BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0046.p (405 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767658.1| hypothetical protein blr1018 [Bradyrhizobium ja... 518 e-144 ref|YP_001994249.1| major facilitator superfamily protein [Rhodo... 508 e-142 ref|YP_571504.1| major facilitator transporter [Rhodopseudomonas... 499 e-139 ref|YP_488272.1| major facilitator transporter [Rhodopseudomonas... 499 e-139 ref|NP_950134.1| transporter [Rhodopseudomonas palustris CGA009]... 497 e-138 >ref|NP_767658.1| hypothetical protein blr1018 [Bradyrhizobium japonicum USDA 110] dbj|BAC46283.1| blr1018 [Bradyrhizobium japonicum USDA 110] Length = 438 Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust. Identities = 298/396 (75%), Positives = 334/396 (84%), Gaps = 1/396 (0%) Query: 10 DESSLGYEGWRIVVVCFLLATFGWGLGFYGQSVYVAELHKLHGWPASLISSGTTFFYLFG 69 DESSL YEGWRIV VCFLLATFGWGLGFYGQSVYVAEL + GWPASLIS+GTTFFYLFG Sbjct: 36 DESSLRYEGWRIVAVCFLLATFGWGLGFYGQSVYVAELQRARGWPASLISAGTTFFYLFG 95 Query: 70 AALVAFVSEAIKAFGARSCLIAGTFAMAIAAVAIGEVREPWQLYLANALLAFGWAGTSLG 129 A LV FV EA++ +G R CLIAGT AMA AAVAIG VREPWQLYLA+A+LAFGWAGTSL Sbjct: 96 ALLVVFVGEAVRKYGPRLCLIAGTLAMAAAAVAIGAVREPWQLYLADAVLAFGWAGTSLA 155 Query: 130 IITNTLGLWFDKKRGMAISLALNGASFGGIVGVPLLVAGIGTFGFSGAMIAAALLLIVVM 189 +ITNT+ LWFD KRGMAISLALNGASFGGIVGVPLLV I GF+ AM A A ++V++ Sbjct: 156 MITNTISLWFDHKRGMAISLALNGASFGGIVGVPLLVTMISHVGFATAMYATAGAMLVLL 215 Query: 190 VPVILILVGRPPAHLHAVTAAAAADAPSATQVRARALRDIRFLSVSIAFALVLFAQVGFI 249 VPVIL+ VGRPP H H AAA A S+ Q+RA ALRD+ FL+V+IAFALVLFAQVGFI Sbjct: 216 VPVILLAVGRPPEH-HGWHAAAKAKPQSSAQIRAHALRDVGFLTVTIAFALVLFAQVGFI 274 Query: 250 VHLIAHLDQVIGRERATVAMALLTAMAVVGRVSFSFVIDRLNQRLASALSFVSQAIALAV 309 VHLI+ LD VIGRERA VA+A+LTAMAVVGRV FS VIDRLNQRLASALSF+SQA AL V Sbjct: 275 VHLISFLDPVIGRERAAVAVAVLTAMAVVGRVLFSMVIDRLNQRLASALSFLSQAAALCV 334 Query: 310 IINVHNDVAQIAACALFGFSVGNLITLPALIVQREFDPRAFGVLVSLLTAINQITYAFGP 369 +IN+HND IAACA+FGFSVGNLITLP+LIVQ+EFD +FGVL+SL TAINQ+TYAFGP Sbjct: 335 VINLHNDYVLIAACAVFGFSVGNLITLPSLIVQQEFDSASFGVLISLNTAINQVTYAFGP 394 Query: 370 GVVGLLRDLSGSYSLPFYGCIGLELIAAVTIMTKGK 405 GVVG LRD SG Y+LPFY C+ LE+ AA IM +GK Sbjct: 395 GVVGFLRDFSGGYALPFYLCVALEVAAAALIMVRGK 430 >ref|YP_001994249.1| major facilitator superfamily protein [Rhodopseudomonas palustris TIE-1] gb|ACF03774.