BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0056.p (192 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767666.1| hypothetical protein bll1026 [Bradyrhizobium ja... 298 3e-79 ref|ZP_08628153.1| hypothetical protein CSIRO_1224 [Bradyrhizobi... 267 6e-70 ref|YP_004681676.1| hypothetical protein CNE_2c14810 [Cupriavidu... 213 2e-53 ref|YP_841006.1| hypothetical protein H16_B1488 [Ralstonia eutro... 212 2e-53 ref|YP_002007928.1| thiol-disulfide oxidoreductase [Cupriavidus ... 207 8e-52 >ref|NP_767666.1| hypothetical protein bll1026 [Bradyrhizobium japonicum USDA 110] dbj|BAC46291.1| bll1026 [Bradyrhizobium japonicum USDA 110] Length = 187 Score = 298 bits (762), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 139/192 (72%), Positives = 160/192 (83%), Gaps = 5/192 (2%) Query: 1 MSLRLIAVSTLVAGLGLGGAVIPGLCTESDAPAQPVPRAIAMTTEQSQTAPEFAGISNWF 60 M+L+L+AVS + G+ + GAVIPG+C E+ A + QTAP+F GI+ WF Sbjct: 1 MTLKLLAVSAALIGMAVTGAVIPGICDEAARAA-----PVVSAAASQQTAPDFTGINTWF 55 Query: 61 NSKPLKLADLRGKVVLVDFWTYGCVNCVNTLPHVTQLYSKYRDRGLVVIGVHTPEFPFEH 120 NSKPL +ADLRGKVVLVDFWTYGCVNCVNTLPHVT LY+KY+D+GLVV+GVHTPEFPFE Sbjct: 56 NSKPLSIADLRGKVVLVDFWTYGCVNCVNTLPHVTDLYAKYKDKGLVVVGVHTPEFPFER 115 Query: 121 SASNVQAALKRHGILYPVAQDNNSQTWNAYRNQYWPAQYVIDQNGKIVFQHAGEGQYDEI 180 SASNVQAALKRHGI YPVAQDN+S+TWNAY NQYWPAQY+IDQ GKIVFQHAGEG+YDEI Sbjct: 116 SASNVQAALKRHGITYPVAQDNDSKTWNAYSNQYWPAQYIIDQTGKIVFQHAGEGRYDEI 175 Query: 181 DRTVARLLDADS 192 DRTVARLL+ S Sbjct: 176 DRTVARLLNTSS 187 >ref|ZP_08628153.1| hypothetical protein CSIRO_1224 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09062.1| hypothetical protein CSIRO_1224 [Bradyrhizobiaceae bacterium SG-6C] Length = 185 Score = 267 bits (682), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 123/190 (64%), Positives = 148/190 (77%), Gaps = 5/190 (2%) Query: 3 LRLIAVSTLVAGLGLGGAVIPGLCTESDAPAQPVPRAIAMTTEQSQTAPEFAGISNWFNS 62 +R + V L L + +PG ++ AQ + A A T APEF G++NW NS Sbjct: 1 MRRFLTTLPVVALALAASTLPGRSDDTSPTAQSIQVADARTA-----APEFTGLTNWQNS 55 Query: 63 KPLKLADLRGKVVLVDFWTYGCVNCVNTLPHVTQLYSKYRDRGLVVIGVHTPEFPFEHSA 122 PL +A LRGKVVLV+FWTYGCVNCVNTLPHVTQLY+KY+D+GLV++GVHTPEFPFE S Sbjct: 56 GPLTIAGLRGKVVLVNFWTYGCVNCVNTLPHVTQLYAKYKDKGLVIVGVHTPEFPFERST 115 Query: 123 SNVQAALKRHGILYPVAQDNNSQTWNAYRNQYWPAQYVIDQNGKIVFQHAGEGQYDEIDR 182 SNVQAALKRHGI YPVAQDNNS TWNA+RNQYWPAQY++DQ+G++V+ HAGEG YDEIDR Sbjct: 116 SNVQAALKRHGITYPVAQDNNSATWNAWRNQYWPAQYIVDQSGRVVYSHAGEGAYDEIDR 