BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0039.p (164 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767653.1| sulfur oxidation protein [Bradyrhizobium japoni... 237 6e-61 ref|YP_001236869.1| sulfur oxidation protein SoxY domain-contain... 216 1e-54 ref|YP_001208657.1| sulfur oxidation protein SoxY [Bradyrhizobiu... 211 3e-53 ref|YP_578863.1| sulfur oxidation protein [Nitrobacter hamburgen... 205 2e-51 ref|YP_002288181.1| sulfur oxidation protein [Oligotropha carbox... 187 4e-46 >ref|NP_767653.1| sulfur oxidation protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46278.1| sulfur oxidation protein [Bradyrhizobium japonicum USDA 110] Length = 163 Score = 237 bits (604), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 118/161 (73%), Positives = 134/161 (83%) Query: 4 TTSEFFKARRMVLKGAGVAALIGLGVIPFDVPQALAAANDKYPEDAFKQKTEADAIKALY 63 TT+ RR++L+GA AL+GLG +PF V A AAANDKYPE+AFK K EADAIKALY Sbjct: 3 TTTGPLATRRLILQGAASVALLGLGNLPFGVAPAYAAANDKYPEEAFKLKNEADAIKALY 62 Query: 64 GKTAEPSDKVKMDAPEIAENGAVVPISATTTLADVTSISFLVSENPISLVASYRIPAGTL 123 GKTAEPSDKVK+DAPEIAENG VVPIS TTTL VTSISF V+ENP +L ASY+IP GT+ Sbjct: 63 GKTAEPSDKVKLDAPEIAENGGVVPISVTTTLEKVTSISFFVAENPNALAASYKIPDGTI 122 Query: 124 PTIANRIKMAKTSNVTVIVEAGGKLYSAKKEIKVTVGGCGG 164 P +ANR+KMAKT+NVT IVEA GKLYSA KE+KVTVGGCGG Sbjct: 123 PAVANRLKMAKTTNVTAIVEADGKLYSATKEVKVTVGGCGG 163 >ref|YP_001236869.1| sulfur oxidation protein SoxY domain-containing protein [Bradyrhizobium sp. BTAi1] gb|ABQ32963.1| thiosulfate-binding protein SoxY [Bradyrhizobium sp. BTAi1] Length = 164 Score = 216 bits (549), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 106/154 (68%), Positives = 126/154 (81%), Gaps = 1/154 (0%) Query: 12 RRMVLKGAGVAALIGLGVIPFDVPQALAAAND-KYPEDAFKQKTEADAIKALYGKTAEPS 70 RR++LKGAG+ ALIGLG A AA ND KYPEDAF+QK DAIKALYG+ E S Sbjct: 11 RRLLLKGAGLVALIGLGNAVLHAAPAFAATNDNKYPEDAFRQKNATDAIKALYGRDHEAS 70 Query: 71 DKVKMDAPEIAENGAVVPISATTTLADVTSISFLVSENPISLVASYRIPAGTLPTIANRI 130 DK+K+DAPEIAENG VVPI+ TTTL DVTSI+F+V+ENP +L ASY+IP GT+P +ANR+ Sbjct: 71 DKIKLDAPEIAENGGVVPIAVTTTLPDVTSIAFIVAENPNALAASYKIPEGTVPAVANRL 130 Query: 131 KMAKTSNVTVIVEAGGKLYSAKKEIKVTVGGCGG 164 KMAKTS+V +VE+GGKLYSA KE+KVTVGGCGG Sbjct: 131 KMAKTSSVIALVESGGKLYSATKEVKVTVGGCGG 164 >ref|YP_001208657.1| sulfur oxidation protein SoxY [Bradyrhizobium sp. ORS 278] emb|CAL80442.1| Conserved hypothetical protein; possible sulfur oxidation protein precursor SoxY; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 168 Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 