BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0094.0029.p         (127 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001207976.1| putative YdjC-like protein [Bradyrhizobium s...   181   4e-44
ref|YP_571240.1| YdjC-like protein [Rhodopseudomonas palustris B...   176   8e-43
ref|YP_578385.1| YdjC-like protein [Nitrobacter hamburgensis X14...   175   2e-42
ref|YP_001237793.1| hypothetical protein BBta_1678 [Bradyrhizobi...   175   2e-42
ref|YP_779805.1| hypothetical protein RPE_0869 [Rhodopseudomonas...   172   2e-41

>ref|YP_001207976.1| putative YdjC-like protein [Bradyrhizobium sp. ORS 278]
 emb|CAL79761.1| Conserved hypothetical protein; putative YdjC-like protein
           [Bradyrhizobium sp. ORS 278]
          Length = 280

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 90/127 (70%), Positives = 102/127 (80%)

Query: 1   VKERAPDAWVRQCGREGPLARQLAAPKALVLNVLSTQFRIKAQRAGLRFNPAFAGAYDFT 60
           VKE AP AWVRQ GR  PL ++LAAPKAL+L+VLS QFR  A RA + FNPAFAGAYDFT
Sbjct: 154 VKEAAPSAWVRQGGRNLPLMQRLAAPKALLLDVLSAQFRRHAARARIPFNPAFAGAYDFT 213

Query: 61  RGNDFAALMQGFLDGLPEDGLVMCHPGFVDETLKSLDPLTTQRETEHAYLAGDDFPALLA 120
           + +DF ALM GFL+ LPEDGLVMCHPGFVD+ L  LDPLT QRE EHAYLAG+ FP LLA
Sbjct: 214 KASDFGALMDGFLNDLPEDGLVMCHPGFVDDVLIELDPLTVQREHEHAYLAGEHFPDLLA 273

Query: 121 LNKVTLA 127
             ++TLA
Sbjct: 274 RRQMTLA 280


>ref|YP_571240.1| YdjC-like protein [Rhodopseudomonas palustris BisB5]
 gb|ABE41339.1| YdjC-like protein [Rhodopseudomonas palustris BisB5]
          Length = 301

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 86/126 (68%), Positives = 98/126 (77%)

Query: 1   VKERAPDAWVRQCGREGPLARQLAAPKALVLNVLSTQFRIKAQRAGLRFNPAFAGAYDFT 60
           VK  AP+AWVRQCGR  PLA++L APK L+L+VLS QFRI+A RAG+ FNP FAGAYDF 
Sbjct: 154 VKAVAPNAWVRQCGRAQPLAQRLGAPKPLLLDVLSRQFRIRATRAGIAFNPGFAGAYDFL 213

Query: 61  RGNDFAALMQGFLDGLPEDGLVMCHPGFVDETLKSLDPLTTQRETEHAYLAGDDFPALLA 120
           R +DF  L+  F DGLP+ GLVMCHPGFVDE L SLDP T QRE EHA+LAGD F  LLA
Sbjct: 214 RESDFEKLLISFFDGLPDGGLVMCHPGFVDEVLTSLDPFTDQREREHAFLAGDRFLPLLA 273

Query: 121 LNKVTL 126
            + VTL
Sbjct: 274 AHNVTL 279


>ref|YP_578385.1| YdjC-like protein [Nitrobacter hamburgensis X14]
 gb|ABE63925.1| YdjC-like protein [Nitrobacter hamburgensis X14]
          Length = 280

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 86/126 (68%), Positives = 102/126 (80%), Gaps = 1/126 (0%)

Query: 1   VKERAPDAWVRQCGREGPLARQLAAPKALVLNVLSTQFRIKAQRAGLRFNPAFAGAYDFT 60
           V   AP AWVRQCGR  PLAR+L  PKAL+L++LS  FR  A RAG+RFNPAFAGAYDFT
Sbjct: 155 VGNAAPGAWVRQCGRRQPLARRLGTPKALLLDILSAGFRRHAARAGIRFNPAFAGAYDFT 214

Query: 61  RGNDFAALMQGFLDGLPEDGLVMCHPGFVDETLKSLDPLTTQRETEHAYLAGDDFPALLA 120
           + +DFAALMQ FLDG P+ GL+MCHPGFVD+TL +LDPLT QRE E+A+L+GD F  +LA
Sbjct: 215 K-SDFAALMQTFLDGSPDGGLIMCHPGFVDDTLIALDPLTDQREREYAFLSGDGFRDMLA 273

Query: 121 LNKVTL 126
            N+VTL
Sbjct: 274 ANRVTL 279


>ref|YP_001237793.1| hypothetical protein BBta_1678 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33887.1| hypothetical protein BBta_1678 [Bradyrhizobium sp. BTAi1]
          Length = 280

 Score =  175 bits (443), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 86/127 (67%), Positives = 97/127 (76%)

Query: 1   VKERAPDAWVRQCGREGPLARQLAAPKALVLNVLSTQFRIKAQRAGLRFNPAFAGAYDFT 60
           VK+ AP AWVRQ GR GPL  +L APKAL+L+ LS QFR  A+R  + FNPAFAGAYDFT
Sbjct: 154 VKDAAPSAWVRQGGRPGPLMPRLTAPKALLLDALSAQFRKHAKRVDITFNPAFAGAYDFT 213

Query: 61  RGNDFAALMQGFLDGLPEDGLVMCHPGFVDETLKSLDPLTTQRETEHAYLAGDDFPALLA 120
           + +DF ALM GFL  LPE+GLVMCHPGFVD+ L  LDPLT QRE EHAYLAG+ FP LL 
Sbjct: 214 KASDFGALMDGFLTALPENGLVMCHPGFVDDVLIELDPLTVQREHEHAYLAGEHFPDLLE 273

Query: 121 LNKVTLA 127
              VTLA
Sbjct: 274 RRGVTLA 280


>ref|YP_779805.1| hypothetical protein RPE_0869 [Rhodopseudomonas palustris BisA53]
 gb|ABJ04825.1| YdjC family protein [Rhodopseudomonas palustris BisA53]
          Length = 281

 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 84/127 (66%), Positives = 96/127 (75%)

Query: 1   VKERAPDAWVRQCGREGPLARQLAAPKALVLNVLSTQFRIKAQRAGLRFNPAFAGAYDFT 60
           VK  AP AWVRQCGR  P  R+L  PKAL+L+ LS QFR +A++AGL FNP FAGAYDF 
Sbjct: 155 VKHAAPKAWVRQCGRSLPFGRRLGEPKALLLDSLSVQFRARAKQAGLAFNPGFAGAYDFA 214

Query: 61  RGNDFAALMQGFLDGLPEDGLVMCHPGFVDETLKSLDPLTTQRETEHAYLAGDDFPALLA 120
           R  DF   MQ FLD LP+ GLVMCHPGFVD+TL  LDPLT QRE EHAYLA D F ALLA
Sbjct: 215 RQPDFGQQMQNFLDDLPDGGLVMCHPGFVDQTLIGLDPLTDQREREHAYLASDAFLALLA 274

Query: 121 LNKVTLA 127
            ++V+L+
Sbjct: 275 ASRVSLS 281