BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0062.p (488 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_102375.1| permease [Mesorhizobium loti MAFF303099] >gi|14... 781 0.0 gb|AEH77718.1| probabable cytosine/uracil/thiamine/allantoin per... 775 0.0 gb|AEG03340.1| permease for cytosine/purines uracil thiamine all... 774 0.0 ref|YP_001326092.1| permease for cytosine/purines uracil thiamin... 774 0.0 ref|YP_004547870.1| permease for cytosine/purines uracil thiamin... 773 0.0 >ref|NP_102375.1| permease [Mesorhizobium loti MAFF303099] dbj|BAB48161.1| probable permease [Mesorhizobium loti MAFF303099] Length = 485 Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/483 (80%), Positives = 435/483 (90%) Query: 6 LEIKNASPSLYNDDLAPARERNWGAFSIFNVWTSDVHSLWGYYLAASLFLLCGSFVNFIL 65 + I+ ASP LYN+DLAPA+ RNWGAFSIFNVWTSDVHSLWGYYLAASLFL CG FVNFI+ Sbjct: 1 MTIQGASPDLYNEDLAPAKVRNWGAFSIFNVWTSDVHSLWGYYLAASLFLFCGGFVNFII 60 Query: 66 AIGVGSLVIFVLMSLIGNAGVKTGVPYPVLARASFGVWGANIPALVRAVVACFWYGAQTA 125 AIG+GSL+I+ LM+++GNAGVKTGVPYPVLARASFG+WGANIPALVRA+VACFWYGAQTA Sbjct: 61 AIGIGSLIIYALMNMVGNAGVKTGVPYPVLARASFGIWGANIPALVRAIVACFWYGAQTA 120 Query: 126 AASGAIVALLTRIDSFKAFHQSSHMLGHSTLEVICFVVIWALQLLIIQRGMETVRRFQDW 185 AASGAIVALLTR+ F F+++SH+LGHSTLEVICFVVIWALQLLIIQ+GMETVRRFQDW Sbjct: 121 AASGAIVALLTRLQWFDEFNKTSHLLGHSTLEVICFVVIWALQLLIIQKGMETVRRFQDW 180 Query: 186 AGPAVWLMMLILAIYLCIAAGGISLTAPIPQDVLLEKTKEAGVPGVPGSFPALCAVAATW 245 AGPAVW+MML+LAIYLC+ +G + T+ IP DVL EKT +AG+PG PGS+ AL VAA W Sbjct: 181 AGPAVWVMMLLLAIYLCVKSGTFAFTSDIPMDVLREKTADAGIPGDPGSWTALFGVAAIW 240 Query: 246 ITYFAALYLNFCDFSRYAPDVRALRKGNIWGLPVNLILFSLVAGVTTIAAFNVYHEVLLH 305 +TYF+ALYLNFCDF+RYAPD ALRKGNIWGLPVNLILFSLVAGVTTIAA++VYHEVLLH Sbjct: 241 VTYFSALYLNFCDFARYAPDKAALRKGNIWGLPVNLILFSLVAGVTTIAAYDVYHEVLLH 300 Query: 306 PDQISAKFDSWFLALLAAVTFAVATLGINVVANFVSPAFDFSNVFPRHIDFKKGGYIAAL 365 PDQISAKFDSWFLA LAA+TFAVATLGINVVANFVSPAFDFSNVFPR IDFKKGGYIAAL Sbjct: 301 PDQISAKFDSWFLAALAALTFAVATLGINVVANFVSPAFDFSNVFPRQIDFKKGGYIAAL 360 Query: 366 