BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0022.p (310 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774161.1| 4-hydroxybenzoate polyprenyltransferase [Bradyr... 488 e-136 ref|YP_001207969.1| 4-hydroxybenzoate polyprenyltransferase [Bra... 478 e-133 ref|YP_578379.1| 4-hydroxybenzoate polyprenyltransferase [Nitrob... 473 e-131 ref|YP_001237800.1| 4-hydroxybenzoate polyprenyltransferase [Bra... 472 e-131 ref|YP_571234.1| 4-hydroxybenzoate polyprenyltransferase [Rhodop... 471 e-131 >ref|NP_774161.1| 4-hydroxybenzoate polyprenyltransferase [Bradyrhizobium japonicum USDA 110] dbj|BAC52786.1| 4-hydroxybenzoate octaprenyltransferase [Bradyrhizobium japonicum USDA 110] Length = 310 Score = 488 bits (1256), Expect = e-136, Method: Compositional matrix adjust. Identities = 251/310 (80%), Positives = 275/310 (88%) Query: 1 MSDVSTRVADSTGNWVDTHAPVWSRPYLRLARYDRPIGSWLLLMPCWWSAALAAGVAHDV 60 MSD S RVADSTGNWVDT AP W+RPYLRL+R+DRPIGSWLLLMPCWWSAALAAG+AHD Sbjct: 1 MSDASARVADSTGNWVDTLAPPWARPYLRLSRFDRPIGSWLLLMPCWWSAALAAGIAHDS 60 Query: 61 RSLPLVVLLFFIGAFVMRGAGCTWNDITDRDLDAKVERTRSRPIPAGQVTVTQAAVFMVL 120 LPL ++LFFIGAFVMRGAGCTWNDITDRDLD KVERTRSRP+P+GQVT QA FMV Sbjct: 61 GRLPLTIVLFFIGAFVMRGAGCTWNDITDRDLDDKVERTRSRPLPSGQVTTKQALAFMVA 120 Query: 121 QALIGLLVLLQXNRFAVMTGIASLLIVAIYPFMKRITWWPQVVLGLAFSYGALMGFAVTL 180 QALIGL+VLLQ NRFAV+TGIASLLIVAIYPFMKRITWWPQ+VLGLAFS+GALMGFAVT Sbjct: 121 QALIGLVVLLQFNRFAVLTGIASLLIVAIYPFMKRITWWPQIVLGLAFSWGALMGFAVTF 180 Query: 181 ARIDLTAIALYAGSIAWVIAYDTIYAHQDAEDDALIGVKSTARLFGARTHRALVIFYGLA 240 RID+TA+ LY GSIAWVI YDTIYAHQDAEDDALIG+KSTARLFGA TH+ALV+FYGLA Sbjct: 181 GRIDVTALVLYGGSIAWVIGYDTIYAHQDAEDDALIGIKSTARLFGAHTHQALVLFYGLA 240 Query: 241 VLLIGVAFALAGARWPAWIGLAAFALHLAWQVRRLDISDGALCLRIFKSNRDAGFILFAS 300 V+LIGVA A RWPAW+GLAAFA HLA Q+ RL I D ALCLR+FKSNRDAG +LFA Sbjct: 241 VVLIGVALASGDVRWPAWLGLAAFAAHLASQIVRLRIDDPALCLRLFKSNRDAGLLLFAG 300 Query: 301 LVVDAVLRAA 310 L+ DAV+RAA Sbjct: 301 LLADAVMRAA 310 >ref|YP_001207969.1| 4-hydroxybenzoate polyprenyltransferase [Bradyrhizobium sp. ORS 278] emb|CAL79754.1| 4-hydroxybenzoate-octaprenyl transferase [Bradyrhizobium sp. ORS 278] Length = 310 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 245/310 (79%), Positives = 272/310 (87%) Query: 1 MSDVSTRVADSTGNWVDTHAPVWSRPYLRLARYDRPIGSWLLLMPCWWSAALAAGVAHDV 60 MSD + RVAD+TGNWVDT APVWSRPYLRLARYDRPIGSWLLLMPCWWSAALA+G++ D+ Sbjct: 1 MSDSAVRVADATGNWVDTLAPVWSRPYLRLARYDRPIGSWLLLMPCWWSAALASGISGDL 60 Query: 61 RSLPLVVLLFFIGAFVMRGAGCTWNDITDRDLDAKVERTRSRPIPAGQVTVTQAAVFMVL 