BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0044.p (414 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001208653.1| major facilitator superfamily permease [Brad... 657 0.0 ref|NP_767657.1| MFS permease [Bradyrhizobium japonicum USDA 110... 654 0.0 ref|YP_001994250.1| major facilitator superfamily protein [Rhodo... 647 0.0 ref|YP_571505.1| major facilitator transporter [Rhodopseudomonas... 645 0.0 ref|NP_950135.1| major facilitator superfamily permease [Rhodops... 629 e-178 >ref|YP_001208653.1| major facilitator superfamily permease [Bradyrhizobium sp. ORS 278] emb|CAL80438.1| Putative permease of the Major Facilitator Superfamily (MFS) family [Bradyrhizobium sp. ORS 278] Length = 404 Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/400 (80%), Positives = 362/400 (90%) Query: 1 MIDVTAADEASDDARARSNVWRLAAAQALTGANSAVIFATGSIVGATLAPDVSLATVPLS 60 MID+T +D+ +DDARAR NV RLA AQALTGANSAVIFATG+IVG T+AP++ LATVP+S Sbjct: 1 MIDLTVSDDTTDDARARRNVARLATAQALTGANSAVIFATGAIVGVTIAPNIGLATVPIS 60 Query: 61 MYVLGLAAGTLPTGAISRAYGRRVAFIIGTFCGTLTGALGAWAILHSSFWLFCGATFLGG 120 MYV+GLAAGTLPTGAISR YGRR AF+IGTFCG +TG LG +AIL SF LFC ATFLGG Sbjct: 61 MYVVGLAAGTLPTGAISRRYGRRAAFLIGTFCGAVTGVLGCFAILRGSFALFCLATFLGG 120 Query: 121 LYGAVAQSYRFAAADGASVAFRPKAVSWVMAGGVFAGVLGPQLVQWTMDIWPPYLFAFSF 180 LYGAVAQSYRFAAADGAS FRPKAVSWVMAGG+FAG+LGPQLVQWTMD+W PYLFAFS+ Sbjct: 121 LYGAVAQSYRFAAADGASAEFRPKAVSWVMAGGIFAGLLGPQLVQWTMDVWQPYLFAFSY 180 Query: 181 VMQALVALVAMAVLSGVDAPKPAAADLHGGRPLLEIAKQPRFIAAALCGVIAYPMMNLVM 240 ++QA VAL+AM +++GVD PKP AADLHGGRPL EI +QPRFIAAALCG IAYP+MNLVM Sbjct: 181 LVQAAVALIAMGIVAGVDLPKPVAADLHGGRPLFEIVRQPRFIAAALCGTIAYPVMNLVM 240 Query: 241 TSAPLAMKMCGLSVSDSNFGIQWHIVAMYGPSFFTGSLIARFGAPRIVALGLALEALAAM 300 TSAPLAM+MCGL+VSDSNFG+QWHIVAMYGPSFFTG+LIARFGAP IVALGLALEA+AA+ Sbjct: 241 TSAPLAMQMCGLTVSDSNFGLQWHIVAMYGPSFFTGALIARFGAPVIVALGLALEAVAAI 300 Query: 301 IGLSGISVPHFWATLFVLGIGWNFAFVGASALVLETHRPQERNKVQAFNDFLVFGMMAIG 360 IGLSG++ HFWATLF LG+GWNF FVGASALVLETH ERNKVQAFNDFL+FG+MA+G Sbjct: 301 IGLSGLTAMHFWATLFALGVGWNFGFVGASALVLETHTSAERNKVQAFNDFLIFGLMALG 360 Query: 361 SFSSGQLLAHYGWNAVNMVVFPPVLLGLAVLSMASFAKRR 400 SFSSGQLLAH+GW+AVNMVVFPPVLLGL VL++ +KRR Sbjct: 361 SFSSGQLLAHFGWSAVNMVVFPPVLLGLCVLALVWSSKRR 400 >ref|NP_767657.1| MFS permease [Bradyrhizobium japonicum USDA 