IALALYPFAPWEGSAASFVGLIGATMGPIFGIMMVDYYLIAKGRVNVPALYQEDGEYRFQ 425 IAL LYPFAPWEGSAA FVG+IGATMGPIFG+MMVDYYLI KG V+V ALY+EDGE+RFQ Sbjct: 361 IALVLYPFAPWEGSAAHFVGIIGATMGPIFGVMMVDYYLIRKGEVDVEALYREDGEFRFQ 420 Query: 426 NGWNVSALIAAAIGALFSSVLPNFTSILPAWWAVYGWFFGVGIAGAVYYALRVAMPSPVA 485 GW+V+A IAA IGA+FSS+LPNFT+ LP+WW VYGWFFGV IAG +YY LR A Sbjct: 421 GGWHVNAFIAAGIGAVFSSILPNFTNWLPSWWGVYGWFFGVAIAGTIYYVLRTVAVGAGA 480 Query: 486 RTA 488 +TA Sbjct: 481 KTA 483 >gb|AEH77718.1| probabable cytosine/uracil/thiamine/allantoin permease [Sinorhizobium meliloti SM11] Length = 485 Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/467 (82%), Positives = 426/467 (91%) Query: 11 ASPSLYNDDLAPARERNWGAFSIFNVWTSDVHSLWGYYLAASLFLLCGSFVNFILAIGVG 70 ASP LYN+DLAPA+ERNWGAFSIFNVWTSDVHSLWGYYLAASLFL CGSF+NF+LAIG+G Sbjct: 7 ASPQLYNEDLAPAKERNWGAFSIFNVWTSDVHSLWGYYLAASLFLFCGSFMNFLLAIGIG 66 Query: 71 SLVIFVLMSLIGNAGVKTGVPYPVLARASFGVWGANIPALVRAVVACFWYGAQTAAASGA 130 SL+IF LM L+G AGV+TGVP+PVLARASFG+WGAN PA+VRA+VACFWYGAQTAAASGA Sbjct: 67 SLIIFFLMQLVGVAGVRTGVPFPVLARASFGIWGANFPAIVRAIVACFWYGAQTAAASGA 126 Query: 131 IVALLTRIDSFKAFHQSSHMLGHSTLEVICFVVIWALQLLIIQRGMETVRRFQDWAGPAV 190 IVALL R +S FHQSSHMLGHSTLE++C+VV+W LQLLIIQ GMETVR+FQDWAGPAV Sbjct: 127 IVALLVRNESLLQFHQSSHMLGHSTLELVCYVVVWGLQLLIIQNGMETVRKFQDWAGPAV 186 Query: 191 WLMMLILAIYLCIAAGGISLTAPIPQDVLLEKTKEAGVPGVPGSFPALCAVAATWITYFA 250 W+MML+LAIYL + AGG S + IP DVLLEKTK AGVPGVPGSF AL AVAA W+TYF+ Sbjct: 187 WVMMLLLAIYLVVKAGGFSFSHTIPMDVLLEKTKNAGVPGVPGSFAALGAVAAIWVTYFS 246 Query: 251 ALYLNFCDFSRYAPDVRALRKGNIWGLPVNLILFSLVAGVTTIAAFNVYHEVLLHPDQIS 310 ALYLNFCDFSRY P R+L+ GN+WGLPVNLILFSLVAGVTTIAAFNVY EVLLHPDQIS Sbjct: 247 ALYLNFCDFSRYCPSERSLKVGNLWGLPVNLILFSLVAGVTTIAAFNVYGEVLLHPDQIS 306 Query: 311 AKFDSWFLALLAAVTFAVATLGINVVANFVSPAFDFSNVFPRHIDFKKGGYIAALIALAL 370 AKFDSWFLALLAA+TFAVATLGINVVANFVSPAFDF+NVFP+HIDFKKGGYIAALIALAL Sbjct: 307 AKFDSWFLALLAALTFAVATLGINVVANFVSPAFDFANVFPKHIDFKKGGYIAALIALAL 366 Query: 371 YPFAPWEGSAASFVGLIGATMGPIFGIMMVDYYLIAKGRVNVPALYQEDGEYRFQNGWNV 430 YPFAPWEG AA FV +IG TMGPIFG+MMVDYYLI KGRV+V