120 LPL V L+F+GAF MRGAGCTWNDITDRDLDA+VERTRSRPIPAGQV V +A F+V Sbjct: 61 SMLPLWVGLYFVGAFAMRGAGCTWNDITDRDLDAQVERTRSRPIPAGQVGVKRALAFLVA 120 Query: 121 QALIGLLVLLQXNRFAVMTGIASLLIVAIYPFMKRITWWPQVVLGLAFSYGALMGFAVTL 180 QALIGL VLLQ NRFA++TGIASLLIVAIYPFMKRITWWPQ VLGLAFS+GALMGFAV Sbjct: 121 QALIGLAVLLQFNRFAILTGIASLLIVAIYPFMKRITWWPQTVLGLAFSWGALMGFAVAF 180 Query: 181 ARIDLTAIALYAGSIAWVIAYDTIYAHQDAEDDALIGVKSTARLFGARTHRALVIFYGLA 240 R+D TA+ LYAGSI WVIAYDTIYAHQDAEDDALIG+KSTARLF RTH ALV+FY LA Sbjct: 181 GRLDATALLLYAGSICWVIAYDTIYAHQDAEDDALIGIKSTARLFAERTHLALVVFYSLA 240 Query: 241 VLLIGVAFALAGARWPAWIGLAAFALHLAWQVRRLDISDGALCLRIFKSNRDAGFILFAS 300 V+LIG AFA A R AW+GLA FA HLAWQVRRLD +D ALCLR+FKSNRDAG +LFA+ Sbjct: 241 VVLIGAAFATAHVRVAAWLGLACFAAHLAWQVRRLDTADPALCLRVFKSNRDAGLLLFAA 300 Query: 301 LVVDAVLRAA 310 L++DAVLRA+ Sbjct: 301 LLIDAVLRAS 310 >ref|YP_578379.1| 4-hydroxybenzoate polyprenyltransferase [Nitrobacter hamburgensis X14] gb|ABE63919.1| 4-hydroxybenzoate octaprenyltransferase [Nitrobacter hamburgensis X14] Length = 313 Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust. Identities = 231/292 (79%), Positives = 256/292 (87%) Query: 1 MSDVSTRVADSTGNWVDTHAPVWSRPYLRLARYDRPIGSWLLLMPCWWSAALAAGVAHDV 60 MSD + RVADS GNWVD+ AP+W+RPYLRL+R DRPIGSWLLL+PCWWSAALAAGVA+D+ Sbjct: 1 MSDAAARVADSAGNWVDSRAPLWARPYLRLSRLDRPIGSWLLLLPCWWSAALAAGVANDL 60 Query: 61 RSLPLVVLLFFIGAFVMRGAGCTWNDITDRDLDAKVERTRSRPIPAGQVTVTQAAVFMVL 120 LPL ++LFFIGAF MRGAGCTWNDITDRDLDA+VERTRSRPIPAGQ TV QA VF+V Sbjct: 61 SRLPLTIVLFFIGAFAMRGAGCTWNDITDRDLDARVERTRSRPIPAGQATVAQAFVFLVA 120 Query: 121 QALIGLLVLLQXNRFAVMTGIASLLIVAIYPFMKRITWWPQVVLGLAFSYGALMGFAVTL 180 QAL+GL+VLLQ NRFA+ TGIASL++VA+YPFMKRIT WPQVVLGLAFS+GALMGFAV L Sbjct: 121 QALVGLVVLLQFNRFAIATGIASLIVVAVYPFMKRITNWPQVVLGLAFSWGALMGFAVVL 180 Query: 181 ARIDLTAIALYAGSIAWVIAYDTIYAHQDAEDDALIGVKSTARLFGARTHRALVIFYGLA 240 R+D A+ALYAGSIAWVI YDTIYAHQD EDDALIG+KSTA LFG RT AL IFYGLA Sbjct: 181 GRVDAAALALYAGSIAWVIGYDTIYAHQDTEDDALIGIKSTALLFGERTRSALAIFYGLA 240 Query: 241 VLLIGVAFALAGARWPAWIGLAAFALHLAWQVRRLDISDGALCLRIFKSNRD 292 V+LIGVA LAGARWPAWIGLAAF HLAWQV R+ I D LCLR+FKSNRD Sbjct: 241 VVLIGVALHLAGARWPAWIGLAAFTTHLAWQVARIQIGDSRLCLRLFKSNRD 292 >ref|YP_001237800.1| 4-hydroxybenzoate polyprenyltransferase [Bradyrhizobium sp. BTAi1] gb|ABQ33894.1| 4-hydroxybenzoate octaprenyltransferase [Bradyrhizobium sp. BTAi1] Length = 310 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 242/308 (78%), Positives = 268/308 (87%) Query: 1 