110] dbj|BAC46282.1| MFS permease [Bradyrhizobium japonicum USDA 110] Length = 417 Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/414 (81%), Positives = 377/414 (91%), Gaps = 4/414 (0%) Query: 1 MIDVTAADEASDDARARSNVWRLAAAQALTGANSAVIFATGSIVGATLAPDVSLATVPLS 60 M+DVT+A++ + DAR R+NV RLAAAQALTGANSAVIFATG+IVGATLAPD+S ATVP+S Sbjct: 3 MLDVTSANQIAADARVRANVVRLAAAQALTGANSAVIFATGAIVGATLAPDMSFATVPIS 62 Query: 61 MYVLGLAAGTLPTGAISRAYGRRVAFIIGTFCGTLTGALGAWAILHSSFWLFCGATFLGG 120 MYV+GLAAGTLPTGAISR +GRR AF+IGT G LTG LG++AILH SF LFC ATFLGG Sbjct: 63 MYVVGLAAGTLPTGAISRRFGRRAAFVIGTGLGALTGLLGSFAILHGSFALFCIATFLGG 122 Query: 121 LYGAVAQSYRFAAADGASVAFRPKAVSWVMAGGVFAGVLGPQLVQWTMDIWPPYLFAFSF 180 LYG+VAQSYRFAAADGASVA+RPKAVSWVMAGGVFAGVLGPQLVQWTMD+W PYLFAFSF Sbjct: 123 LYGSVAQSYRFAAADGASVAYRPKAVSWVMAGGVFAGVLGPQLVQWTMDVWQPYLFAFSF 182 Query: 181 VMQALVALVAMAVLSGVDAPKPAAADLHGGRPLLEIAKQPRFIAAALCGVIAYPMMNLVM 240 ++QA VALVAM +++GVD PKPA ADLHGGRPLL I QPRFIAAALCGVI+YPMMNLVM Sbjct: 183 LVQAAVALVAMGIVAGVDMPKPAPADLHGGRPLLTIVTQPRFIAAALCGVISYPMMNLVM 242 Query: 241 TSAPLAMKMCGLSVSDSNFGIQWHIVAMYGPSFFTGSLIARFGAPRIVALGLALEALAAM 300 TSAPLAMK+CGLSVSDSNFGIQWHIVAMYGPSFFTG+LIARFGAP+IVA GL LEA AA Sbjct: 243 TSAPLAMKLCGLSVSDSNFGIQWHIVAMYGPSFFTGALIARFGAPKIVAAGLLLEAGAAT 302 Query: 301 IGLSGISVPHFWATLFVLGIGWNFAFVGASALVLETHRPQERNKVQAFNDFLVFGMMAIG 360 IGLSG++ HFWATL VLG+GWNF+F+GASALVLETHRPQERNKVQAFNDFLVFGMMAIG Sbjct: 303 IGLSGLTAMHFWATLIVLGVGWNFSFIGASALVLETHRPQERNKVQAFNDFLVFGMMAIG 362 Query: 361 SFSSGQLLAHYGWNAVNMVVFPPVLLGLAVLSMASFAKRRTKLR---AVEEIPD 411 SFSSGQLLA+YGW+AVNMVVFPPV+LGLAVLS+ S+A+RR K R A+ E PD Sbjct: 363 SFSSGQLLANYGWSAVNMVVFPPVVLGLAVLSLVSWARRR-KARLDAAMGEFPD 415 >ref|YP_001994250.1| major facilitator superfamily protein [Rhodopseudomonas palustris TIE-1] gb|ACF03775.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris TIE-1] Length = 415 Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/415 (77%), Positives = 364/415 (87%), Gaps = 1/415 (0%) Query: 1 MIDVTAADEASDDARARSNVWRLAAAQALTGANSAVIFATGSIVGATLAPDVSLATVPLS 60 M+D TA D DDARARSNV RL AAQALTGAN+AVIFATGSI+GA LAP++SLATVPLS Sbjct: 1 MVDATANDIVEDDARARSNVVRLVAAQALTGANAAVIFATGSIIGAQLAPEMSLATVPLS 60 Query: 61 MYVLGLAAGTLPTGAISRAYGRRVAFIIGTFCGTLTGALGAWAILHSSFWLFCGATFLGG 120 MYVLGLAAGTLPTG I+RAYGRRV+F+IGT CGTLTG LGA AIL+ SF LFC ATF+GG