BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0049.p (394 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001208651.1| putative acyl-CoA dehydrogenase [Bradyrhizob... 728 0.0 ref|YP_001236875.1| putative acyl-CoA dehydrogenase [Bradyrhizob... 720 0.0 ref|NP_767661.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicu... 703 0.0 ref|YP_004111261.1| acyl-CoA dehydrogenase domain-containing pro... 682 0.0 ref|YP_001994247.1| acyl-CoA dehydrogenase domain-containing pro... 682 0.0 >ref|YP_001208651.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL80436.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] Length = 399 Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/394 (90%), Positives = 374/394 (94%) Query: 1 MADLEKFRAETRAWLEQNCPAEMRKPMASDGDTFWGGRNTKFSSEAQRVWFERMRDKGWT 60 +ADL+ FR ETRAWLE NCP EMR+PM SD DTFWGGRN KFSSE QR+WFERMRDKGWT Sbjct: 6 LADLDTFRRETRAWLEANCPPEMRRPMTSDEDTFWGGRNAKFSSEPQRIWFERMRDKGWT 65 Query: 61 VPHWPKEYGGGGLDGEEAKIVRQEMAAIGARQPLTSFGISMLGPALLKYGTEEQKKEHLP 120 VPHWPKEYGGGGLDGEEAKIVRQEMAAIGAR P+TSFGISMLGPALLKYGT+ QK+EHLP Sbjct: 66 VPHWPKEYGGGGLDGEEAKIVRQEMAAIGARAPITSFGISMLGPALLKYGTDAQKREHLP 125 Query: 121 KITAGLIRWCQGYSEPNAGSDLASLQTRAVGDGDDYIINGQKIWTSYANYADWIFCLVRT 180 KITAGLIRWCQGYSEPNAGSDLASLQTRA DGDDYIINGQKIWTSYANYADWIFCLVRT Sbjct: 126 KITAGLIRWCQGYSEPNAGSDLASLQTRAESDGDDYIINGQKIWTSYANYADWIFCLVRT 185 Query: 181 DPAAKKHDGISFILFDMTSKGVSTKPILLISGYSPFCETFFDNVRVPKSHVVGSVNRGWD 240 DPAAKKHDGISFILFDMTSKGVSTKPILLISG SPFCETFFDNVRVPK++V+G+VNRGWD Sbjct: 186 DPAAKKHDGISFILFDMTSKGVSTKPILLISGRSPFCETFFDNVRVPKANVLGTVNRGWD 245 Query: 241 VAKYLLQHERAMISGMGERGVGRPLGQIAADSVGADAQGKLDDAQLRSQIASFEVDEAAL 300 VAKYLLQHERAMISGMGERG RPLGQ+AADSVG+DAQGKLDDA LR+QIA+F+VDEAAL Sbjct: 246 VAKYLLQHERAMISGMGERGGSRPLGQVAADSVGSDAQGKLDDALLRAQIATFDVDEAAL 305 Query: 301 AAAAERAVDLAKAGQSHPAFSSAMKYYGTELNKRRYEILMSAGGIDALEWESDRSKGGAR 360 AAAAER VDLAKAGQ HPAFSSAMKYYGTELNKRR+EILMSAGGIDALEWES+RS GAR Sbjct: 306 AAAAERMVDLAKAGQGHPAFSSAMKYYGTELNKRRHEILMSAGGIDALEWESERSGEGAR 365 Query: 361 PRAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA 394 PRAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA Sbjct: 366 PRAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA 399 >ref|YP_001236875.