BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0001.p (522 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774131.1| 2-keto-gluconate dehydrogenase [Bradyrhizobium ... 979 0.0 ref|YP_001237820.1| oxidoreductase [Bradyrhizobium sp. BTAi1] >g... 941 0.0 ref|YP_001207944.1| oxidoreductase [Bradyrhizobium sp. ORS 278] ... 939 0.0 ref|YP_001772011.1| glucose-methanol-choline oxidoreductase [Met... 922 0.0 ref|YP_001523879.1| 2-keto-gluconate dehydrogenase [Azorhizobium... 905 0.0 >ref|NP_774131.1| 2-keto-gluconate dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC52756.1| blr7491 [Bradyrhizobium japonicum USDA 110] Length = 522 Score = 979 bits (2532), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/522 (89%), Positives = 500/522 (95%) Query: 1 MAKFDLNDSGVVVIVGSGAGGGTLGNELAQKGVKVVILEAGPRIENQDFINDEWDSFTQL 60 M KFDLNDS VVVIVGSGAGGGTLGNELAQKGVKVVILEAGPRIENQDFINDEW+SF+QL Sbjct: 1 MTKFDLNDSSVVVIVGSGAGGGTLGNELAQKGVKVVILEAGPRIENQDFINDEWESFSQL 60 Query: 61 AWSDARSTSGSWRVHQDFPGLPAWIVKAVGGSTTHWAGASLRFDEHEFKIKSAYGGIPGA 120 AW+DAR+TSG+WRV +DF GLPAWIVKAVGGST HWAGASLRFDEHEF++KSAYG IPGA Sbjct: 61 AWTDARTTSGTWRVAKDFSGLPAWIVKAVGGSTVHWAGASLRFDEHEFRVKSAYGNIPGA 120 Query: 121 NLIDWPITLAEMEPWYAKAEDKMGVTRTNGIPGLPGNNNFKVMEAGARKLGYKEVHTGRM 180 NL+DWP+TLAEMEPWYAKAE+KMGVTRTNGIPGLPGNNNFKV+EAGA+KLGYK VHTG M Sbjct: 121 NLLDWPVTLAEMEPWYAKAENKMGVTRTNGIPGLPGNNNFKVLEAGAKKLGYKTVHTGNM 180 Query: 181 AINSEPRDGRGSCQQIGFCFQGCKSGAKWSTLYTEIPKGEATGNLEVRPGSMVIKIEHDP 240 AINS+PRDGRGSCQQIGFCFQGCKSGAKWSTLYTEIPKGEATGNLEVRP SM +KIEHD Sbjct: 181 AINSQPRDGRGSCQQIGFCFQGCKSGAKWSTLYTEIPKGEATGNLEVRPSSMAVKIEHDA 240 Query: 241 SGKVTGVVYADSTGATQRQKARVVAVAGNSIESPRLLLNSASSMFPDGLANSSGQVGRNY 300 GKVTGVVYAD GA QRQKAR+VAVAGNSIESPRLLLNSAS+MFPDGLANSSGQVGRNY Sbjct: 241 GGKVTGVVYADEAGAMQRQKARIVAVAGNSIESPRLLLNSASTMFPDGLANSSGQVGRNY 300 Query: 301 MRHMTGSVYASFEKSVHMYRGTTMAGIIRDEAKNDPKRGFVGGYEMETLSLGLPFMAAFL 360 MRHMTGSVYA FEKSVHMYRGTTMAGIIRDEA N+PKRGFVGGYEMETLS+GLPFMAAFL Sbjct: 301 MRHMTGSVYAVFEKSVHMYRGTTMAGIIRDEAANNPKRGFVGGYEMETLSIGLPFMAAFL 