Sbjct: 61 MYVLGLAAGTLPTGWIARAYGRRVSFMIGTGCGTLTGVLGAVAILYGSFLLFCVATFIGG 120 Query: 121 LYGAVAQSYRFAAADGASVAFRPKAVSWVMAGGVFAGVLGPQLVQWTMDIWPPYLFAFSF 180 LY AV+QSYRFAAADGAS ++RPKAVSWVMAGGVFAGVLGPQLVQWTMD+W PYLFAFS+ Sbjct: 121 LYAAVSQSYRFAAADGASASYRPKAVSWVMAGGVFAGVLGPQLVQWTMDVWQPYLFAFSY 180 Query: 181 VMQALVALVAMAVLSGVDAPKPAAADLHGGRPLLEIAKQPRFIAAALCGVIAYPMMNLVM 240 V+QA +AL+AMAVL GVDAPKP A+ GGRPLLEIA+QPRFIAAALCG IAYPMMNLVM Sbjct: 181 VVQAAIALIAMAVLWGVDAPKPKPAERAGGRPLLEIARQPRFIAAALCGAIAYPMMNLVM 240 Query: 241 TSAPLAMKMCGLSVSDSNFGIQWHIVAMYGPSFFTGSLIARFGAPRIVALGLALEALAAM 300 TSAPLAM+MCGLSV DSNFG+QWHIVAMY PSF TGSLIA+FGAPR+VA GL LEAL A Sbjct: 241 TSAPLAMQMCGLSVGDSNFGLQWHIVAMYAPSFVTGSLIAKFGAPRVVAAGLVLEALGAS 300 Query: 301 IGLSGISVPHFWATLFVLGIGWNFAFVGASALVLETHRPQERNKVQAFNDFLVFGMMAIG 360 IGL G++ PHFWATLFV+G+GWN AFVGASALVLETH+P E+NKVQAFNDF++FG+MA+G Sbjct: 301 IGLLGVTAPHFWATLFVIGVGWNLAFVGASALVLETHQPNEKNKVQAFNDFIIFGLMALG 360 Query: 361 SFSSGQLLAHYGWNAVNMVVFPPVLLGLAVLSMASFAKRRTKL-RAVEEIPDPSI 414 SFSSGQLLA+YGW VN+ VFPPVLLGL VL++ ++K R ++ A E+ D + Sbjct: 361 SFSSGQLLANYGWTTVNLAVFPPVLLGLIVLAITGWSKVRKRVAEAATELSDRGV 415 >ref|YP_571505.1| major facilitator transporter [Rhodopseudomonas palustris BisB5] gb|ABE41604.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris BisB5] Length = 406 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/400 (79%), Positives = 357/400 (89%) Query: 1 MIDVTAADEASDDARARSNVWRLAAAQALTGANSAVIFATGSIVGATLAPDVSLATVPLS 60 M+D TA D ++DDARARSNV RLAAAQALTGAN+AVIFATGSI+GA LAPD+SLATVP+S Sbjct: 1 MVDATAIDGSADDARARSNVVRLAAAQALTGANAAVIFATGSIIGAQLAPDLSLATVPIS 60 Query: 61 MYVLGLAAGTLPTGAISRAYGRRVAFIIGTFCGTLTGALGAWAILHSSFWLFCGATFLGG 120 MYV+GLAAGTLPTGAI+R YGRR +F+IG CG TG LGA AIL+ SF LFC ATFLGG Sbjct: 61 MYVVGLAAGTLPTGAIARRYGRRASFMIGAGCGAFTGLLGALAILYGSFELFCVATFLGG 120 Query: 121 LYGAVAQSYRFAAADGASVAFRPKAVSWVMAGGVFAGVLGPQLVQWTMDIWPPYLFAFSF 180 LYGAV+QSYRFAAADGASVA+RPKAVSWVMAGGVFAGVLGPQLVQWTMDIW PYLFAFS+ Sbjct: 121 LYGAVSQSYRFAAADGASVAYRPKAVSWVMAGGVFAGVLGPQLVQWTMDIWQPYLFAFSY 180 Query: 181 VMQALVALVAMAVLSGVDAPKPAAADLHGGRPLLEIAKQPRFIAAALCGVIAYPMMNLVM 240 ++QA VAL+AMAVL VDAPKP AD GGRPLLEI +QPRFIAAA+CG IAYPMMNLVM Sbjct: 181 LVQAAVALIAMAVLWSVDAPKPQPADFAGGRPLLEIVRQPRFIAAAMCGAIAYPMMNLVM 240 Query: 241 TSAPLAMKMCGLSVSDSNFGIQWHIVAMYGPSFFTGSLIARFGAPRIVALGLALEALAAM 