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ32969.1| putative acyl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 394 Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/394 (89%), Positives = 371/394 (94%) Query: 1 MADLEKFRAETRAWLEQNCPAEMRKPMASDGDTFWGGRNTKFSSEAQRVWFERMRDKGWT 60 MADL+ FR ETR WLE NCP EMR+PM S+ DTFWGGRN KFSSE QR+WFERMRDKGWT Sbjct: 1 MADLDTFRRETRNWLEANCPPEMRQPMTSEEDTFWGGRNAKFSSEPQRIWFERMRDKGWT 60 Query: 61 VPHWPKEYGGGGLDGEEAKIVRQEMAAIGARQPLTSFGISMLGPALLKYGTEEQKKEHLP 120 VPHWP+EYGGGGLDGEEAKI+RQEMAAIGAR P+TSFGISMLGPALLKYGT+ QK+EHLP Sbjct: 61 VPHWPREYGGGGLDGEEAKILRQEMAAIGARAPITSFGISMLGPALLKYGTDAQKREHLP 120 Query: 121 KITAGLIRWCQGYSEPNAGSDLASLQTRAVGDGDDYIINGQKIWTSYANYADWIFCLVRT 180 KITAGLIRWCQGYSEPNAGSDLASLQTRA DGDDYIINGQKIWTSYANYADWIFCLVRT Sbjct: 121 KITAGLIRWCQGYSEPNAGSDLASLQTRAESDGDDYIINGQKIWTSYANYADWIFCLVRT 180 Query: 181 DPAAKKHDGISFILFDMTSKGVSTKPILLISGYSPFCETFFDNVRVPKSHVVGSVNRGWD 240 DP AKKHDGISFILFDMTSKGVSTKPILLISG SPFCETFFDNVRVPK++VVG+VNRGWD Sbjct: 181 DPTAKKHDGISFILFDMTSKGVSTKPILLISGRSPFCETFFDNVRVPKANVVGTVNRGWD 240 Query: 241 VAKYLLQHERAMISGMGERGVGRPLGQIAADSVGADAQGKLDDAQLRSQIASFEVDEAAL 300 VAKYLLQHERAMISGMGERG RPLGQ+AADSVG+D QG+LDDA LR+QIA+F+VDEAAL Sbjct: 241 VAKYLLQHERAMISGMGERGGSRPLGQVAADSVGSDGQGRLDDALLRAQIATFDVDEAAL 300 Query: 301 AAAAERAVDLAKAGQSHPAFSSAMKYYGTELNKRRYEILMSAGGIDALEWESDRSKGGAR 360 AAAAER VDLAKAGQ HPAFSSAMKYYGTELNKRR+EILMSAGGIDALEWES+RS GAR Sbjct: 301 AAAAERMVDLAKAGQGHPAFSSAMKYYGTELNKRRHEILMSAGGIDALEWESERSGEGAR 360 Query: 361 PRAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA 394 PRAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA Sbjct: 361 PRAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA 394 >ref|NP_767661.1| acyl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC46286.1| blr1021 [Bradyrhizobium japonicum USDA 110] Length = 404 Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/393 (87%), Positives = 361/393 (91%) Query: 2 ADLEKFRAETRAWLEQNCPAEMRKPMASDGDTFWGGRNTKFSSEAQRVWFERMRDKGWTV 61 ADLE FR ETRAWLE NCP EMR+P SD D FWGGRN KFSSE QR+WFERMRDKGWTV Sbjct: 12 ADLETFRNETRAWLEANCPPEMRRPATSDADVFWGGRNAKFSSEPQRIWFERMRDKGWTV 71 Query: 62 PHWPKEYGGGGLDGEEAKIVRQEMAAIGARQPLTSFGISMLGPALLKYGTEEQKKEHLPK 121 P WPKEYGGGGL E K++R EMA +GAR PL+SFGI MLGPALLKYG E QKKEHLP Sbjct: 72 