BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0094.0081.p         (106 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001202927.1| hypothetical protein BRADO0764 [Bradyrhizobi...   184   3e-45
ref|YP_001243115.1| hypothetical protein BBta_7345 [Bradyrhizobi...   183   9e-45
ref|NP_774755.1| hypothetical protein bll8115 [Bradyrhizobium ja...   178   3e-43
ref|YP_534688.1| hypothetical protein RPC_4847 [Rhodopseudomonas...   160   5e-38
ref|YP_002290511.1| hypothetical protein OCAR_7544 [Oligotropha ...   158   2e-37

>ref|YP_001202927.1| hypothetical protein BRADO0764 [Bradyrhizobium sp. ORS 278]
 sp|A4YLB3.1|Y764_BRASO RecName: Full=UPF0133 protein BRADO0764
 emb|CAL74689.1| conserved hypothetical protein; putative YbaB family protein
           [Bradyrhizobium sp. ORS 278]
          Length = 106

 Score =  184 bits (468), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 92/104 (88%), Positives = 98/104 (94%)

Query: 1   MADFLGMMKQAAQLQSKMQEMQEQLGNVEVEGISGGGLVAVRMTAKMEVKGIKIDPSLMK 60
           MADFLGMMKQAAQLQSKMQEMQ +LGNVEVEGISGGGLVAVRMTAKM+VK IKIDPSL+K
Sbjct: 1   MADFLGMMKQAAQLQSKMQEMQAELGNVEVEGISGGGLVAVRMTAKMDVKSIKIDPSLLK 60

Query: 61  PEEREVLEDLLVTAHGDARRKAETAMQEKMMALTGGLGMPPGFG 104
           PEE E+LEDLLVTAHGDARRKAE AMQEKM A+TG LG+PPGFG
Sbjct: 61  PEEAEILEDLLVTAHGDARRKAEAAMQEKMQAITGKLGLPPGFG 104


>ref|YP_001243115.1| hypothetical protein BBta_7345 [Bradyrhizobium sp. BTAi1]
 sp|A5ESR5.1|Y7345_BRASB RecName: Full=UPF0133 protein BBta_7345
 gb|ABQ39209.1| hypothetical protein BBta_7345 [Bradyrhizobium sp. BTAi1]
          Length = 106

 Score =  183 bits (464), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 91/104 (87%), Positives = 99/104 (95%)

Query: 1   MADFLGMMKQAAQLQSKMQEMQEQLGNVEVEGISGGGLVAVRMTAKMEVKGIKIDPSLMK 60
           MADFLGMMKQAAQLQSKMQ MQE+LG++EVEGISGGGLVAVRMTAKMEVKGIKIDPSL+K
Sbjct: 1   MADFLGMMKQAAQLQSKMQAMQEELGSLEVEGISGGGLVAVRMTAKMEVKGIKIDPSLLK 60

Query: 61  PEEREVLEDLLVTAHGDARRKAETAMQEKMMALTGGLGMPPGFG 104
           P+E E+LEDLLVTAHGDARRKAE AMQEKM A+TG LG+PPGFG
Sbjct: 61  PDEAEILEDLLVTAHGDARRKAEAAMQEKMQAITGKLGLPPGFG 104


>ref|NP_774755.1| hypothetical protein bll8115 [Bradyrhizobium japonicum USDA 110]
 sp|Q89BN3.1|YUD3_BRAJA RecName: Full=UPF0133 protein bll8115
 dbj|BAC53380.1| bll8115 [Bradyrhizobium japonicum USDA 110]
          Length = 106

 Score =  178 bits (451), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 92/105 (87%), Positives = 98/105 (93%), Gaps = 1/105 (0%)

Query: 1   MADFLGMMKQAAQLQSKMQEMQEQLGNVEVEGISGGGLVAVRMTAKMEVKGIKIDPSLMK 60
           MADFLGMMKQAAQLQSKMQEMQ+ LGNVEVEGISGGGLV VRMTAKM+VKG+KIDPSLMK
Sbjct: 1   MADFLGMMKQAAQLQSKMQEMQDALGNVEVEGISGGGLVVVRMTAKMDVKGVKIDPSLMK 60

Query: 61  PEEREVLEDLLVTAHGDARRKAETAMQEKMMALTGGLGMPPG-FG 104
            EEREVLEDLLVTA GDARRKAE A+QEKM +LTGGLG+PPG FG
Sbjct: 61  AEEREVLEDLLVTALGDARRKAEAAVQEKMQSLTGGLGLPPGLFG 105


>ref|YP_534688.1| hypothetical protein RPC_4847 [Rhodopseudomonas palustris BisB18]
 sp|Q20WW7.1|Y4847_RHOPB RecName: Full=UPF0133 protein RPC_4847
 gb|ABD90369.1| conserved hypothetical protein 103 [Rhodopseudomonas palustris
           BisB18]
          Length = 105

 Score =  160 bits (405), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/104 (78%), Positives = 91/104 (87%)

Query: 1   MADFLGMMKQAAQLQSKMQEMQEQLGNVEVEGISGGGLVAVRMTAKMEVKGIKIDPSLMK 60
           MADFLGMMKQAAQLQSKM+ MQE+L ++EVEGISGGGLV+VRMTAKMEVK IKIDPSL+ 
Sbjct: 1   MADFLGMMKQAAQLQSKMKAMQEELEHIEVEGISGGGLVSVRMTAKMEVKTIKIDPSLIN 60

Query: 61  PEEREVLEDLLVTAHGDARRKAETAMQEKMMALTGGLGMPPGFG 104
            +E  VLEDLLVTA  DA RKAE+AMQEKM ALTGGL +PPG G
Sbjct: 61  ADEAGVLEDLLVTALADAHRKAESAMQEKMQALTGGLSLPPGLG 104


>ref|YP_002290511.1| hypothetical protein OCAR_7544 [Oligotropha carboxidovorans OM5]
 ref|YP_004631561.1| cytoplasmic protein [Oligotropha carboxidovorans OM5]
 sp|B6JJQ2.1|Y7544_OLICO RecName: Full=UPF0133 protein OCAR_7544
 gb|ACI94646.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
 gb|AEI01745.1| putative cytoplasmic protein [Oligotropha carboxidovorans OM4]
 gb|AEI05320.1| putative cytoplasmic protein [Oligotropha carboxidovorans OM5]
          Length = 105

 Score =  158 bits (400), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/104 (78%), Positives = 89/104 (85%), Gaps = 1/104 (0%)

Query: 1   MADFLGMMKQAAQLQSKMQEMQEQLGNVEVEGISGGGLVAVRMTAKMEVKGIKIDPSLMK 60
           MADFLGMMKQAAQLQSKM+EMQEQL  VEVEG +GG +V VRMTAKME+K + IDPSLMK
Sbjct: 1   MADFLGMMKQAAQLQSKMKEMQEQLDQVEVEGSAGGSMVTVRMTAKMELKAVSIDPSLMK 60

Query: 61  PEEREVLEDLLVTAHGDARRKAETAMQEKMMALTGGLGMPPGFG 104
           PEEREVLEDLLV A  DARRKAE AMQE+M ALTGGL + PG G
Sbjct: 61  PEEREVLEDLLVAAQNDARRKAEEAMQERMKALTGGLSI-PGLG 103