BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0094.0079.p         (139 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774762.1| hypothetical protein blr8122 [Bradyrhizobium ja...   248   2e-64
pdb|3I4S|A Chain A, Crystal Structure Of Histidine Triad Protein...   247   5e-64
ref|YP_001243117.1| hypothetical protein BBta_7347 [Bradyrhizobi...   246   7e-64
ref|YP_567229.1| histidine triad (HIT) protein [Rhodopseudomonas...   244   3e-63
ref|YP_534690.1| histidine triad (HIT) protein [Rhodopseudomonas...   241   2e-62

>ref|NP_774762.1| hypothetical protein blr8122 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53387.1| blr8122 [Bradyrhizobium japonicum USDA 110]
          Length = 172

 Score =  248 bits (634), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 122/139 (87%), Positives = 129/139 (92%)

Query: 1   MSASNWSLHSQLKKDTIDIGDLPLCKVLVIKDAHYPWLLLVPRRDGAVEIIDLDEVAQAQ 60
           MS   WSLHS+LK+DTIDIGDLPL KVLVIKDA+YPWLLLVPRR  AVEIIDLDEV QAQ
Sbjct: 34  MSEPAWSLHSRLKEDTIDIGDLPLSKVLVIKDANYPWLLLVPRRPDAVEIIDLDEVQQAQ 93

Query: 61  LMTEITRVSRALKEVTKCDKLNVAALGNLVPQLHVHVIARRTSDAAWPRPVWGVMPPLAH 120
           LMTEI+RVSRALKE+TKCDKLN+AALGNLVPQLHVH+IARRT DAAWPRPVWGVM PLAH
Sbjct: 94  LMTEISRVSRALKEITKCDKLNIAALGNLVPQLHVHIIARRTGDAAWPRPVWGVMQPLAH 153

Query: 121 DAEEVQNFISALRRKIWLG 139
           DA EVQNFISALRRKIWLG
Sbjct: 154 DATEVQNFISALRRKIWLG 172


>pdb|3I4S|A Chain A, Crystal Structure Of Histidine Triad Protein Blr8122 From
           Bradyrhizobium Japonicum
 pdb|3I4S|B Chain B, Crystal Structure Of Histidine Triad Protein Blr8122 From
           Bradyrhizobium Japonicum
          Length = 149

 Score =  247 bits (630), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 121/139 (87%), Positives = 129/139 (92%)

Query: 1   MSASNWSLHSQLKKDTIDIGDLPLCKVLVIKDAHYPWLLLVPRRDGAVEIIDLDEVAQAQ 60
           +S   WSLHS+LK+DTIDIGDLPL KVLVIKDA+YPWLLLVPRR  AVEIIDLDEV QAQ
Sbjct: 3   LSEPAWSLHSRLKEDTIDIGDLPLSKVLVIKDANYPWLLLVPRRPDAVEIIDLDEVQQAQ 62

Query: 61  LMTEITRVSRALKEVTKCDKLNVAALGNLVPQLHVHVIARRTSDAAWPRPVWGVMPPLAH 120
           LMTEI+RVSRALKE+TKCDKLN+AALGNLVPQLHVH+IARRT DAAWPRPVWGVM PLAH
Sbjct: 63  LMTEISRVSRALKEITKCDKLNIAALGNLVPQLHVHIIARRTGDAAWPRPVWGVMQPLAH 122

Query: 121 DAEEVQNFISALRRKIWLG 139
           DA EVQNFISALRRKIWLG
Sbjct: 123 DATEVQNFISALRRKIWLG 141


>ref|YP_001243117.1| hypothetical protein BBta_7347 [Bradyrhizobium sp. BTAi1]
 gb|ABQ39211.1| hypothetical protein BBta_7347 [Bradyrhizobium sp. BTAi1]
          Length = 139

 Score =  246 bits (629), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 118/139 (84%), Positives = 128/139 (92%)

