BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0094.0074.p         (74 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774918.1| hypothetical protein bsl8278 [Bradyrhizobium ja...   149   1e-34
ref|YP_002290564.1| hypothetical protein OCAR_7598 [Oligotropha ...   108   2e-22
ref|YP_001415648.1| hypothetical protein Xaut_0739 [Xanthobacter...   107   8e-22
ref|YP_915270.1| hypothetical protein Pden_1474 [Paracoccus deni...   106   1e-21
ref|ZP_08074347.1| Protein of unknown function DUF2274 [Methyloc...   106   1e-21

>ref|NP_774918.1| hypothetical protein bsl8278 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53543.1| bsl8278 [Bradyrhizobium japonicum USDA 110]
          Length = 74

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/74 (100%), Positives = 74/74 (100%)

Query: 1  MSKLKLGTILDDKPVKIAVELPAAVHRNLLAYAEAIARESGQPAPDPAKLIAPMIQRFMA 60
          MSKLKLGTILDDKPVKIAVELPAAVHRNLLAYAEAIARESGQPAPDPAKLIAPMIQRFMA
Sbjct: 1  MSKLKLGTILDDKPVKIAVELPAAVHRNLLAYAEAIARESGQPAPDPAKLIAPMIQRFMA 60

Query: 61 TDKGFSKVKRAATN 74
          TDKGFSKVKRAATN
Sbjct: 61 TDKGFSKVKRAATN 74


>ref|YP_002290564.1| hypothetical protein OCAR_7598 [Oligotropha carboxidovorans OM5]
 ref|YP_004631510.1| hypothetical protein OCA5_c05450 [Oligotropha carboxidovorans
          OM5]
 gb|ACI94699.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
 gb|AEI01694.1| hypothetical protein OCA4_c05440 [Oligotropha carboxidovorans
          OM4]
 gb|AEI05269.1| hypothetical protein OCA5_c05450 [Oligotropha carboxidovorans
          OM5]
          Length = 77

 Score =  108 bits (271), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/73 (67%), Positives = 64/73 (87%)

Query: 1  MSKLKLGTILDDKPVKIAVELPAAVHRNLLAYAEAIARESGQPAPDPAKLIAPMIQRFMA 60
          M+KLKLG I DDKPVKIA+ELPA++HR+L+AYAE +ARE+GQPA DP KLI PM++RF+A
Sbjct: 1  MAKLKLGPIADDKPVKIAMELPASLHRDLVAYAEVLARETGQPATDPVKLIVPMLERFIA 60

Query: 61 TDKGFSKVKRAAT 73
          TD+ F+K +R+ T
Sbjct: 61 TDREFAKARRSGT 73


>ref|YP_001415648.1| hypothetical protein Xaut_0739 [Xanthobacter autotrophicus Py2]
 gb|ABS65991.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2]
          Length = 76

 Score =  107 bits (266), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 52/74 (70%), Positives = 63/74 (85%), Gaps = 1/74 (1%)

Query: 1  MSKLKLGTILDDKPVKIAVELPAAVHRNLLAYAEAIARESGQPAPDPAKLIAPMIQRFMA 60
          M+KLKLG I DDKPVKI+VELPAA+HR+LLAYAE + RESGQ A +PAKL+APM+ RFMA
Sbjct: 1  MAKLKLGAIEDDKPVKISVELPAALHRDLLAYAEILGRESGQ-AIEPAKLVAPMVARFMA 59

Query: 61 TDKGFSKVKRAATN 74
          TD+GF K KR  ++
Sbjct: 60 TDRGFLKAKRTVSS 73


>ref|YP_915270.1| hypothetical protein Pden_1474 [Paracoccus denitrificans PD1222]
 gb|ABL69574.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
          Length = 77

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/74 (64%), Positives = 61/74 (82%)

Query: 1  MSKLKLGTILDDKPVKIAVELPAAVHRNLLAYAEAIARESGQPAPDPAKLIAPMIQRFMA 60
          MSKLKLG + DD PVK+ VELPA VHR+L+AYAE +AR+SGQ A DP +LI PM++RFMA
Sbjct: 1  MSKLKLGPLPDDTPVKVTVELPATVHRDLVAYAEILARDSGQAAADPVRLIVPMLERFMA 60

Query: 61 TDKGFSKVKRAATN 74
          TD+GF+K +R +T 
Sbjct: 61 TDRGFAKARRVSTK 74


>ref|ZP_08074347.1| Protein of unknown function DUF2274 [Methylocystis sp. ATCC
          49242]
 gb|EFX97990.1| Protein of unknown function DUF2274 [Methylocystis sp. ATCC
          49242]
          Length = 73

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/72 (65%), Positives = 62/72 (86%)

Query: 1  MSKLKLGTILDDKPVKIAVELPAAVHRNLLAYAEAIARESGQPAPDPAKLIAPMIQRFMA 60
          M+KLKLG + DDKPVK+ VELPA +HR+L+ YAE +ARE+GQPA DP KLI PM++RF+A
Sbjct: 1  MTKLKLGPLPDDKPVKVTVELPAPLHRDLVTYAEVLARETGQPAADPVKLIVPMLERFIA 60

Query: 61 TDKGFSKVKRAA 72
          TD+GF+K +R+A
Sbjct: 61 TDRGFAKARRSA 72