175 Query: 183 TVARLLDADS 192 TV +LL+A S Sbjct: 176 TVGKLLNAQS 185 >ref|YP_004681676.1| hypothetical protein CNE_2c14810 [Cupriavidus necator N-1] gb|AEI80444.1| hypothetical protein CNE_2c14810 [Cupriavidus necator N-1] Length = 172 Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 93/139 (66%), Positives = 110/139 (79%) Query: 50 APEFAGISNWFNSKPLKLADLRGKVVLVDFWTYGCVNCVNTLPHVTQLYSKYRDRGLVVI 109 APEF GI W N++PL +A LRGKVVLVDFWTY C+NC+NTLPHV Q Y KYRD+GLVV+ Sbjct: 30 APEFTGIDKWLNAEPLTVAGLRGKVVLVDFWTYSCINCINTLPHVRQWYDKYRDKGLVVV 89 Query: 110 GVHTPEFPFEHSASNVQAALKRHGILYPVAQDNNSQTWNAYRNQYWPAQYVIDQNGKIVF 169 GVHTPEFPFE S +NVQAALKR I YPVAQDN TWNA+RNQYWPA Y++D NG +V+ Sbjct: 90 GVHTPEFPFEKSTANVQAALKRFDIRYPVAQDNAYATWNAWRNQYWPALYLVDANGTVVY 149 Query: 170 QHAGEGQYDEIDRTVARLL 188 +H GEG Y E + + + L Sbjct: 150 KHFGEGSYAETEAAIQKAL 168 >ref|YP_841006.1| hypothetical protein H16_B1488 [Ralstonia eutropha H16] emb|CAJ96276.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 172 Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 93/139 (66%), Positives = 110/139 (79%) Query: 50 APEFAGISNWFNSKPLKLADLRGKVVLVDFWTYGCVNCVNTLPHVTQLYSKYRDRGLVVI 109 APEF GI W NS+PL +A LRGKVVLVDFWTY C+NC+NTLPHV Q Y KYRD+GLVV+ Sbjct: 30 APEFTGIDKWLNSEPLTVAGLRGKVVLVDFWTYSCINCINTLPHVRQWYDKYRDKGLVVV 89 Query: 110 GVHTPEFPFEHSASNVQAALKRHGILYPVAQDNNSQTWNAYRNQYWPAQYVIDQNGKIVF 169 GVHTPEFPFE S +NVQAALKR I YPVAQDN TWNA+RNQYWPA Y++D NG +V+ Sbjct: 90 GVHTPEFPFEKSTANVQAALKRFDIRYPVAQDNAYATWNAWRNQYWPALYLVDANGTVVY 149 Query: 170 QHAGEGQYDEIDRTVARLL 188 +H GEG Y + + + + L Sbjct: 150 KHFGEGNYAQTEAAIQKAL 168 >ref|YP_002007928.1| thiol-disulfide oxidoreductase [Cupriavidus taiwanensis LMG 19424] emb|CAQ71872.1| putative Thiol-disulfide oxidoreductase [Cupriavidus taiwanensis LMG 19424] Length = 179 Score = 207 bits (526), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 91/139 (65%), Positives = 109/139 (78%) Query: 50 APEFAGISNWFNSKPLKLADLRGKVVLVDFWTYGCVNCVNTLPHVTQLYSKYRDRGLVVI 109 APEF GI W NS+PL +A LRGKVVLVDFWTY C+NC+NTLPHV + Y KYRD+GLVV+ Sbjct: 37 APEFTGIGKWLNSEPLTVAGLRGKVVLVDFWTYSCINCINTLPHVRKWYDKYRDQGLVVV 96 Query: 110 GVHTPEFPFEHSASNVQAALKRHGILYPVAQDNNSQTWNAYRNQYWPAQYVIDQNGKIVF 169 GVHTPE+ FE S NVQAALKR I YPVAQDN TWNA+RNQYWPA Y++D +G +V+ Sbjct: 97 GVHTPEYAFERSTGNVQAALKRFDIRYPVAQDNAYATWNAWRNQYWPALYLVDADGNVVY 156 Query: 170 QHAGEGQYDEIDRTVARLL 188 +H GEGQY E + + + L Sbjct: 157 KHFGEGQYAETEAAIQKAL 175