104/154 (67%), Positives = 124/154 (80%), Gaps = 1/154 (0%) Query: 12 RRMVLKGAGVAALIGLGVIPFDVPQALAAAND-KYPEDAFKQKTEADAIKALYGKTAEPS 70 RR+ LKGAG+ ALIGLG AA ND KYPEDAF+QK DAIKALYG+ E S Sbjct: 15 RRLFLKGAGLVALIGLGNAVLHAAPVFAATNDNKYPEDAFRQKNAPDAIKALYGRDHEAS 74 Query: 71 DKVKMDAPEIAENGAVVPISATTTLADVTSISFLVSENPISLVASYRIPAGTLPTIANRI 130 DK+K+DAPEIAENG VVPI+ +TTL +VTSISF+V+ENP +L ASY+IP GT+P +ANR+ Sbjct: 75 DKIKLDAPEIAENGGVVPIAVSTTLPNVTSISFIVAENPNALAASYKIPEGTVPAVANRL 134 Query: 131 KMAKTSNVTVIVEAGGKLYSAKKEIKVTVGGCGG 164 KMAKTS+V +VE+GGKLYSA KE+KVTVGGCGG Sbjct: 135 KMAKTSSVIALVESGGKLYSATKEVKVTVGGCGG 168 >ref|YP_578863.1| sulfur oxidation protein [Nitrobacter hamburgensis X14] gb|ABE64403.1| thiosulfate-binding protein SoxY [Nitrobacter hamburgensis X14] Length = 165 Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 111/155 (71%), Positives = 127/155 (81%) Query: 10 KARRMVLKGAGVAALIGLGVIPFDVPQALAAANDKYPEDAFKQKTEADAIKALYGKTAEP 69 +ARR +LKGA V AL GL I F ALAAANDKYP+ AFK K AI+ALYG+ AE Sbjct: 11 EARRQILKGAAVVALAGLAGIRFGFAPALAAANDKYPDAAFKVKGADGAIQALYGRVAEK 70 Query: 70 SDKVKMDAPEIAENGAVVPISATTTLADVTSISFLVSENPISLVASYRIPAGTLPTIANR 129 SDKV+MDAPEIAENGAVVP+S TT+L DVTSIS LV+ENP +L ASYRIPAGT+P++ANR Sbjct: 71 SDKVRMDAPEIAENGAVVPVSVTTSLPDVTSISILVAENPNALAASYRIPAGTMPSVANR 130 Query: 130 IKMAKTSNVTVIVEAGGKLYSAKKEIKVTVGGCGG 164 +KMAKT NV IVEAGGKLYSA KE+KVT+GGCGG Sbjct: 131 LKMAKTGNVIAIVEAGGKLYSASKEVKVTIGGCGG 165 >ref|YP_002288181.1| sulfur oxidation protein [Oligotropha carboxidovorans OM5] ref|YP_004633719.1| hypothetical protein OCA5_c27850 [Oligotropha carboxidovorans OM5] gb|ACI92316.1| sulfur oxidation protein [Oligotropha carboxidovorans OM5] gb|AEI03901.1| hypothetical protein OCA4_c27840 [Oligotropha carboxidovorans OM4] gb|AEI07478.1| hypothetical protein OCA5_c27850 [Oligotropha carboxidovorans OM5] Length = 165 Score = 187 bits (476), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 95/154 (61%), Positives = 118/154 (76%) Query: 11 ARRMVLKGAGVAALIGLGVIPFDVPQALAAANDKYPEDAFKQKTEADAIKALYGKTAEPS 70 +RR +LKGA +A ++G + A AA +P DAFKQK+E D +K LYGK AE S Sbjct: 12 SRRGLLKGAALATVLGASLNVMRSVAAFAADAAGWPTDAFKQKSETDVLKTLYGKAAEVS 71 Query: 71 DKVKMDAPEIAENGAVVPISATTTLADVTSISFLVSENPISLVASYRIPAGTLPTIANRI 130 DKVK+DAPEIAENGAVVPIS +TTL VTSIS +V+ENP +L ASY+IP GT+P+++NR+ Sbjct: 72 DKVKLDAPEIAENGAVVPISISTTLPKVTSISVMVAENPYALAASYKIPEGTMPSVSNRL 131 Query: 131 KMAKTSNVTVIVEAGGKLYSAKKEIKVTVGGCGG 164 KMAKTS V +VE+ GKLYS KE+KVTVGGCGG Sbjct: 132 KMAKTSKVIAVVESDGKLYSTSKEVKVTVGGCGG 165