BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0020.p (258 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001237802.1| putative Zn-dependent protease, pmbA-like pr... 459 e-127 ref|YP_001207967.1| putative Zn-dependent protease, pmbA-like pr... 457 e-126 ref|NP_774159.1| PmbA/TldD related protein [Bradyrhizobium japon... 456 e-126 ref|ZP_01048144.1| peptidase U62, modulator of DNA gyrase [Nitro... 449 e-124 ref|YP_534549.1| peptidase U62, modulator of DNA gyrase [Rhodops... 440 e-121 >ref|YP_001237802.1| putative Zn-dependent protease, pmbA-like protein [Bradyrhizobium sp. BTAi1] gb|ABQ33896.1| microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 [Bradyrhizobium sp. BTAi1] Length = 464 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 222/258 (86%), Positives = 239/258 (92%) Query: 1 MERDYDFTSAPHASDLDSPAAVGRKAGERAVARANPRKVETCKVPVVFDPRVAGSIVGHL 60 MERDYD+T+APH +DL +PAAVGR AGERAVARANPRKV TC+VPVVFDPRV+GS+VGHL Sbjct: 207 MERDYDYTAAPHGADLLAPAAVGRSAGERAVARANPRKVATCQVPVVFDPRVSGSLVGHL 266 Query: 61 VGAINGASIARKTSFLKDKLGEQLFSKDIRIIDDPLRVRGLRSQTFDAEGVRVKKTALID 120 VGAINGASIARKTSFLKDKLG QLF+KDIRIIDDPLR RGLRSQ FDAEGV+VKKTAL+D Sbjct: 267 VGAINGASIARKTSFLKDKLGAQLFAKDIRIIDDPLRPRGLRSQPFDAEGVQVKKTALVD 326 Query: 121 AGVLTTWVLDSATARELGLVTTGHAHRGVSSSPSPGTYNLHLEPGAVTPRELISDIKQGF 180 GVLTTW+LDSATARELGL TTGHAHRGVSSSPSPG +NLHLE G VT +ELISDIKQGF Sbjct: 327 DGVLTTWLLDSATARELGLATTGHAHRGVSSSPSPGPFNLHLEAGVVTAKELISDIKQGF 386 Query: 181 YVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSEVTIAGHLLPMFKSLVAADDLEFR 240 YVTDLIGSGVNGVTGDYSRGASGFWIENGEITY VSEVTIAGHL +FKS+ A DLEFR Sbjct: 387 YVTDLIGSGVNGVTGDYSRGASGFWIENGEITYAVSEVTIAGHLFEIFKSMTPASDLEFR 446 Query: 241 YGVNSPTLRIEGLTLGGR 258 YGVN+PT+RIEGLTLGGR Sbjct: 447 YGVNAPTVRIEGLTLGGR 464 >ref|YP_001207967.1| putative Zn-dependent protease, pmbA-like protein [Bradyrhizobium sp. ORS 278] emb|CAL79752.1| putative Zn-dependent protease, pmbA-like protein [Bradyrhizobium sp. ORS 278] Length = 464 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 221/258 (85%), Positives = 239/258 (92%) Query: 1 MERDYDFTSAPHASDLDSPAAVGRKAGERAVARANPRKVETCKVPVVFDPRVAGSIVGHL 60 MERDYD+T+APH +DL +PAAVGR AGERAVARANPRKV TC+VPVVFDPRV+GS+VGHL Sbjct: 207 MERDYDYTAAPHGADLLAPAAVGRSAGERAVARANPRKVATCQVPVVFDPRVSGSLVGHL 