360 Query: 361 NPGAWGRSFTSAIEGYPRMAGMWLVGEDMPQETNRVTLDPKIKDKFGMPVASVHFDDHPN 420 NPGAWGR FTSA++GYPRMAGMWLVGEDMPQETNR+TLDP +KDKFG PVASVHFDDHPN Sbjct: 361 NPGAWGRPFTSALDGYPRMAGMWLVGEDMPQETNRITLDPVVKDKFGQPVASVHFDDHPN 420 Query: 421 DVAMRDHAYKQGSAVYEAVGATVTYPTPPYPSTHNMGTNRMSEKPRDGVVNKFGQTHDIK 480 D+AMR HAYKQG+AVY+AVGATVTYPTPPYPSTHN+GTNRMSEKPRDGVVNKFGQ+HD+K Sbjct: 421 DIAMRAHAYKQGAAVYDAVGATVTYPTPPYPSTHNLGTNRMSEKPRDGVVNKFGQSHDVK 480 Query: 481 NLFVSDGSQFTSGAACNPTLTIVSLAIRQADHIASAMQRKEI 522 NLFVSDGSQFTSGAACNPTLTIV+LAIRQAD+IA AMQ+KEI Sbjct: 481 NLFVSDGSQFTSGAACNPTLTIVALAIRQADYIAGAMQKKEI 522 >ref|YP_001237820.1| oxidoreductase [Bradyrhizobium sp. BTAi1] gb|ABQ33914.1| putative oxidoreductase, GMC family [Bradyrhizobium sp. BTAi1] Length = 522 Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/522 (86%), Positives = 487/522 (93%) Query: 1 MAKFDLNDSGVVVIVGSGAGGGTLGNELAQKGVKVVILEAGPRIENQDFINDEWDSFTQL 60 MAKFD NDS VVVI+GSGAGGGTLGNELAQKG+KVVILEAG R E DFINDEW+SFTQL Sbjct: 1 MAKFDQNDSSVVVIIGSGAGGGTLGNELAQKGIKVVILEAGNRYEIPDFINDEWESFTQL 60 Query: 61 AWSDARSTSGSWRVHQDFPGLPAWIVKAVGGSTTHWAGASLRFDEHEFKIKSAYGGIPGA 120 AW+D R+TSG+WRV +DF LPAWIVKAVGGST HWAGASLRF+EHEFK ++ YGG+PGA Sbjct: 61 AWTDMRTTSGTWRVAKDFANLPAWIVKAVGGSTVHWAGASLRFEEHEFKARTTYGGVPGA 120 Query: 121 NLIDWPITLAEMEPWYAKAEDKMGVTRTNGIPGLPGNNNFKVMEAGARKLGYKEVHTGRM 180 +L+DWP+TLAEMEPWYAKAE KMGVTRTN IPGLPGNNNFKV+EAGARKLGYK VHTG M Sbjct: 121 SLMDWPVTLAEMEPWYAKAEFKMGVTRTNDIPGLPGNNNFKVLEAGARKLGYKTVHTGNM 180 Query: 181 AINSEPRDGRGSCQQIGFCFQGCKSGAKWSTLYTEIPKGEATGNLEVRPGSMVIKIEHDP 240 AINS+PRDGRG+CQQIGFCFQGCKSGAKWSTLYTEIPKGEATGNLEVR GSM IKIEHD Sbjct: 181 AINSQPRDGRGACQQIGFCFQGCKSGAKWSTLYTEIPKGEATGNLEVRSGSMAIKIEHDA 240 Query: 241 SGKVTGVVYADSTGATQRQKARVVAVAGNSIESPRLLLNSASSMFPDGLANSSGQVGRNY 300 SGKVTGVVYADS G Q QKAR+VAVAGNSIESPRLLLNSAS++FPDGLANSSGQVGRNY Sbjct: 241 SGKVTGVVYADSQGKMQLQKARIVAVAGNSIESPRLLLNSASNLFPDGLANSSGQVGRNY 300 Query: 301 MRHMTGSVYASFEKSVHMYRGTTMAGIIRDEAKNDPKRGFVGGYEMETLSLGLPFMAAFL 360 MRHMTGSVYA+FE VHMYRGTTMAGI+RDEA +PKRGFVGGYEMETLSLGLPFMAAFL Sbjct: 301 MRHMTGSVYATFENPVHMYRGTTMAGIVRDEAAFNPKRGFVGGYEMETLSLGLPFMAAFL 360 Query: 361 NPGAWGRSFTSAIEGYPRMAGMWLVGEDMPQETNRVTLDPKIKDKFGMPVASVHFDDHPN 420 NPGAWGRSFT+A+E YPRMAGMWLVGEDMPQETNR+TLDP KDKFGMPVASVHFDDHPN Sbjct: 361 NPGAWGRSFTAAMETYPRMAGMWLVGEDMPQETNRITLDPVAKDKFGMPVASVHFDDHPN 420 Query: 421 DVAMRDHAYKQGSAVYEAVGATVTYPTPPYPSTHNMGTNRMSEKPRDGVVNKFGQTHDIK 480 DVAMR HAYKQGSA+YEAVGATVTYPT PYPSTHN+GTNRMSEK +DGVVNKFGQTHDIK Sbjct: 421 DVAMRAHAYKQGSAIYEAVGATVTYPTTPYPSTHNLGTNRMSEKAKDGVVNKFGQTHDIK 480 Query: 481 NLFVSDGSQFTSGAACNPTLTIVSLAIRQADHIASAMQRKEI 522 NLFVSDGSQFT+GAACNPTLTIV+LAIRQAD+IA AMQ+KEI Sbjct: 481 NLFVSDGSQFTTGAACNPTLTIVALAIRQADYIAGAMQKKEI 522 >ref|YP_001207944.1| oxidoreductase [Bradyrhizobium sp. ORS 278] emb|CAL79729.1| putative oxydoreductase, GMC family [Bradyrhizobium sp. ORS 278] Length = 522 Score = 939 bits (2427), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/522 (86%), Positives = 485/522 (92%) Query: 1 MAKFDLNDSGVVVIVGSGAGGGTLGNELAQKGVKVVILEAGPRIENQDFINDEWDSFTQL 60 MAKFDLNDS VVVIVGSGAGGGTLGNELAQKG+KVVILEAG R E DFINDEW+SFTQL Sbjct: 1 MAKFDLNDSSVVVIVGSGAGGGTLGNELAQKGIKVVILEAGGRYEIPDFINDEWESFTQL 60 Query: 61 AWSDARSTSGSWRVHQDFPGLPAWIVKAVGGSTTHWAGASLRFDEHEFKIKSAYGGIPGA 120 AW+D R+TSGSWRV +DF LPAWIVKAVGGST HWAGASLRF+EHEFK ++ YGG+PG Sbjct: 61 AWTDMRTTSGSWRVAKDFANLPAWIVKAVGGSTVHWAGASLRFEEHEFKARTTYGGVPGT 120 Query: 121 NLIDWPITLAEMEPWYAKAEDKMGVTRTNGIPGLPGNNNFKVMEAGARKLGYKEVHTGRM 180 L+DWP+TLAEM PWYAKAE KMGVTRTN IPGLPGNNNFKV+EAGA++LGYK VHTG M Sbjct: 121 TLLDWPVTLAEMAPWYAKAEFKMGVTRTNDIPGLPGNNNFKVLEAGAKRLGYKTVHTGNM 180 Query: 181 AINSEPRDGRGSCQQIGFCFQGCKSGAKWSTLYTEIPKGEATGNLEVRPGSMVIKIEHDP 240 AINS+PRDGRGSCQQIGFCFQGCKSGAKWSTLYTEIPKGEATGNLEVR G M IKIEHD Sbjct: 181 AINSQPRDGRGSCQQIGFCFQGCKSGAKWSTLYTEIPKGEATGNLEVRSGCMAIKIEHDA 240 Query: 241 SGKVTGVVYADSTGATQRQKARVVAVAGNSIESPRLLLNSASSMFPDGLANSSGQVGRNY 300 SGKVTGVVYAD+ G Q+QKAR+VAVAGNSIESPRLLLNSASS+FPDGLANSSGQVGRNY Sbjct: 241 SGKVTGVVYADADGKMQQQKARIVAVAGNSIESPRLLLNSASSLFPDGLANSSGQVGRNY 