PDWPKEYGGGGLSAAEHKVLRAEMAKMGARPPLSSFGIWMLGPALLKYGNEAQKKEHLPN 131 Query: 122 ITAGLIRWCQGYSEPNAGSDLASLQTRAVGDGDDYIINGQKIWTSYANYADWIFCLVRTD 181 I AGLIRWCQGYSEPNAGSDLASLQTRA DGDD++I G KIWTSYANYADWIFCLVRTD Sbjct: 132 IAAGLIRWCQGYSEPNAGSDLASLQTRAESDGDDFVITGSKIWTSYANYADWIFCLVRTD 191 Query: 182 PAAKKHDGISFILFDMTSKGVSTKPILLISGYSPFCETFFDNVRVPKSHVVGSVNRGWDV 241 PAAKKHDGISFILFDMTSKGV+TKPILLISGYSPFCETFFD VRVPKSHVVG+VNRGWDV Sbjct: 192 PAAKKHDGISFILFDMTSKGVTTKPILLISGYSPFCETFFDGVRVPKSHVVGTVNRGWDV 251 Query: 242 AKYLLQHERAMISGMGERGVGRPLGQIAADSVGADAQGKLDDAQLRSQIASFEVDEAALA 301 AKYLLQHERAMISGMGERGVGRPLGQIAADSVG+DAQG+LDDA LR +IASF+VDEAALA Sbjct: 252 AKYLLQHERAMISGMGERGVGRPLGQIAADSVGSDAQGRLDDAMLRGKIASFDVDEAALA 311 Query: 302 AAAERAVDLAKAGQSHPAFSSAMKYYGTELNKRRYEILMSAGGIDALEWESDRSKGGARP 361 A AERAVDLAKAGQ+HPAFSSAMKYYGTELNKRRYEILMSAGG+DALEWESDRS+ GARP Sbjct: 312 ACAERAVDLAKAGQAHPAFSSAMKYYGTELNKRRYEILMSAGGVDALEWESDRSRQGARP 371 Query: 362 RAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA 394 RAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA Sbjct: 372 RAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA 404 >ref|YP_004111261.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gb|ADU46528.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 394 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/394 (85%), Positives = 358/394 (90%) Query: 1 MADLEKFRAETRAWLEQNCPAEMRKPMASDGDTFWGGRNTKFSSEAQRVWFERMRDKGWT 60 M DL+ FRAETRAWLE NCPAEMR PM D D FWGGRN KF+SEAQ+VWFERMRDKGWT Sbjct: 1 MTDLDTFRAETRAWLEANCPAEMRTPMQGDEDNFWGGRNAKFASEAQKVWFERMRDKGWT 60 Query: 61 VPHWPKEYGGGGLDGEEAKIVRQEMAAIGARQPLTSFGISMLGPALLKYGTEEQKKEHLP 120 VP WP +YGGGGLDG + K++R+EMAAIGAR PL+SFGI MLGPALLKYG E+QK EHLP Sbjct: 61 VPDWPTQYGGGGLDGAQHKVLREEMAAIGARPPLSSFGIWMLGPALLKYGNEQQKAEHLP 120 Query: 121 KITAGLIRWCQGYSEPNAGSDLASLQTRAVGDGDDYIINGQKIWTSYANYADWIFCLVRT 180 KI G IRWCQGYSEPNAGSDLASLQTRAV DGDD+IING KIWTSYANYADWIFCLVRT Sbjct: 121 KIARGEIRWCQGYSEPNAGSDLASLQTRAVPDGDDFIINGSKIWTSYANYADWIFCLVRT 180 Query: 181 DPAAKKHDGISFILFDMTSKGVSTKPILLISGYSPFCETFFDNVRVPKSHVVGSVNRGWD 240 DPAAKKHDGISFILFDMTS GV+TKPILLISG SPFCETFFDNVRVP+SHVVG++NRGWD Sbjct: 181 DPAAKKHDGISFILFDMTSPGVTTKPILLISGKSPFCETFFDNVRVPQSHVVGTINRGWD 240 Query: 241 VAKYLLQHERAMISGMGERGVGRPLGQIAADSVGADAQGKLDDAQLRSQIASFEVDEAAL 