266 Query: 61 VGAINGASIARKTSFLKDKLGEQLFSKDIRIIDDPLRVRGLRSQTFDAEGVRVKKTALID 120 VGAINGASIARKTSFLKDKLG QLF+K IRIIDDPLR RGLRSQ FDAEGV+VKKTAL+D Sbjct: 267 VGAINGASIARKTSFLKDKLGAQLFAKGIRIIDDPLRPRGLRSQPFDAEGVKVKKTALVD 326 Query: 121 AGVLTTWVLDSATARELGLVTTGHAHRGVSSSPSPGTYNLHLEPGAVTPRELISDIKQGF 180 GVLTTW+LDSATARELGLVTTGHAHRGVSSSPSPG +NLHLE G VTP+ELISDIKQGF Sbjct: 327 DGVLTTWLLDSATARELGLVTTGHAHRGVSSSPSPGPFNLHLEAGVVTPKELISDIKQGF 386 Query: 181 YVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSEVTIAGHLLPMFKSLVAADDLEFR 240 YVTDLIGSGVNGVTGDYSRGASGFWIENGEI Y VSEVTIAGHL +FKS+ A +LEFR Sbjct: 387 YVTDLIGSGVNGVTGDYSRGASGFWIENGEIGYAVSEVTIAGHLFEIFKSMTPASNLEFR 446 Query: 241 YGVNSPTLRIEGLTLGGR 258 YGVN+PT+RIEGLTLGGR Sbjct: 447 YGVNAPTVRIEGLTLGGR 464 >ref|NP_774159.1| PmbA/TldD related protein [Bradyrhizobium japonicum USDA 110] dbj|BAC52784.1| PmbA/TldD related protein [Bradyrhizobium japonicum USDA 110] Length = 477 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 221/258 (85%), Positives = 236/258 (91%) Query: 1 MERDYDFTSAPHASDLDSPAAVGRKAGERAVARANPRKVETCKVPVVFDPRVAGSIVGHL 60 MERDYDFTSAPH +DL SP VGR AGER VAR NPRKVETCKVPVVFDPRVAGS+VGH+ Sbjct: 220 MERDYDFTSAPHGADLLSPEIVGRSAGERTVARYNPRKVETCKVPVVFDPRVAGSLVGHV 279 Query: 61 VGAINGASIARKTSFLKDKLGEQLFSKDIRIIDDPLRVRGLRSQTFDAEGVRVKKTALID 120 VGAINGASIARKTSFLKDKLG+QLF+K+IRIIDDPLR RGLRSQTFDAEGV VKK ALID Sbjct: 280 VGAINGASIARKTSFLKDKLGQQLFAKNIRIIDDPLRKRGLRSQTFDAEGVAVKKIALID 339 Query: 121 AGVLTTWVLDSATARELGLVTTGHAHRGVSSSPSPGTYNLHLEPGAVTPRELISDIKQGF 180 GVLTTW+LD ATARELGL TTGHAHRGVSSSPSPG YNLHLE G TP ELI+DIKQGF Sbjct: 340 EGVLTTWLLDCATARELGLATTGHAHRGVSSSPSPGPYNLHLEAGTPTPAELIADIKQGF 399 Query: 181 YVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSEVTIAGHLLPMFKSLVAADDLEFR 240 YVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSEVTIAGHL +FKS+ A++LEFR Sbjct: 400 YVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSEVTIAGHLFEIFKSMQPANNLEFR 459 Query: 241 YGVNSPTLRIEGLTLGGR 258 YG+N+PT+RIEGLTLGGR Sbjct: 460 YGINAPTVRIEGLTLGGR 477 >ref|ZP_01048144.1| peptidase U62, modulator of DNA gyrase [Nitrobacter sp. Nb-311A] gb|EAQ33919.1| peptidase U62, modulator of DNA gyrase [Nitrobacter sp. Nb-311A] Length = 462 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 213/258 (82%), Positives = 237/258 (91%) Query: 1 MERDYDFTSAPHASDLDSPAAVGRKAGERAVARANPRKVETCKVPVVFDPRVAGSIVGHL 60 MERDYDF+SA H SDL SPA++GR AGERAVARANPRKV TCKVPVV+DPRVAGS+VGH+ Sbjct: 205 MERDYDFSSALHGSDLMSPASIGRSAGERAVARANPRKVATCKVPVVYDPRVAGSLVGHV 264 Query: 61 VGAINGASIARKTSFLKDKLGEQLFSKDIRIIDDPLRVRGLRSQTFDAEGVRVKKTALID 120 AINGA+IARKTSFLKD+LG+QLF+K IRIIDDPLRVRGLRSQ+FDAEGV KK A+ID Sbjct: 265 ASAINGAAIARKTSFLKDRLGQQLFAKGIRIIDDPLRVRGLRSQSFDAEGVATKKLAVID 324 Query: 121 AGVLTTWVLDSATARELGLVTTGHAHRGVSSSPSPGTYNLHLEPGAVTPRELISDIKQGF 180 GVLT+W+LDSATARELGL TTGHAHRGVSSSPSPG YNLHLE G +TPRELI+D++QGF Sbjct: 325 DGVLTSWLLDSATARELGLTTTGHAHRGVSSSPSPGPYNLHLEAGRITPRELIADVEQGF 384 Query: 181 YVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSEVTIAGHLLPMFKSLVAADDLEFR 240 YVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSE+TIAGHL+ MFKSL A+DL FR Sbjct: 385 YVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSEITIAGHLIEMFKSLSPANDLTFR 444 Query: 241 YGVNSPTLRIEGLTLGGR 258 YG N+PT+RIEGLT+GGR Sbjct: 445 YGTNAPTVRIEGLTVGGR 462 >ref|YP_534549.1| peptidase U62, modulator of DNA gyrase [Rhodopseudomonas palustris BisB18] gb|ABD90230.1| microcin-processing peptidase 1. Unknown type peptidase. MEROPS family U62 [Rhodopseudomonas palustris BisB18] Length = 465 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 209/258 (81%), Positives = 233/258 (90%) Query: 1 MERDYDFTSAPHASDLDSPAAVGRKAGERAVARANPRKVETCKVPVVFDPRVAGSIVGHL 60 MERDYD++SAPHA+DLDSP VGR AGERAVARANPRKV TCKVPV+FDPRVAGS++ HL Sbjct: 208 MERDYDYSSAPHAADLDSPDKVGRTAGERAVARANPRKVATCKVPVLFDPRVAGSLISHL 267 Query: 61 VGAINGASIARKTSFLKDKLGEQLFSKDIRIIDDPLRVRGLRSQTFDAEGVRVKKTALID 120 + A NGASIARKTSFLKD+LGE+LF DIRIIDDPLR RGLRSQTFDAEGV V++ A+++ Sbjct: 268 INAANGASIARKTSFLKDRLGERLFDNDIRIIDDPLRKRGLRSQTFDAEGVAVERRAIVE 327 Query: 121 AGVLTTWVLDSATARELGLVTTGHAHRGVSSSPSPGTYNLHLEPGAVTPRELISDIKQGF 180 GVLTTW+LDSATARELGL TTGHAHRGVSSSPSPG YNLHLE G VTP EL+SDIK+GF Sbjct: 328 DGVLTTWLLDSATARELGLSTTGHAHRGVSSSPSPGPYNLHLEGGTVTPAELMSDIKEGF 387 Query: 181 YVTDLIGSGVNGVTGDYSRGASGFWIENGEITYPVSEVTIAGHLLPMFKSLVAADDLEFR 240 YVTDLIGSGVNGVTGDYSRGA+GFWIENGE TY VSEVTIAGHL+ M+K L AA+DLEFR Sbjct: 388 YVTDLIGSGVNGVTGDYSRGAAGFWIENGECTYAVSEVTIAGHLIEMYKHLSAANDLEFR 447 Query: 241 YGVNSPTLRIEGLTLGGR 258 +G N+PTLRIEGLT+ GR Sbjct: 448 HGTNAPTLRIEGLTIAGR 465