BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0094.0014.p         (75 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001207961.1| hypothetical protein BRADO6094 [Bradyrhizobi...   139   1e-31
ref|NP_774150.1| hypothetical protein bsr7510 [Bradyrhizobium ja...   139   2e-31
ref|YP_001237808.1| hypothetical protein BBta_1693 [Bradyrhizobi...   138   4e-31
ref|YP_578371.1| hypothetical protein Nham_3176 [Nitrobacter ham...   134   4e-30
ref|YP_485476.1| hypothetical protein RPB_1857 [Rhodopseudomonas...   132   2e-29

>ref|YP_001207961.1| hypothetical protein BRADO6094 [Bradyrhizobium sp. ORS 278]
 emb|CAL79746.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 80

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 63/72 (87%), Positives = 68/72 (94%)

Query: 1  VLNKFGPSGHGEAQVQYLDGDFRVISPGTFVRCAITDVRIPLDELKYWSVDLQEAYATPT 60
          VLNKFGPSG GEAQVQYLDGDFRVISPG++VRCA+TD RIPLDELKYWSVDLQEAYA P+
Sbjct: 6  VLNKFGPSGQGEAQVQYLDGDFRVISPGSYVRCAVTDARIPLDELKYWSVDLQEAYALPS 65

Query: 61 AVLQRHHPGVLK 72
          AVLQRH+PG LK
Sbjct: 66 AVLQRHYPGALK 77


>ref|NP_774150.1| hypothetical protein bsr7510 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52775.1| bsr7510 [Bradyrhizobium japonicum USDA 110]
          Length = 75

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/74 (87%), Positives = 68/74 (91%)

Query: 1  VLNKFGPSGHGEAQVQYLDGDFRVISPGTFVRCAITDVRIPLDELKYWSVDLQEAYATPT 60
          +LNKFG SG+GEAQVQYLDGDFRVISPGT+VRCAITD RIPLDELKYWSVDLQEAYATP 
Sbjct: 1  MLNKFGSSGNGEAQVQYLDGDFRVISPGTYVRCAITDTRIPLDELKYWSVDLQEAYATPA 60

Query: 61 AVLQRHHPGVLKPQ 74
          AVLQRH PG  KPQ
Sbjct: 61 AVLQRHFPGAPKPQ 74


>ref|YP_001237808.1| hypothetical protein BBta_1693 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33902.1| hypothetical protein BBta_1693 [Bradyrhizobium sp. BTAi1]
          Length = 75

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 62/72 (86%), Positives = 68/72 (94%)

Query: 1  VLNKFGPSGHGEAQVQYLDGDFRVISPGTFVRCAITDVRIPLDELKYWSVDLQEAYATPT 60
          +LNKFGPSG GEAQVQYLDGDFRVISPG++VRCA+TD RIPLDELKYWSVDLQEAYA P+
Sbjct: 1  MLNKFGPSGQGEAQVQYLDGDFRVISPGSYVRCAVTDARIPLDELKYWSVDLQEAYALPS 60

Query: 61 AVLQRHHPGVLK 72
          AVLQRH+PG LK
Sbjct: 61 AVLQRHYPGALK 72


>ref|YP_578371.1| hypothetical protein Nham_3176 [Nitrobacter hamburgensis X14]
 gb|ABE63911.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 75

 Score =  134 bits (338), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/72 (84%), Positives = 67/72 (93%)

Query: 1  VLNKFGPSGHGEAQVQYLDGDFRVISPGTFVRCAITDVRIPLDELKYWSVDLQEAYATPT 60
          +LNKFG SG GEA+VQYLDGDFRVISPGT+VRCA+TD RIPLDELKYWSVDLQEAYA P+
Sbjct: 1  MLNKFGQSGQGEARVQYLDGDFRVISPGTYVRCAVTDARIPLDELKYWSVDLQEAYALPS 60

Query: 61 AVLQRHHPGVLK 72
          AVLQRH+PG LK
Sbjct: 61 AVLQRHYPGALK 72


>ref|YP_485476.1| hypothetical protein RPB_1857 [Rhodopseudomonas palustris HaA2]
 gb|ABD06565.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 75

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/73 (83%), Positives = 66/73 (90%)

Query: 1  VLNKFGPSGHGEAQVQYLDGDFRVISPGTFVRCAITDVRIPLDELKYWSVDLQEAYATPT 60
          +LNKFGPSG GEAQVQYLDGDFRVISPGT+VRCA+T V+IPLDELKYWSVDL+EAYATP 
Sbjct: 1  MLNKFGPSGSGEAQVQYLDGDFRVISPGTYVRCAVTGVQIPLDELKYWSVDLKEAYATPI 60

Query: 61 AVLQRHHPGVLKP 73
          AVLQRH P   KP
Sbjct: 61 AVLQRHFPAAAKP 73