BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0037.p (285 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001236867.1| diheme cytochrome SoxA [Bradyrhizobium sp. B... 485 e-135 ref|NP_767651.1| sulfur oxidation protein [Bradyrhizobium japoni... 479 e-133 ref|YP_001208659.1| putative cytochrome C/sulfur oxidation prote... 467 e-130 ref|YP_578861.1| sulfur oxidation protein [Nitrobacter hamburgen... 464 e-129 ref|ZP_07027975.1| sulfur oxidation protein [Afipia sp. 1NLS2] >... 433 e-119 >ref|YP_001236867.1| diheme cytochrome SoxA [Bradyrhizobium sp. BTAi1] gb|ABQ32961.1| diheme cytochrome SoxA (sulfur oxidation) [Bradyrhizobium sp. BTAi1] Length = 282 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 228/274 (83%), Positives = 245/274 (89%), Gaps = 1/274 (0%) Query: 12 VTLALGMLACVPARAADSVDPAADKAAFQKFFTTKFPKLKLEDFVNGPYSMNEDLHRQWE 71 V LALG+ A A AAD DP AD AFQ +F KFPK+ +DFVNGPYSMN D+ RQWE Sbjct: 10 VALALGLGASAVA-AADRPDPVADAKAFQDYFVKKFPKVAFDDFVNGPYSMNADMRRQWE 68 Query: 72 EKEQFPPYEFSLEAGKEMFATPFKNGKTYADCFPNKGIGIRQNYPYFDEKEGKVVTLELA 131 EKEQFPPYEF+LEAGKEMFA PFKNGKTYADCFPN GIGIRQNYPYFD+KEGKV+TLELA Sbjct: 69 EKEQFPPYEFALEAGKEMFAKPFKNGKTYADCFPNGGIGIRQNYPYFDDKEGKVITLELA 128 Query: 132 LNRCREANGEAPFSYVKDDMAALTAYMAFTSRGKPMDIKIPNDPRALEAYQKGKEYFYTR 191 LNRCREANGEAP+SYVKD+MA+LTAYMAFTSRGK DIKIP+DPRALEAY+KGKEYFYTR Sbjct: 129 LNRCREANGEAPYSYVKDEMASLTAYMAFTSRGKRFDIKIPDDPRALEAYEKGKEYFYTR 188 Query: 192 RGQLNFSCATCHIQSPGERIRAEVLAPALGILNAMPIYRSEWSGMGTTSRRFTTCNSQIR 251 RGQLNFSCA+CH+QSPGERIRAE+LAPALGILNAMPIYRSEWSGMGT SRR TCNSQ R Sbjct: 189 RGQLNFSCASCHVQSPGERIRAEILAPALGILNAMPIYRSEWSGMGTISRRIVTCNSQTR 248 Query: 252 GVPLNPQDDEYRNLEYYLSYVSNGLPISGPGARP 285 VPL PQ DEYRNLEYYLSYVSNGLP+SGPGARP Sbjct: 249 AVPLEPQSDEYRNLEYYLSYVSNGLPVSGPGARP 282 >ref|NP_767651.1| sulfur oxidation protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46276.1| sulfur oxidation protein [Bradyrhizobium japonicum USDA 110] Length = 288 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 221/260 (85%), Positives = 240/260 (92%) Query: 26 AADSVDPAADKAAFQKFFTTKFPKLKLEDFVNGPYSMNEDLHRQWEEKEQFPPYEFSLEA 85 AAD VDP AD AFQ FF KFP +K EDFVNGPYSMNED+ RQW EKE+FPPYEF+L+A Sbjct: 29 AADKVDPVADAKAFQNFFFQKFPTVKHEDFVNGPYSMNEDMKRQWREKEEFPPYEFALDA 88 Query: 86 GKEMFATPFKNGKTYADCFPNKGIGIRQNYPYFDEKEGKVVTLELALNRCREANGEAPFS 