300 TSAPLAM+MCGL +SDSNFG+QWHIVAMY PSFFTGSLI RFGAPR+VA GL LEAL A Sbjct: 241 TSAPLAMQMCGLPLSDSNFGLQWHIVAMYAPSFFTGSLIVRFGAPRVVAFGLVLEALGAA 300 Query: 301 IGLSGISVPHFWATLFVLGIGWNFAFVGASALVLETHRPQERNKVQAFNDFLVFGMMAIG 360 IGL+GI+ PHFWATLFV+G+GWNFAFVGASALVLETH P E+NKVQAFNDF+VFGMMA+G Sbjct: 301 IGLTGITAPHFWATLFVIGVGWNFAFVGASALVLETHMPNEKNKVQAFNDFVVFGMMALG 360 Query: 361 SFSSGQLLAHYGWNAVNMVVFPPVLLGLAVLSMASFAKRR 400 SF SGQLLA+YGW VNM VFPPVLLGL VL++ ++++R Sbjct: 361 SFLSGQLLANYGWATVNMTVFPPVLLGLVVLAITGWSRKR 400 >ref|NP_950135.1| major facilitator superfamily permease [Rhodopseudomonas palustris CGA009] emb|CAE30241.1| MFS permease family [Rhodopseudomonas palustris CGA009] Length = 415 Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust. Identities = 319/415 (76%), Positives = 362/415 (87%), Gaps = 1/415 (0%) Query: 1 MIDVTAADEASDDARARSNVWRLAAAQALTGANSAVIFATGSIVGATLAPDVSLATVPLS 60 M+D TA D DDARARSNV RL AAQALTGAN+AVIFATGSI+GA LAP++SLATVPLS Sbjct: 1 MVDATANDIVEDDARARSNVVRLVAAQALTGANAAVIFATGSIIGAQLAPEMSLATVPLS 60 Query: 61 MYVLGLAAGTLPTGAISRAYGRRVAFIIGTFCGTLTGALGAWAILHSSFWLFCGATFLGG 120 MYVLGLAAGTLPTG I+RAYGRRV+F+IGT CG LTG LGA AIL+ SF LFC ATF+GG Sbjct: 61 MYVLGLAAGTLPTGWIARAYGRRVSFMIGTGCGALTGVLGAVAILYGSFLLFCVATFIGG 120 Query: 121 LYGAVAQSYRFAAADGASVAFRPKAVSWVMAGGVFAGVLGPQLVQWTMDIWPPYLFAFSF 180 LY AV+QSYRFAAADGAS A+RPKAVSWVMAGGV AGVLGPQLVQWTMD+W PYLFAFS+ Sbjct: 121 LYAAVSQSYRFAAADGASAAYRPKAVSWVMAGGVLAGVLGPQLVQWTMDVWQPYLFAFSY 180 Query: 181 VMQALVALVAMAVLSGVDAPKPAAADLHGGRPLLEIAKQPRFIAAALCGVIAYPMMNLVM 240 V+QA +AL+AMAVL GVDAPKP A+ GGRPLLEI +QPRFIAAALCG IAYPMMNLVM Sbjct: 181 VVQAAIALIAMAVLWGVDAPKPKPAERAGGRPLLEIVRQPRFIAAALCGAIAYPMMNLVM 240 Query: 241 TSAPLAMKMCGLSVSDSNFGIQWHIVAMYGPSFFTGSLIARFGAPRIVALGLALEALAAM 300 TSAPLAM+MCGLSV DSNFG+QWHIVAMY PSF TGSLIA+FGAPR+VA GL LEAL A Sbjct: 241 TSAPLAMQMCGLSVGDSNFGLQWHIVAMYAPSFVTGSLIAKFGAPRVVAAGLVLEALGAS 300 Query: 301 IGLSGISVPHFWATLFVLGIGWNFAFVGASALVLETHRPQERNKVQAFNDFLVFGMMAIG 360 IGL G++ PHFWATLFV+G+GWN AFVGASALVLETH+P E+NKVQAFNDF++FG+MA+G Sbjct: 301 IGLLGVTAPHFWATLFVIGVGWNLAFVGASALVLETHQPNEKNKVQAFNDFIIFGLMALG 360 Query: 361 SFSSGQLLAHYGWNAVNMVVFPPVLLGLAVLSMASFAKRRTKL-RAVEEIPDPSI 414 SFSSGQLLA+YGW VN+ VFPPVLLGL VL++ ++K R ++ AV E+ D + Sbjct: 361 SFSSGQLLANYGWTTVNLAVFPPVLLGLIVLAITGWSKVRKRVAEAVTELSDRGV 415