BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0094.0064.p         (191 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774767.1| hypothetical protein bll8127 [Bradyrhizobium ja...   155   2e-36
ref|YP_001243121.1| putative protease [Bradyrhizobium sp. BTAi1]...   152   2e-35
ref|YP_001202919.1| putative protease [Bradyrhizobium sp. ORS 27...   147   9e-34
ref|YP_567442.1| hypothetical protein RPD_0303 [Rhodopseudomonas...   145   3e-33
ref|YP_575807.1| hypothetical protein Nham_0457 [Nitrobacter ham...   142   3e-32

>ref|NP_774767.1| hypothetical protein bll8127 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53392.1| bll8127 [Bradyrhizobium japonicum USDA 110]
          Length = 171

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 78/115 (67%), Positives = 91/115 (79%)

Query: 1   MRNLMIFAAILIGLGTFMAQMASKMSPAAATTTRQTVAPAVTAAQAGARAFSIAPDPRGH 60
           MRN+MI AAI+IGLGTFMAQMA +MS A+AT+  +T     T A AG R+ +I  D RGH
Sbjct: 2   MRNIMILAAIMIGLGTFMAQMADRMSSASATSAPRTTVAVATTAPAGGRSLAIGRDGRGH 61

Query: 61  FATDGRIDGQRINFMVDTGASVVALNEASAARFGLRPVPGDYTSRVTTANGTIKA 115
           F T+GRI+GQRI FMVDTGASVVALNE SAARFGLRP  G+Y + V+TANGTIKA
Sbjct: 62  FQTEGRIEGQRIGFMVDTGASVVALNETSAARFGLRPSRGEYNATVSTANGTIKA 116


>ref|YP_001243121.1| putative protease [Bradyrhizobium sp. BTAi1]
 gb|ABQ39215.1| putative exported protein of unknown function with protease domajn
           [Bradyrhizobium sp. BTAi1]
          Length = 166

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/111 (67%), Positives = 91/111 (81%)

Query: 5   MIFAAILIGLGTFMAQMASKMSPAAATTTRQTVAPAVTAAQAGARAFSIAPDPRGHFATD 64
           MIFAA+L+GLGTFMAQ+A +++PA A+ T    A ++ +A AG R+ SI  D RGHF  D
Sbjct: 1   MIFAAVLVGLGTFMAQLADRLTPAPASATPAVRAASLESAAAGQRSLSIPTDRRGHFRAD 60

Query: 65  GRIDGQRINFMVDTGASVVALNEASAARFGLRPVPGDYTSRVTTANGTIKA 115
           GRIDGQRI+FMVDTGAS+VALNE+SAARFGLRP  GDYT+ VTTANGT+KA
Sbjct: 61  GRIDGQRISFMVDTGASMVALNESSAARFGLRPARGDYTANVTTANGTVKA 111


>ref|YP_001202919.1| putative protease [Bradyrhizobium sp. ORS 278]
 emb|CAL74681.1| conserved hypothetical protein; putative signal peptide; putative
           protease [Bradyrhizobium sp. ORS 278]
          Length = 166

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 72/111 (64%), Positives = 88/111 (79%)

Query: 5   MIFAAILIGLGTFMAQMASKMSPAAATTTRQTVAPAVTAAQAGARAFSIAPDPRGHFATD 64
           MIFAA+L+GLGTFMAQ+A +++PA A+ T    +  V  A A  R+ SI  D RGHF  D
Sbjct: 1   MIFAAVLVGLGTFMAQLADRLTPAPASATPSVRSATVDTAAASQRSLSIPTDRRGHFRAD 60

Query: 65  GRIDGQRINFMVDTGASVVALNEASAARFGLRPVPGDYTSRVTTANGTIKA 115
           GRIDGQRI+FM+DTGAS+VALNE+SAARFGLRP  G+YT+ VTTANGT+KA
Sbjct: 61  GRIDGQRISFMIDTGASMVALNESSAARFGLRPARGEYTANVTTANGTVKA 111


>ref|YP_567442.1| hypothetical protein RPD_0303 [Rhodopseudomonas palustris BisB5]
 gb|ABE37541.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 170

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 76/118 (64%), Positives = 94/118 (79%), Gaps = 6/118 (5%)

Query: 1   MRNLMIFAAILIGLGTFMAQMASKMSPAAATTTRQTVAPAVT---AAQAGARAFSIAPDP 57
           MRN+MIFAA+++ LG+ MAQ+A +M PA A   + +VA A T   ++ AGAR+ +I  D 
Sbjct: 1   MRNIMIFAALMVVLGSVMAQLADRMMPAPA---QASVAKATTVGMSSNAGARSVAIPRDA 57

Query: 58  RGHFATDGRIDGQRINFMVDTGASVVALNEASAARFGLRPVPGDYTSRVTTANGTIKA 115
           RGHF TDGRIDGQRI FMVDTGASVVALNE SAA+FGLRP P +YT+RV+TANGT+KA
Sbjct: 58  RGHFQTDGRIDGQRIAFMVDTGASVVALNERSAAQFGLRPRPAEYTARVSTANGTVKA 115


>ref|YP_575807.1| hypothetical protein Nham_0457 [Nitrobacter hamburgensis X14]
 gb|ABE61347.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 175

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/120 (63%), Positives = 90/120 (75%), Gaps = 5/120 (4%)

Query: 1   MRNLMIFAAILIGLGTFMAQMASKMSPAAATTT----RQTVAPAVTA-AQAGARAFSIAP 55
           MRNLMIFAA+LIG GT+MAQ+A KM+  AA       +QT   A+    QA +R+ SIA 
Sbjct: 1   MRNLMIFAALLIGAGTYMAQLADKMTATAAARVTTPAQQTAFTAIQDNTQADSRSVSIAR 60

Query: 56  DPRGHFATDGRIDGQRINFMVDTGASVVALNEASAARFGLRPVPGDYTSRVTTANGTIKA 115
           D RGHF T+GRIDGQRI FMVDTGASV+ALNE SAAR G+RP   DYT++VTTANG +KA
Sbjct: 61  DGRGHFQTEGRIDGQRIGFMVDTGASVIALNETSAARIGVRPSQNDYTTQVTTANGKVKA 120