BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0094.0028.p         (120 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001207976.1| putative YdjC-like protein [Bradyrhizobium s...   140   9e-32
ref|NP_774167.1| hypothetical protein blr7527 [Bradyrhizobium ja...   137   5e-31
ref|YP_001237793.1| hypothetical protein BBta_1678 [Bradyrhizobi...   133   8e-30
ref|YP_534561.1| YdjC-like protein [Rhodopseudomonas palustris B...   126   1e-27
ref|YP_571240.1| YdjC-like protein [Rhodopseudomonas palustris B...   124   5e-27

>ref|YP_001207976.1| putative YdjC-like protein [Bradyrhizobium sp. ORS 278]
 emb|CAL79761.1| Conserved hypothetical protein; putative YdjC-like protein
          [Bradyrhizobium sp. ORS 278]
          Length = 280

 Score =  140 bits (352), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 67/87 (77%), Positives = 71/87 (81%)

Query: 7  RRIWLCADDYGLSDGVNRAIRDLIERGRLNATSVMTVTPAIGRDAAAALTASVANSPRCA 66
          RRIWLCADDYG+S GVN+AIRDLI RGRLNATSVMTV  AIGRD  A LT   A+SPRCA
Sbjct: 7  RRIWLCADDYGISPGVNKAIRDLIARGRLNATSVMTVGAAIGRDEVAELTKVAADSPRCA 66

Query: 67 IGLHVTLTAPFRPLTMHFRXSTPSMIC 93
          IGLHVTLTAPFRPLTMHFR +   M  
Sbjct: 67 IGLHVTLTAPFRPLTMHFRPAEGGMFL 93


>ref|NP_774167.1| hypothetical protein blr7527 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52792.1| blr7527 [Bradyrhizobium japonicum USDA 110]
          Length = 281

 Score =  137 bits (345), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 66/87 (75%), Positives = 69/87 (79%)

Query: 6  PRRIWLCADDYGLSDGVNRAIRDLIERGRLNATSVMTVTPAIGRDAAAALTASVANSPRC 65
          PRRIWLCADDYG+S GVNRAIRDLIERGRLNATSVM V PAI R    AL A+   SPRC
Sbjct: 7  PRRIWLCADDYGISPGVNRAIRDLIERGRLNATSVMMVGPAIARGEIEALEAAAKTSPRC 66

Query: 66 AIGLHVTLTAPFRPLTMHFRXSTPSMI 92
          AIGLHVTL+APFRPLTMHFR     M 
Sbjct: 67 AIGLHVTLSAPFRPLTMHFRPLDGDMF 93


>ref|YP_001237793.1| hypothetical protein BBta_1678 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33887.1| hypothetical protein BBta_1678 [Bradyrhizobium sp. BTAi1]
          Length = 280

 Score =  133 bits (335), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 65/86 (75%), Positives = 68/86 (79%)

Query: 7  RRIWLCADDYGLSDGVNRAIRDLIERGRLNATSVMTVTPAIGRDAAAALTASVANSPRCA 66
          RRIWLCADDYG+S GVNRAIRDLI RGRLNATSVM V  AIGRD    LT   A+S RCA
Sbjct: 7  RRIWLCADDYGISPGVNRAIRDLIGRGRLNATSVMMVGAAIGRDEVTELTKVAADSSRCA 66

Query: 67 IGLHVTLTAPFRPLTMHFRXSTPSMI 92
          IGLHVTLTAPFRPLTMHFR +   M 
Sbjct: 67 IGLHVTLTAPFRPLTMHFRPAEGGMF 92


>ref|YP_534561.1| YdjC-like protein [Rhodopseudomonas palustris BisB18]
 gb|ABD90242.1| YdjC-like protein [Rhodopseudomonas palustris BisB18]
          Length = 296

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/85 (71%), Positives = 69/85 (81%)

Query: 1  MNTDTPRRIWLCADDYGLSDGVNRAIRDLIERGRLNATSVMTVTPAIGRDAAAALTASVA 60
          M++  PRRIWLCADDYGLS GVNRAIR+LI   R+NATSVM V P+IGRD A AL A VA
Sbjct: 1  MSSAAPRRIWLCADDYGLSPGVNRAIRELIAARRINATSVMMVGPSIGRDEAEALKAVVA 60

Query: 61 NSPRCAIGLHVTLTAPFRPLTMHFR 85
          ++P CAIGLH TLTAPF PLT+ FR
Sbjct: 61 DNPDCAIGLHATLTAPFSPLTLQFR 85


>ref|YP_571240.1| YdjC-like protein [Rhodopseudomonas palustris BisB5]
 gb|ABE41339.1| YdjC-like protein [Rhodopseudomonas palustris BisB5]
          Length = 301

 Score =  124 bits (310), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 60/84 (71%), Positives = 67/84 (79%)

Query: 1  MNTDTPRRIWLCADDYGLSDGVNRAIRDLIERGRLNATSVMTVTPAIGRDAAAALTASVA 60
          M+   PRRIWLCADDYG+S GVNRAIRDLIER R+NATSVM V  AIGRD   AL  + A
Sbjct: 1  MSEAAPRRIWLCADDYGISPGVNRAIRDLIERRRINATSVMMVGSAIGRDDVRALLDATA 60

Query: 61 NSPRCAIGLHVTLTAPFRPLTMHF 84
          ++P CAIGLH TLTAPF PLTMH+
Sbjct: 61 DNPGCAIGLHATLTAPFSPLTMHY 84