ALY+EDGE+RF+NGW+V Sbjct: 367 YPFAPWEGGAAHFVNMIGNTMGPIFGVMMVDYYLIRKGRVDVEALYREDGEFRFENGWHV 426 Query: 431 SALIAAAIGALFSSVLPNFTSILPAWWAVYGWFFGVGIAGAVYYALR 477 +ALIAA IG +FSS+LP TS++PAWW VYGWFFGV IAGA+YYALR Sbjct: 427 NALIAAGIGIVFSSILPGLTSVMPAWWGVYGWFFGVAIAGAIYYALR 473 >gb|AEG03340.1| permease for cytosine/purines uracil thiamine allantoin [Sinorhizobium meliloti BL225C] Length = 485 Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/467 (81%), Positives = 426/467 (91%) Query: 11 ASPSLYNDDLAPARERNWGAFSIFNVWTSDVHSLWGYYLAASLFLLCGSFVNFILAIGVG 70 ASP LYN+DLAPA+ERNWGAFSIFNVWTSDVHSLWGYYLAASLFL CGSF+NF+LAIG+G Sbjct: 7 ASPQLYNEDLAPAKERNWGAFSIFNVWTSDVHSLWGYYLAASLFLFCGSFMNFLLAIGIG 66 Query: 71 SLVIFVLMSLIGNAGVKTGVPYPVLARASFGVWGANIPALVRAVVACFWYGAQTAAASGA 130 SL+IF LM L+G AGV+TGVP+PVLARASFG+WGAN PA+VRA+VACFWYGAQTAAASGA Sbjct: 67 SLIIFFLMQLVGVAGVRTGVPFPVLARASFGIWGANFPAIVRAIVACFWYGAQTAAASGA 126 Query: 131 IVALLTRIDSFKAFHQSSHMLGHSTLEVICFVVIWALQLLIIQRGMETVRRFQDWAGPAV 190 IVALL R +S FHQSSHMLGHSTLE++C+VV+W LQLLIIQ GMETVR+FQDWAGPAV Sbjct: 127 IVALLVRNESLLQFHQSSHMLGHSTLELVCYVVVWGLQLLIIQNGMETVRKFQDWAGPAV 186 Query: 191 WLMMLILAIYLCIAAGGISLTAPIPQDVLLEKTKEAGVPGVPGSFPALCAVAATWITYFA 250 W+MML+LAIYL + AGG S + IP DVLLEKTK AGVPGVPGSF AL AVAA W+TYF+ Sbjct: 187 WVMMLLLAIYLVVKAGGFSFSHTIPMDVLLEKTKNAGVPGVPGSFAALGAVAAIWVTYFS 246 Query: 251 ALYLNFCDFSRYAPDVRALRKGNIWGLPVNLILFSLVAGVTTIAAFNVYHEVLLHPDQIS 310 ALYLNFCDFSRY P R+L+ GN+WGLPVNLILFSLVAGVTTIAAFNVY EVLLHPDQIS Sbjct: 247 ALYLNFCDFSRYCPSERSLKVGNLWGLPVNLILFSLVAGVTTIAAFNVYGEVLLHPDQIS 306 Query: 311 AKFDSWFLALLAAVTFAVATLGINVVANFVSPAFDFSNVFPRHIDFKKGGYIAALIALAL 370 AKFDSWFLALLAA+TFAVATLGINVVANFVSPAFDF+NVFP+HIDFKKGGYIAALIALAL Sbjct: 307 AKFDSWFLALLAALTFAVATLGINVVANFVSPAFDFANVFPKHIDFKKGGYIAALIALAL 366 Query: 371 YPFAPWEGSAASFVGLIGATMGPIFGIMMVDYYLIAKGRVNVPALYQEDGEYRFQNGWNV 430 YPFAPWEG AA FV +IG TMGPIFG+MMVDYYLI KGRV+V ALY+EDGE+RF+NGW+V Sbjct: 367 YPFAPWEGGAAHFVNMIGNTMGPIFGVMMVDYYLIRKGRVDVEALYREDGEFRFENGWHV 426 Query: 431 SALIAAAIGALFSSVLPNFTSILPAWWAVYGWFFGVGIAGAVYYALR 477 +AL+AA IG +FSS+LP TS++PAWW VYGWFFGV IAGA+YYALR Sbjct: 427 NALVAAGIGIVFSSILPGLTSVMPAWWGVYGWFFGVAIAGAIYYALR 473 >ref|YP_001326092.1| permease for cytosine/purines uracil thiamine allantoin [Sinorhizobium medicae WSM419] gb|ABR59257.1| permease for cytosine/purines uracil thiamine allantoin [Sinorhizobium medicae WSM419] Length = 483 Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/467 (80%), Positives = 424/467 (90%) Query: 11 ASPSLYNDDLAPARERNWGAFSIFNVWTSDVHSLWGYYLAASLFLLCGSFVNFILAIGVG 70 ASP LYN+DLAPA+ERNWGAFSIFNVWTSDVHSLWGYYLAASLFL CGSF+NF+LAIG+G Sbjct: 7 ASPQLYNEDLAPAKERNWGAFSIFNVWTSDVHSLWGYYLAASLFLFCGSFMNFLLAIGIG 66 Query: 71 SLVIFVLMSLIGNAGVKTGVPYPVLARASFGVWGANIPALVRAVVACFWYGAQTAAASGA 130 SL+IF LM L+G AGV+TGVP+PVLARASFG+WGAN PA+VRA+VACFWYGAQTAAASGA Sbjct: 67 SLIIFFLMQLVGLAGVRTGVPFPVLARASFGIWGANFPAIVRAIVACFWYGAQTAAASGA 126 Query: 131 IVALLTRIDSFKAFHQSSHMLGHSTLEVICFVVIWALQLLIIQRGMETVRRFQDWAGPAV 190 IVALL R +S FHQSSHMLGHSTLE+IC+VV+W LQLLIIQ GMETVR+FQDWAGPAV Sbjct: 127 IVALLIRNESLLQFHQSSHMLGHSTLELICYVVVWGLQLLIIQNGMETVRKFQDWAGPAV 186 Query: 191 WLMMLILAIYLCIAAGGISLTAPIPQDVLLEKTKEAGVPGVPGSFPALCAVAATWITYFA 250 W+MML+LA+YL + +GG S + IP DVLLEKTK AGVPGVPGS AL AVAA W+TYF+ Sbjct: 187 WVMMLLLAVYLVVKSGGFSFSHTIPMDVLLEKTKNAGVPGVPGSLAALAAVAAIWVTYFS 246 Query: 251 ALYLNFCDFSRYAPDVRALRKGNIWGLPVNLILFSLVAGVTTIAAFNVYHEVLLHPDQIS 310 ALYLNFCDFSRY P R+L+ GN+WGLPVNL+LFSLVAG+TTIAA+NVY EVLLHPDQIS Sbjct: 247 ALYLNFCDFSRYCPSERSLKVGNLWGLPVNLVLFSLVAGITTIAAYNVYGEVLLHPDQIS 306 Query: 311 AKFDSWFLALLAAVTFAVATLGINVVANFVSPAFDFSNVFPRHIDFKKGGYIAALIALAL 370 AKFDSWFLAL+AA+TFAVATLGINVVANFVSPAFDF+NVFP+HIDFK+GGYIAALIALAL Sbjct: 307 AKFDSWFLALVAALTFAVATLGINVVANFVSPAFDFANVFPKHIDFKRGGYIAALIALAL 366 Query: 371 YPFAPWEGSAASFVGLIGATMGPIFGIMMVDYYLIAKGRVNVPALYQEDGEYRFQNGWNV 430 YPFAPWEG AA FV +IG TMGPIFG+MMVDYYLI KGRV+V ALY+EDGE+RF+NGW+V Sbjct: 367 YPFAPWEGGAAHFVNMIGNTMGPIFGVMMVDYYLIRKGRVDVDALYREDGEFRFENGWHV 426 Query: 431 SALIAAAIGALFSSVLPNFTSILPAWWAVYGWFFGVGIAGAVYYALR 477 +ALIAA IG +FSS+LP TS++P WW VYGWFFGV IAGA+YYALR Sbjct: 