145 GKEMFATPFKNGKTYADCFPN GIGIRQNYPYFDEKEGKVVTLELALNRCREANGEAP+S Sbjct: 89 GKEMFATPFKNGKTYADCFPNGGIGIRQNYPYFDEKEGKVVTLELALNRCREANGEAPYS 148 Query: 146 YVKDDMAALTAYMAFTSRGKPMDIKIPNDPRALEAYQKGKEYFYTRRGQLNFSCATCHIQ 205 YVKD+MA+LTAYMAFTSRGKPMDIKIP+DPRAL A++ GK YFYTRRGQ+NFSCA+CH+Q Sbjct: 149 YVKDEMASLTAYMAFTSRGKPMDIKIPDDPRALAAFENGKRYFYTRRGQMNFSCASCHVQ 208 Query: 206 SPGERIRAEVLAPALGILNAMPIYRSEWSGMGTTSRRFTTCNSQIRGVPLNPQDDEYRNL 265 SPGERIRAE+LAPALGILNAMPIYRSEWSGMGTTSRRF TCNSQ R VPL PQ DEYR++ Sbjct: 209 SPGERIRAEILAPALGILNAMPIYRSEWSGMGTTSRRFVTCNSQTRAVPLEPQADEYRDV 268 Query: 266 EYYLSYVSNGLPISGPGARP 285 EY+LSYV+NGLPISGPGARP Sbjct: 269 EYFLSYVANGLPISGPGARP 288 >ref|YP_001208659.1| putative cytochrome C/sulfur oxidation protein SoxA [Bradyrhizobium sp. ORS 278] emb|CAL80444.1| putative cytochrome C; possible sulfur oxidation protein precursor SoxA [Bradyrhizobium sp. ORS 278] Length = 281 Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust. Identities = 221/275 (80%), Positives = 241/275 (87%), Gaps = 2/275 (0%) Query: 11 IVTLALGMLACVPARAADSVDPAADKAAFQKFFTTKFPKLKLEDFVNGPYSMNEDLHRQW 70 +V ALG A AAD DPA D AFQ +F KFPK+ +DFVNGPYSMN D+ RQW Sbjct: 9 VVAAALGF--GASAAAADKSDPAGDAKAFQDYFVKKFPKVAFDDFVNGPYSMNADMRRQW 66 Query: 71 EEKEQFPPYEFSLEAGKEMFATPFKNGKTYADCFPNKGIGIRQNYPYFDEKEGKVVTLEL 130 EEKEQFPPYEF+LEAGKEMFA PF+NGKTYADCFPN GIGIRQ YPYFD+KEGKVVTLEL Sbjct: 67 EEKEQFPPYEFALEAGKEMFAKPFENGKTYADCFPNGGIGIRQTYPYFDDKEGKVVTLEL 126 Query: 131 ALNRCREANGEAPFSYVKDDMAALTAYMAFTSRGKPMDIKIPNDPRALEAYQKGKEYFYT 190 ALNRCREANGE P+SYVKD+MA+LTAYMA+TSRGK DIKIP+DPRAL+A++KGKEYFYT Sbjct: 127 ALNRCREANGEQPYSYVKDEMASLTAYMAYTSRGKRFDIKIPDDPRALDAFEKGKEYFYT 186 Query: 191 RRGQLNFSCATCHIQSPGERIRAEVLAPALGILNAMPIYRSEWSGMGTTSRRFTTCNSQI 250 RRGQLNFSCA+CH+QSPGERIRAE+LAPALGILNAMPIYRSEWSGMGT SRR TCNSQ Sbjct: 187 RRGQLNFSCASCHVQSPGERIRAEILAPALGILNAMPIYRSEWSGMGTISRRIVTCNSQT 246 Query: 251 RGVPLNPQDDEYRNLEYYLSYVSNGLPISGPGARP 285 R VPL PQ DEYRNLEYYLSYVSNGLP+SGPGARP Sbjct: 247 RAVPLEPQSDEYRNLEYYLSYVSNGLPVSGPGARP 281 >ref|YP_578861.1| sulfur oxidation protein [Nitrobacter hamburgensis X14] gb|ABE64401.1| diheme cytochrome SoxA (sulfur oxidation) [Nitrobacter hamburgensis X14] Length = 286 Score = 464 bits (1195), Expect = e-129, Method: Compositional matrix adjust. Identities = 218/285 (76%), Positives = 247/285 (86%), Gaps = 3/285 (1%) Query: 4 RLAIRATIVTLALGML---ACVPARAADSVDPAADKAAFQKFFTTKFPKLKLEDFVNGPY 60 RL R+ + L L L A + AADS +P AD AFQK+FT KFPKLKL+DFVNGPY Sbjct: 2 RLTFRSAVTGLVLATLTFAAVQISDAADSPNPPADLKAFQKYFTDKFPKLKLKDFVNGPY 61 Query: 61 SMNEDLHRQWEEKEQFPPYEFSLEAGKEMFATPFKNGKTYADCFPNKGIGIRQNYPYFDE 120 SM+ L++QW+EKE+FPPYEF+L AGKE+F PFKNGKT+ADCFPNKGIGIRQNYP FD+ Sbjct: 62 SMDAGLYKQWKEKEEFPPYEFALAAGKELFNKPFKNGKTFADCFPNKGIGIRQNYPTFDK 121 Query: 121 KEGKVVTLELALNRCREANGEAPFSYVKDDMAALTAYMAFTSRGKPMDIKIPNDPRALEA 180 K+GKVVTLELA+N+C E NGE PFSY KD+MA++TAYMAFTSRGKP +IKIPNDPRAL A Sbjct: 122 KQGKVVTLELAVNQCLENNGEKPFSYTKDEMASVTAYMAFTSRGKPFNIKIPNDPRALAA 181 Query: 181 YQKGKEYFYTRRGQLNFSCATCHIQSPGERIRAEVLAPALGILNAMPIYRSEWSGMGTTS 240 Y+ GK YFYTRRGQLNFSCATCH+Q PG+ IRAEVLAPALGILNAMPIYRSEW+GMGTTS Sbjct: 182 YENGKRYFYTRRGQLNFSCATCHVQIPGDHIRAEVLAPALGILNAMPIYRSEWAGMGTTS 241 Query: 241 RRFTTCNSQIRGVPLNPQDDEYRNLEYYLSYVSNGLPISGPGARP 285 RRFT+CNSQ+R VPL PQDDEYR+LEYYLSYVSNGLPISGPGARP Sbjct: 242 RRFTSCNSQVRAVPLTPQDDEYRDLEYYLSYVSNGLPISGPGARP 286 >ref|ZP_07027975.1| sulfur oxidation protein [Afipia sp. 1NLS2] gb|EFI50796.1| sulfur oxidation protein [Afipia sp. 1NLS2] Length = 282 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 202/286 (70%), Positives = 240/286 (83%), Gaps = 8/286 (2%) Query: 3 RRLAIRATIVTLALG--MLACVPARAADSVDPAADKAAFQKFFTTKFPKLKLEDFVNGPY 60 R L + AT++T A +LA + P D AF+K+FT KFPK++L DFVNGPY Sbjct: 2 RHLVVLATVMTCAFAPPLLA-----ETTTTSPEQDFKAFRKYFTDKFPKVELNDFVNGPY 56 Query: 61 SMNEDLHRQWEEKEQFPPYEFSLEAGKEMFATPFKNGKTYADCFPNKGIGIRQNYPYFDE 120 SMNE L +QW EKE FPPY+F+L+ GKE+F PFKNGKT+ADCF NKGIG+RQNYPYFDE Sbjct: 57 SMNEGLRKQWIEKEVFPPYDFALDKGKELFEKPFKNGKTFADCFENKGIGVRQNYPYFDE 116 Query: 121 KEGKVVTLELALNRCREANGEAPFSYVKDDMAALTAYMAFTSRGKPMDIKIP-NDPRALE 179 K +V+TLE+A+N+C E NGE P++Y+KDDMAA+TAYMAFTSRGKP DIKIP N+P+ALE Sbjct: 117 KTNEVITLEVAVNQCLEKNGEKPYNYMKDDMAAVTAYMAFTSRGKPFDIKIPKNNPKALE 176 Query: 180 AYQKGKEYFYTRRGQLNFSCATCHIQSPGERIRAEVLAPALGILNAMPIYRSEWSGMGTT 239 AY+KGK+YF+ RRGQ NFSCA+CH+Q+PGE IRAEVLAPALGILNAMPIYRSEW GMGT Sbjct: 177 AYEKGKQYFFQRRGQFNFSCASCHVQAPGEHIRAEVLAPALGILNAMPIYRSEWGGMGTI 236 Query: 240 SRRFTTCNSQIRGVPLNPQDDEYRNLEYYLSYVSNGLPISGPGARP 285 SRRFT+CNSQ+RGVPL PQD EYRN+EYYLSY++NGLPISGPGARP Sbjct: 237 SRRFTSCNSQVRGVPLKPQDPEYRNVEYYLSYMANGLPISGPGARP 282