MSDVSTRVADSTGNWVDTHAPVWSRPYLRLARYDRPIGSWLLLMPCWWSAALAAGVAHDV 60 MSD + RVAD+TGNWVDT APVWSRPYLRLARYDRPIGSWLLLMPCWWSAALAAG++ + Sbjct: 1 MSDTAVRVADATGNWVDTLAPVWSRPYLRLARYDRPIGSWLLLMPCWWSAALAAGMSGQL 60 Query: 61 RSLPLVVLLFFIGAFVMRGAGCTWNDITDRDLDAKVERTRSRPIPAGQVTVTQAAVFMVL 120 LP + L+F+GAF MRGAGCTWNDITDRDLDAKVERTRSRPIPAGQV V QA F+V Sbjct: 61 TMLPAWIALYFVGAFAMRGAGCTWNDITDRDLDAKVERTRSRPIPAGQVGVKQALAFLVA 120 Query: 121 QALIGLLVLLQXNRFAVMTGIASLLIVAIYPFMKRITWWPQVVLGLAFSYGALMGFAVTL 180 QALIGL+VLLQ NRFA++TGIASL+IVAIYPFMKRITWWPQ+VLGLAFS+GALMGFAV Sbjct: 121 QALIGLMVLLQFNRFAILTGIASLVIVAIYPFMKRITWWPQMVLGLAFSWGALMGFAVAF 180 Query: 181 ARIDLTAIALYAGSIAWVIAYDTIYAHQDAEDDALIGVKSTARLFGARTHRALVIFYGLA 240 R+D TA+ LYAGSIAWVIAYDTIYAHQDAEDDALIG+KSTARLF RTH AL++FYGLA Sbjct: 181 GRLDATALLLYAGSIAWVIAYDTIYAHQDAEDDALIGIKSTARLFADRTHLALILFYGLA 240 Query: 241 VLLIGVAFALAGARWPAWIGLAAFALHLAWQVRRLDISDGALCLRIFKSNRDAGFILFAS 300 V+LIG A A A AWIGLA FA HL WQV RLD +D ALCLR+FKSNRDAG +LFA+ Sbjct: 241 VVLIGAALVTAHAGVAAWIGLAGFAAHLGWQVHRLDTADPALCLRVFKSNRDAGLLLFAA 300 Query: 301 LVVDAVLR 308 L+VDAVLR Sbjct: 301 LLVDAVLR 308 >ref|YP_571234.1| 4-hydroxybenzoate polyprenyltransferase [Rhodopseudomonas palustris BisB5] gb|ABE41333.1| 4-hydroxybenzoate octaprenyltransferase [Rhodopseudomonas palustris BisB5] Length = 316 Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust. Identities = 230/308 (74%), Positives = 259/308 (84%) Query: 1 MSDVSTRVADSTGNWVDTHAPVWSRPYLRLARYDRPIGSWLLLMPCWWSAALAAGVAHDV 60 +S + VADSTGNWVD+HAP WSRPYLRLAR+DRPIGSWLLL+PCWWSAALAAG+A D+ Sbjct: 6 ISGATAPVADSTGNWVDSHAPEWSRPYLRLARFDRPIGSWLLLLPCWWSAALAAGIAKDL 65 Query: 61 RSLPLVVLLFFIGAFVMRGAGCTWNDITDRDLDAKVERTRSRPIPAGQVTVTQAAVFMVL 120 L L LFF+GAFVMRGAGCTWNDITDR+LD KVERTRSRPIP+GQVT QAA FMVL Sbjct: 66 SHLALFCALFFVGAFVMRGAGCTWNDITDRNLDGKVERTRSRPIPSGQVTARQAAAFMVL 125 Query: 121 QALIGLLVLLQXNRFAVMTGIASLLIVAIYPFMKRITWWPQVVLGLAFSYGALMGFAVTL 180 +LIGL VLLQ N FA+ TGI+SL+IVA YPFMKRIT+WPQ+VLGLAFS+GALMGFAVT Sbjct: 126 LSLIGLAVLLQFNAFAIATGISSLIIVAAYPFMKRITYWPQIVLGLAFSWGALMGFAVTF 185 Query: 181 ARIDLTAIALYAGSIAWVIAYDTIYAHQDAEDDALIGVKSTARLFGARTHRALVIFYGLA 240 AR+DL A LYAGSI WV+ YDTIYAHQDAEDD +IG+KSTA LFGA+T AL+I YGLA Sbjct: 186 ARLDLVAFVLYAGSIVWVVGYDTIYAHQDAEDDLMIGIKSTALLFGAKTQTALLILYGLA 245 Query: 241 VLLIGVAFALAGARWPAWIGLAAFALHLAWQVRRLDISDGALCLRIFKSNRDAGFILFAS 300 V LIG A LAG+ W WIGLAAFA+HL WQ+ RLDI D LCL++FKSNRDAG +LF Sbjct: 246 VTLIGTALMLAGSGWLGWIGLAAFAIHLGWQIVRLDIRDSRLCLKLFKSNRDAGLLLFIG 305 Query: 301 LVVDAVLR 308 LV DAVLR Sbjct: 306 LVCDAVLR 313