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris TIE-1] Length = 405 Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust. Identities = 266/400 (66%), Positives = 323/400 (80%), Gaps = 1/400 (0%) Query: 4 SSPTLHDESSLGYEGWRIVVVCFLLATFGWGLGFYGQSVYVAELHKLHGWPASLISSGTT 63 ++PT DE+S Y GWRIV VCF++ATFGWGLGFYGQSVY+AEL +LHGWP+S I++ TT Sbjct: 3 TTPT-PDETSFRYHGWRIVAVCFIVATFGWGLGFYGQSVYLAELARLHGWPSSQIATATT 61 Query: 64 FFYLFGAALVAFVSEAIKAFGARSCLIAGTFAMAIAAVAIGEVREPWQLYLANALLAFGW 123 FFYL GA LVAFV + I+A GAR+CL+ G AMA+ V +G + PWQLY +A+LA GW Sbjct: 62 FFYLAGALLVAFVGDVIRAIGARACLLGGIAAMALGTVLLGRIDAPWQLYAVDAILAVGW 121 Query: 124 AGTSLGIITNTLGLWFDKKRGMAISLALNGASFGGIVGVPLLVAGIGTFGFSGAMIAAAL 183 AGTSLG ITNTLGLWFD++RGMAISLALNGASFGGI GVP+LVA IG GF+GA AAA+ Sbjct: 122 AGTSLGAITNTLGLWFDQRRGMAISLALNGASFGGIAGVPVLVALIGALGFTGATTAAAI 181 Query: 184 LLIVVMVPVILILVGRPPAHLHAVTAAAAADAPSATQVRARALRDIRFLSVSIAFALVLF 243 +V+++P++ ++V PP A +AA A A S+ +R+ ALRD+ FL+ +IAF+LVLF Sbjct: 182 AAVVLLMPLVALIVAAPPHLASAESAATAPRALSSGAIRSDALRDLDFLTATIAFSLVLF 241 Query: 244 AQVGFIVHLIAHLDQVIGRERATVAMALLTAMAVVGRVSFSFVIDRLNQRLASALSFVSQ 303 AQVGFIVHLIA+LD +IGRERA VAM+LLTAMAVVGRVS S VIDRLNQRL SALSF SQ Sbjct: 242 AQVGFIVHLIAYLDPLIGRERAAVAMSLLTAMAVVGRVSLSVVIDRLNQRLVSALSFASQ 301 Query: 304 AIALAVIINVHNDVAQIAACALFGFSVGNLITLPALIVQREFDPRAFGVLVSLLTAINQI 363 A+AL V+I+ + + ACALFGFSVGNLITLP+LI+QREF +FGVLV+L TAINQ+ Sbjct: 302 AMALGVLISTRDATLLLVACALFGFSVGNLITLPSLIIQREFPTSSFGVLVALNTAINQV 361 Query: 364 TYAFGPGVVGLLRDLSGSYSLPFYGCIGLELIAAVTIMTK 403 TYAFGPGV+GLLRD SGSY+LPF GCI L+L AA IM + Sbjct: 362 TYAFGPGVIGLLRDASGSYTLPFAGCIALQLAAAALIMVR 401 >ref|YP_571504.1| major facilitator transporter [Rhodopseudomonas palustris BisB5] gb|ABE41603.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris BisB5] Length = 405 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/398 (66%), Positives = 314/398 (78%), Gaps = 1/398 (0%) Query: 9 HDESSLGYEGWRIVVVCFLLATFGWGLGFYGQSVYVAELHKLHGWPASLISSGTTFFYLF 68 DE+S+ Y GWRIV VCF +ATFGW GFYGQSVY+AEL +LHGWP+SLI++ TTFFYL Sbjct: 7 DDETSIRYGGWRIVAVCFAVATFGWAFGFYGQSVYLAELTRLHGWPSSLIATATTFFYLG 66 Query: 69 GAALVAFVSEAIKAFGARSCLIAGTFAMAIAAVAIGEVREPWQLYLANALLAFGWAGTSL 128 GA LVAFV +AI+ GAR+CL+ G AMA+ +G + WQLY LLA GWAGTSL Sbjct: 67 GALLVAFVGDAIRMIGARACLLGGIAAMALGTALLGRIDALWQLYAVYVLLAIGWAGTSL 126 Query: 129 GIITNTLGLWFDKKRGMAISLALNGASFGGIVGVPLLVAGIGTFGFSGAMIAAALLLIVV 188 G +T+TLGLWFD++RGMAISLALNGASFGGI GVPLLVA I GF+GA +AAA++ +VV Sbjct: 127 GAVTSTLGLWFDQRRGMAISLALNGASFGGIAGVPLLVAAIEHLGFAGATLAAAVVSVVV 186 Query: 189 MVPVILILVGRPPAHLHAVTAAAAA-DAPSATQVRARALRDIRFLSVSIAFALVLFAQVG 247 ++P++ I VGRPP A A A A S+ +R A RD FL+V+IAFALVLFAQVG Sbjct: 187 LMPIVAIFVGRPPQRAAAHAAGPGAVQALSSGAIRRHAFRDTAFLTVTIAFALVLFAQVG 246 Query: 248 FIVHLIAHLDQVIGRERATVAMALLTAMAVVGRVSFSFVIDRLNQRLASALSFVSQAIAL 307 FIVHLIA+LD ++GRERA VA++LLT MAVVGRVS S VIDRL+QRL SA+SF SQA AL Sbjct: 247 FIVHLIAYLDPLVGRERAAVAVSLLTTMAVVGRVSLSTVIDRLDQRLVSAISFASQAAAL 306 Query: 308 AVIINVHNDVAQIAACALFGFSVGNLITLPALIVQREFDPRAFGVLVSLLTAINQITYAF 367 A++I + + ACALFGFSVGNLITLPALIVQREF P +FGVLVSL TAINQ+TYAF Sbjct: 307 AIVILSRDATLLLVACALFGFSVGNLITLPALIVQREFAPGSFGVLVSLNTAINQVTYAF 366 Query: 368 GPGVVGLLRDLSGSYSLPFYGCIGLELIAAVTIMTKGK 405 GPGVVGLLRD SGSY+ PF GCI L+LIAA+ +M +G+ Sbjct: 367 GPGVVGLLRDASGSYTAPFLGCIALQLIAAMLVMVRGR 404 >ref|YP_488272.1| major facilitator transporter [Rhodopseudomonas palustris HaA2] gb|ABD09361.1| Major facilitator superfamily MFS_1 [Rhodopseudomonas palustris HaA2] Length = 404 Score = 499 bits (1284), Expect = e-139, Method: Compositional matrix adjust. Identities = 265/399 (66%), Positives = 318/399 (79%), Gaps = 2/399 (0%) Query: 8 LHDESSLGYEGWRIVVVCFLLATFGWGLGFYGQSVYVAELHKLHGWPASLISSGTTFFYL 67 L DESS+ YEGWRIV +CF +ATFGW LGFYGQSVY+AEL +LHGWP+SLI++ TTFFYL Sbjct: 6 LRDESSIRYEGWRIVAMCFAVATFGWALGFYGQSVYLAELTRLHGWPSSLIATATTFFYL 65 Query: 68 FGAALVAFVSEAIKAFGARSCLIAGTFAMAIAAVAIGEVREPWQLYLANALLAFGWAGTS 127 GA LVAFV + I+ G R+CL+ G AMA+ +G + WQLY LLA GWAGTS Sbjct: 66 GGALLVAFVGDVIRVIGPRACLLGGIAAMALGTALLGRIDAVWQLYAVYVLLAVGWAGTS 125 Query: 128 LGIITNTLGLWFDKKRGMAISLALNGASFGGIVGVPLLVAGIGTFGFSGAMIAAALLLIV 187 LG IT+TLGLWFD++RGMAISLALNGASFGGI GVPLLVA IG FGF+ A +AAA+ ++ Sbjct: 126 LGAITSTLGLWFDRRRGMAISLALNGASFGGIAGVPLLVAAIGHFGFADATLAAAIAGVL 185 Query: 188 VMVPVILILVGRPPAHLHAVTAA-AAADAPSATQVRARALRDIRFLSVSIAFALVLFAQV 246 +M PV+ I+VGRPP + A A A S+ +R A RDI FL+V+IAFALVLFAQV Sbjct: 186 LM-PVVAIVVGRPPLRIAEHPAGPGAVQALSSGAIRRDAFRDIAFLTVTIAFALVLFAQV 