Query: 1   MSASNWSLHSQLKKDTIDIGDLPLCKVLVIKDAHYPWLLLVPRRDGAVEIIDLDEVAQAQ 60
           M  S WSLH QL KDTIDIGDLPL +VLVIKDA+YPWLLLVPRR+GAVEIIDLDEVAQAQ
Sbjct: 1   MPESAWSLHPQLAKDTIDIGDLPLSRVLVIKDANYPWLLLVPRREGAVEIIDLDEVAQAQ 60

Query: 61  LMTEITRVSRALKEVTKCDKLNVAALGNLVPQLHVHVIARRTSDAAWPRPVWGVMPPLAH 120
           LMTEITRVSRA+KE+TKCDKLNVAALGN+VPQLH+H+IARRT D AWPRPVWGV PPL H
Sbjct: 61  LMTEITRVSRAVKEITKCDKLNVAALGNMVPQLHIHIIARRTGDVAWPRPVWGVAPPLPH 120

Query: 121 DAEEVQNFISALRRKIWLG 139
           DA+EVQ FISA+RRKIWLG
Sbjct: 121 DAQEVQQFISAVRRKIWLG 139


>ref|YP_567229.1| histidine triad (HIT) protein [Rhodopseudomonas palustris BisB5]
 gb|ABE37328.1| histidine triad (HIT) protein [Rhodopseudomonas palustris BisB5]
          Length = 161

 Score =  244 bits (623), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 117/136 (86%), Positives = 127/136 (93%)

Query: 4   SNWSLHSQLKKDTIDIGDLPLCKVLVIKDAHYPWLLLVPRRDGAVEIIDLDEVAQAQLMT 63
           S+WSL SQL+KDTI+IGDLPL +VLVIKDAHYPWLLLVPRR  AVEIIDLDEV QAQLMT
Sbjct: 26  SDWSLSSQLEKDTINIGDLPLSRVLVIKDAHYPWLLLVPRRADAVEIIDLDEVEQAQLMT 85

Query: 64  EITRVSRALKEVTKCDKLNVAALGNLVPQLHVHVIARRTSDAAWPRPVWGVMPPLAHDAE 123
           EI+RV RALKE+TKCDKLN+AALGN+VPQLHVH+IARR+SDAAWPRPVWGVMPPL HD E
Sbjct: 86  EISRVGRALKEITKCDKLNIAALGNMVPQLHVHIIARRSSDAAWPRPVWGVMPPLPHDPE 145

Query: 124 EVQNFISALRRKIWLG 139
           EVQ FISALRRKIWLG
Sbjct: 146 EVQQFISALRRKIWLG 161


>ref|YP_534690.1| histidine triad (HIT) protein [Rhodopseudomonas palustris BisB18]
 gb|ABD90371.1| histidine triad (HIT) protein [Rhodopseudomonas palustris BisB18]
          Length = 139

 Score =  241 bits (616), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 115/139 (82%), Positives = 128/139 (92%)

Query: 1   MSASNWSLHSQLKKDTIDIGDLPLCKVLVIKDAHYPWLLLVPRRDGAVEIIDLDEVAQAQ 60
           M AS+W+LH+QL+KDTIDIGDLPLC+VLVIKDAHYPWLLLVPRR G  EIIDL EV QAQ
Sbjct: 1   MPASDWTLHAQLQKDTIDIGDLPLCRVLVIKDAHYPWLLLVPRRAGVGEIIDLGEVEQAQ 60

Query: 61  LMTEITRVSRALKEVTKCDKLNVAALGNLVPQLHVHVIARRTSDAAWPRPVWGVMPPLAH 120
           LMTEI+RV RALK+VTKCDKLN+AALGNLVPQLHVHVIARR+ D AWPRPVWGV+PPLAH
Sbjct: 61  LMTEISRVGRALKDVTKCDKLNIAALGNLVPQLHVHVIARRSGDVAWPRPVWGVVPPLAH 120

Query: 121 DAEEVQNFISALRRKIWLG 139
           D EEVQ+FI+ LRR+IWLG
Sbjct: 121 DPEEVQSFIAELRRRIWLG 139