300 VAKYLLQHERAMISGMG R GRPLGQ+AADS+G DAQG+LDD LR QIA+F+VDEAAL Sbjct: 241 VAKYLLQHERAMISGMGGRDGGRPLGQVAADSLGTDAQGRLDDPILRGQIATFDVDEAAL 300 Query: 301 AAAAERAVDLAKAGQSHPAFSSAMKYYGTELNKRRYEILMSAGGIDALEWESDRSKGGAR 360 A AAERAVDLAKAGQ HPAFSSAMKYYGTELNKRR+EILMSAGGIDALEWES+RS GAR Sbjct: 301 ACAAERAVDLAKAGQLHPAFSSAMKYYGTELNKRRHEILMSAGGIDALEWESERSHDGAR 360 Query: 361 PRAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA 394 RAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA Sbjct: 361 ARAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA 394 >ref|YP_001994247.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris TIE-1] gb|ACF03772.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 394 Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/394 (85%), Positives = 358/394 (90%) Query: 1 MADLEKFRAETRAWLEQNCPAEMRKPMASDGDTFWGGRNTKFSSEAQRVWFERMRDKGWT 60 M DL+ FRAETRAWLE NCPAEMR PM D D FWGGRN KF+SEAQ+VWFERMRDKGWT Sbjct: 1 MTDLDTFRAETRAWLEANCPAEMRTPMQGDEDNFWGGRNAKFASEAQKVWFERMRDKGWT 60 Query: 61 VPHWPKEYGGGGLDGEEAKIVRQEMAAIGARQPLTSFGISMLGPALLKYGTEEQKKEHLP 120 VP WP +YGGGGLDG KI+R+EMAAIGAR PL+SFGI MLGPALLKYG E+QK EHLP Sbjct: 61 VPDWPTQYGGGGLDGARHKILREEMAAIGARSPLSSFGIWMLGPALLKYGNEQQKAEHLP 120 Query: 121 KITAGLIRWCQGYSEPNAGSDLASLQTRAVGDGDDYIINGQKIWTSYANYADWIFCLVRT 180 KI G IRWCQGYSEPNAGSDLASLQTRA DGDD+IING KIWTSYANYADWIFCLVRT Sbjct: 121 KIARGEIRWCQGYSEPNAGSDLASLQTRAESDGDDFIINGSKIWTSYANYADWIFCLVRT 180 Query: 181 DPAAKKHDGISFILFDMTSKGVSTKPILLISGYSPFCETFFDNVRVPKSHVVGSVNRGWD 240 DP+AKKHDGISFILFDMTSKGV+TKPILLISG SPFCETFFDNVRVPKSHVVG++NRGWD Sbjct: 181 DPSAKKHDGISFILFDMTSKGVTTKPILLISGKSPFCETFFDNVRVPKSHVVGTINRGWD 240 Query: 241 VAKYLLQHERAMISGMGERGVGRPLGQIAADSVGADAQGKLDDAQLRSQIASFEVDEAAL 300 VAKYLLQHERAMISGMG R GRPLGQ+AADS+G+D QG+LDD LR QIA+F+VDEAAL Sbjct: 241 VAKYLLQHERAMISGMGGRDGGRPLGQVAADSLGSDDQGRLDDPILRGQIATFDVDEAAL 300 Query: 301 AAAAERAVDLAKAGQSHPAFSSAMKYYGTELNKRRYEILMSAGGIDALEWESDRSKGGAR 360 A AAERAVDLAKAGQ HPAFSSAMKYYGTELNKRR+EILMSAGGIDALEWES+RS+ GAR Sbjct: 301 ACAAERAVDLAKAGQLHPAFSSAMKYYGTELNKRRHEILMSAGGIDALEWESERSQEGAR 360 Query: 361 PRAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA 394 RAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA Sbjct: 361 ARAWLRTKANSIEGGTSEVMLGIVAKRILDLPGA 394