244 Query: 247 GFIVHLIAHLDQVIGRERATVAMALLTAMAVVGRVSFSFVIDRLNQRLASALSFVSQAIA 306 GFIVHLIA+LD +IGRERA A+ALLT MAVVGRVS S VIDRL+QRL SA+SF+SQA+A Sbjct: 245 GFIVHLIAYLDPLIGRERAAAAVALLTTMAVVGRVSLSTVIDRLDQRLVSAISFLSQAVA 304 Query: 307 LAVIINVHNDVAQIAACALFGFSVGNLITLPALIVQREFDPRAFGVLVSLLTAINQITYA 366 LA++I + + ACALFGFSVGNLITLPALIVQREF +FGVL+SL+TAINQ+TYA Sbjct: 305 LAIVILSRDGTLLLIACALFGFSVGNLITLPALIVQREFPAASFGVLISLVTAINQVTYA 364 Query: 367 FGPGVVGLLRDLSGSYSLPFYGCIGLELIAAVTIMTKGK 405 FGPGV+GL+RDLSGSY+LPF GCI L+LIAA +M +G+ Sbjct: 365 FGPGVIGLVRDLSGSYTLPFAGCIVLQLIAAALVMMRGR 403 >ref|NP_950134.1| transporter [Rhodopseudomonas palustris CGA009] emb|CAE30240.1| possible transporter [Rhodopseudomonas palustris CGA009] Length = 403 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 267/400 (66%), Positives = 324/400 (81%), Gaps = 3/400 (0%) Query: 4 SSPTLHDESSLGYEGWRIVVVCFLLATFGWGLGFYGQSVYVAELHKLHGWPASLISSGTT 63 ++PT DE+S Y GWRIV VCF++ATFGWGLGFYGQSVY+AEL +LHGWP+S I++ TT Sbjct: 3 TTPT-PDETSFRYHGWRIVAVCFIVATFGWGLGFYGQSVYLAELARLHGWPSSQIATATT 61 Query: 64 FFYLFGAALVAFVSEAIKAFGARSCLIAGTFAMAIAAVAIGEVREPWQLYLANALLAFGW 123 FFYL GA LVAFV + I+A GAR+CL+ G AMA+ V +G + PWQLY +A+LA GW Sbjct: 62 FFYLAGALLVAFVGDVIRAIGARACLLGGIAAMALGTVLLGRIDAPWQLYAVDAILAVGW 121 Query: 124 AGTSLGIITNTLGLWFDKKRGMAISLALNGASFGGIVGVPLLVAGIGTFGFSGAMIAAAL 183 AGTSLG ITNTLGLWFD++RGMAISLALNGASFGGI GVP+LVA IG GF+GA AAA+ Sbjct: 122 AGTSLGAITNTLGLWFDRRRGMAISLALNGASFGGIAGVPVLVALIGALGFTGATTAAAI 181 Query: 184 LLIVVMVPVILILVGRPPAHLHAVTAAAAADAPSATQVRARALRDIRFLSVSIAFALVLF 243 +V+++P++ ++V PP HL + AAAA A S+ +R+ ALRD+ FL+ +IAF+LVL Sbjct: 182 AAVVLLMPLVAVVVA-PPLHLVS-AAAAAPRALSSGAIRSGALRDLDFLTATIAFSLVLL 239 Query: 244 AQVGFIVHLIAHLDQVIGRERATVAMALLTAMAVVGRVSFSFVIDRLNQRLASALSFVSQ 303 AQVGFIVHLIA+LD +IGRERA VAM+LLTAMAVVGRVS S VIDRLNQRL SALSF SQ Sbjct: 240 AQVGFIVHLIAYLDPLIGRERAAVAMSLLTAMAVVGRVSLSVVIDRLNQRLVSALSFASQ 299 Query: 304 AIALAVIINVHNDVAQIAACALFGFSVGNLITLPALIVQREFDPRAFGVLVSLLTAINQI 363 A+AL V+I+ + + ACALFGFSVGNLITLP+LI+QREF +FGVLV+L TAINQ+ Sbjct: 300 AVALGVLISTRDATLLLVACALFGFSVGNLITLPSLIIQREFPTSSFGVLVALNTAINQV 359 Query: 364 TYAFGPGVVGLLRDLSGSYSLPFYGCIGLELIAAVTIMTK 403 TYAFGPGV+GLLRD SGSY+LPF GCI L+L AA IM + Sbjct: 360 TYAFGPGVIGLLRDASGSYTLPFTGCIALQLAAAALIMVR 399