives = 109/139 (78%), Gaps = 1/139 (0%)

Query: 9   RLFGVRLGFALLAATFAAPCAIAQQADAPQKPGKMIHAGDVLSGELGVMKVRDAKNRGKR 68
           R FG RL    +    +AP  +AQQ + PQK G+ ++AGDVLSGEL  +K++ AK  G+ 
Sbjct: 4   RGFGKRLALGAILVALSAPSVLAQQGEVPQKAGRPLNAGDVLSGELNALKIKSAKP-GQP 62

Query: 69  VATYQITSEPRRLPPPNGLCNLETGPETFQLVPTNDAQAAQLKSLSGKAISVKVDEVACA 128
            A YQITSEPRRLPPP+GLCNLETGPETFQLV  N+AQA+QLK L GK I+VKVDE+ACA
Sbjct: 63  SAAYQITSEPRRLPPPSGLCNLETGPETFQLVTANNAQASQLKGLLGKQIAVKVDEIACA 122

Query: 129 KDAGEMSEAIVTKWSVVAK 147
           +DAG+MSEA+VTKWS+V +
Sbjct: 123 QDAGQMSEAVVTKWSLVKR 141


>ref|YP_001202929.1| hypothetical protein BRADO0766 [Bradyrhizobium sp. ORS 278]
 emb|CAL74691.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 142

 Score =  170 bits (431), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 85/139 (61%), Positives = 105/139 (75%), Gaps = 1/139 (0%)

Query: 9   RLFGVRLGFALLAATFAAPCAIAQQADAPQKPGKMIHAGDVLSGELGVMKVRDAKNRGKR 68
           R FG RL    +    +A   +AQQ +APQK GK ++ GDVLSGEL  +KV+ AK  G+ 
Sbjct: 5   RGFGKRLALGAIWMVLSAASVLAQQGEAPQKAGKPLNTGDVLSGELTALKVKGAKP-GQP 63

Query: 69  VATYQITSEPRRLPPPNGLCNLETGPETFQLVPTNDAQAAQLKSLSGKAISVKVDEVACA 128
            + YQITSEPRRLPPP+GLCNLETGPETFQLV    AQA+QLK L GK I+VKVDE+ACA
Sbjct: 64  SSAYQITSEPRRLPPPSGLCNLETGPETFQLVTATPAQASQLKGLLGKQIAVKVDEIACA 123

Query: 129 KDAGEMSEAIVTKWSVVAK 147
           + AG++SEA+VTKWS+V +
Sbjct: 124 QHAGQISEAVVTKWSLVKR 142


>ref|YP_484287.1| hypothetical protein RPB_0665 [Rhodopseudomonas palustris HaA2]
 gb|ABD05376.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 144

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/140 (57%), Positives = 101/140 (72%), Gaps = 6/140 (4%)

Query: 9   RLFGVRLGFALLAATFAAPCAIAQQAD---APQKPGKMIHAGDVLSGELGVMKVRDAKNR 65
           RL    L  A L      P A+AQ A+   A  KP K +  GDVLSGEL  M+ R A+ +
Sbjct: 7   RLLKSSLIVAALM-VLPVPPALAQAAESQAALPKP-KAMKVGDVLSGELTAMRSR-ARAK 63

Query: 66  GKRVATYQITSEPRRLPPPNGLCNLETGPETFQLVPTNDAQAAQLKSLSGKAISVKVDEV 125
           GK+V  YQ+ SEPRRLPPP+GLCNLE GPETFQ+VP +DAQAAQLKS  GK +++KV+ V
Sbjct: 64  GKKVPVYQLVSEPRRLPPPSGLCNLENGPETFQIVPASDAQAAQLKSHLGKNVALKVESV 123

Query: 126 ACAKDAGEMSEAIVTKWSVV 145
           ACA++AG+ SEA+VTKWS+V
Sbjct: 124 ACAEEAGQYSEAVVTKWSLV 143


>ref|YP_567225.1| hypothetical protein RPD_0084 [Rhodopseudomonas palustris BisB5]
 gb|ABE37324.1| hypothetical protein RPD_0084 [Rhodopseudomonas palustris BisB5]
          Length = 142

 Score =  147 bits (370), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 81/134 (60%), Positives = 99/134 (73%), Gaps = 6/134 (4%)

Query: 17  FALLAATFAAPCAIAQQAD---APQKPGKMIHAGDVLSGELGVMKVRDAKNRGKRVATYQ 73
           FA + +  AAP A AQ  +   A  KP  M   GDVL+GEL  M+ R A  +GK++  YQ
Sbjct: 12  FAAVLSLSAAP-AYAQGTESRAALPKPMAM-QVGDVLNGELTAMRSR-ANGKGKKIPVYQ 68

Query: 74  ITSEPRRLPPPNGLCNLETGPETFQLVPTNDAQAAQLKSLSGKAISVKVDEVACAKDAGE 133
           +TSEPRRLPPP GLCNLE GPETFQ+VP  DAQAAQLKS  GK I++KV+ VACA++AG+
Sbjct: 69  LTSEPRRLPPPAGLCNLENGPETFQIVPAGDAQAAQLKSHLGKQIALKVEAVACAEEAGQ 128

Query: 134 MSEAIVTKWSVVAK 147
            SEA+VTKWS+VAK
Sbjct: 129 YSEAVVTKWSMVAK 142