427 NALIAAGIGIVFSSILPGLTSVMPTWWGVYGWFFGVAIAGAIYYALR 473 >ref|YP_004547870.1| permease for cytosine/purines uracil thiamine allantoin [Sinorhizobium meliloti AK83] gb|AEG52256.1| permease for cytosine/purines uracil thiamine allantoin [Sinorhizobium meliloti AK83] Length = 485 Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/467 (82%), Positives = 425/467 (91%) Query: 11 ASPSLYNDDLAPARERNWGAFSIFNVWTSDVHSLWGYYLAASLFLLCGSFVNFILAIGVG 70 ASP LYN+DLAPA+ERNWGAFSIFNVWTSDVHSLWGYYLAASLFL CGSF+NF+LAIG+G Sbjct: 7 ASPQLYNEDLAPAKERNWGAFSIFNVWTSDVHSLWGYYLAASLFLFCGSFMNFLLAIGIG 66 Query: 71 SLVIFVLMSLIGNAGVKTGVPYPVLARASFGVWGANIPALVRAVVACFWYGAQTAAASGA 130 SL+IF LM L+G AGV+TGVP+PVLARASFG+WGAN PA+VRA+VACFWYGAQTAAASGA Sbjct: 67 SLIIFFLMQLVGVAGVRTGVPFPVLARASFGIWGANFPAIVRAIVACFWYGAQTAAASGA 126 Query: 131 IVALLTRIDSFKAFHQSSHMLGHSTLEVICFVVIWALQLLIIQRGMETVRRFQDWAGPAV 190 IVALL R +S FHQSSHMLGHSTLE++C+VV+W LQLLIIQ GMETVR+FQDWAGPAV Sbjct: 127 IVALLVRNESLLQFHQSSHMLGHSTLELVCYVVVWGLQLLIIQNGMETVRKFQDWAGPAV 186 Query: 191 WLMMLILAIYLCIAAGGISLTAPIPQDVLLEKTKEAGVPGVPGSFPALCAVAATWITYFA 250 W+MML+LAIYL + AGG S + IP DVLLEKTK AGVPGVPGSF AL AVAA W+TYF+ Sbjct: 187 WVMMLLLAIYLVVKAGGFSFSHTIPMDVLLEKTKNAGVPGVPGSFAALGAVAAIWVTYFS 246 Query: 251 ALYLNFCDFSRYAPDVRALRKGNIWGLPVNLILFSLVAGVTTIAAFNVYHEVLLHPDQIS 310 ALYLNFCDFSRY P R+L+ GN+WGLPVNLILFSLVAGVTTIAAFNVY EVLLHPDQIS Sbjct: 247 ALYLNFCDFSRYCPSERSLKVGNLWGLPVNLILFSLVAGVTTIAAFNVYGEVLLHPDQIS 306 Query: 311 AKFDSWFLALLAAVTFAVATLGINVVANFVSPAFDFSNVFPRHIDFKKGGYIAALIALAL 370 AKFDSWFLALLAA+TFAVATLGINVVANFVSPAFDF+NVFP HIDFKKGGYIAALIALAL Sbjct: 307 AKFDSWFLALLAALTFAVATLGINVVANFVSPAFDFANVFPTHIDFKKGGYIAALIALAL 366 Query: 371 YPFAPWEGSAASFVGLIGATMGPIFGIMMVDYYLIAKGRVNVPALYQEDGEYRFQNGWNV 430 YPFAPWEG AA FV +IG TMGPIFG+MMVDYYLI KGRV+V ALY+EDGE+RF+NGW+V Sbjct: 367 YPFAPWEGGAAHFVNMIGNTMGPIFGVMMVDYYLIRKGRVDVEALYREDGEFRFENGWHV 426 Query: 431 SALIAAAIGALFSSVLPNFTSILPAWWAVYGWFFGVGIAGAVYYALR 477 +ALIAA IG +FSS+LP TS++PAWW VYGWFFGV IAGA+YYALR Sbjct: 427 NALIAAGIGIVFSSILPGLTSVMPAWWGVYGWFFGVAIAGAIYYALR 473