300 Query: 301 MRHMTGSVYASFEKSVHMYRGTTMAGIIRDEAKNDPKRGFVGGYEMETLSLGLPFMAAFL 360 MRHMTGSVYA+FE VHMYRGTTMAGI+RDEA +PKRGFVGGYEMETLSLGLPFMAAFL Sbjct: 301 MRHMTGSVYATFENPVHMYRGTTMAGIVRDEAAFNPKRGFVGGYEMETLSLGLPFMAAFL 360 Query: 361 NPGAWGRSFTSAIEGYPRMAGMWLVGEDMPQETNRVTLDPKIKDKFGMPVASVHFDDHPN 420 NPGAWGRSFT+A+E YPRMAGMWLVGEDMPQETNR+TLDP KDKFGMPVASVHFDDHPN Sbjct: 361 NPGAWGRSFTAAMETYPRMAGMWLVGEDMPQETNRITLDPVAKDKFGMPVASVHFDDHPN 420 Query: 421 DVAMRDHAYKQGSAVYEAVGATVTYPTPPYPSTHNMGTNRMSEKPRDGVVNKFGQTHDIK 480 D+AMR HAYKQGSA+YEAVGATVTYPT PYPSTHN+GTNRMSEK RDGVVNKFGQTHD+K Sbjct: 421 DLAMRAHAYKQGSAIYEAVGATVTYPTTPYPSTHNLGTNRMSEKARDGVVNKFGQTHDVK 480 Query: 481 NLFVSDGSQFTSGAACNPTLTIVSLAIRQADHIASAMQRKEI 522 NLFVSDGSQFT+GAACNPTLTIV+LAIRQAD+IA AMQ+KEI Sbjct: 481 NLFVSDGSQFTTGAACNPTLTIVALAIRQADYIAGAMQKKEI 522 >ref|YP_001772011.1| glucose-methanol-choline oxidoreductase [Methylobacterium sp. 4-46] gb|ACA19577.1| glucose-methanol-choline oxidoreductase [Methylobacterium sp. 4-46] Length = 522 Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/522 (84%), Positives = 478/522 (91%) Query: 1 MAKFDLNDSGVVVIVGSGAGGGTLGNELAQKGVKVVILEAGPRIENQDFINDEWDSFTQL 60 MA FDLND G+VVIVGSGAGGGTLG ELA KG++ VILEAG R +DF+NDEW SF QL Sbjct: 1 MAGFDLNDDGLVVIVGSGAGGGTLGTELALKGIRTVILEAGARHNMEDFVNDEWASFAQL 60 Query: 61 AWSDARSTSGSWRVHQDFPGLPAWIVKAVGGSTTHWAGASLRFDEHEFKIKSAYGGIPGA 120 AW+D R+TSGSWRV +DFP LPAWIVKAVGGST HWAGASLRF+EHEF+I+ YG IPGA Sbjct: 61 AWTDMRTTSGSWRVARDFPNLPAWIVKAVGGSTVHWAGASLRFEEHEFRIRDHYGAIPGA 120 Query: 121 NLIDWPITLAEMEPWYAKAEDKMGVTRTNGIPGLPGNNNFKVMEAGARKLGYKEVHTGRM 180 NL+DWPIT AE++PWY KAED+MGVTRTNGIPGLPGNNN+KV+EAGAR+LGY+EVHTGRM Sbjct: 121 NLLDWPITRAELDPWYEKAEDRMGVTRTNGIPGLPGNNNYKVLEAGARRLGYREVHTGRM 180 Query: 181 AINSEPRDGRGSCQQIGFCFQGCKSGAKWSTLYTEIPKGEATGNLEVRPGSMVIKIEHDP 240 AINS+ R RG+CQQIGFCFQGCKSGAKWSTL EIP+GEATGNLEVRPG M I+IEHD Sbjct: 181 AINSQERHDRGACQQIGFCFQGCKSGAKWSTLIAEIPRGEATGNLEVRPGCMAIRIEHDA 240 Query: 241 SGKVTGVVYADSTGATQRQKARVVAVAGNSIESPRLLLNSASSMFPDGLANSSGQVGRNY 300 SGKVTGVVYAD TG QRQKAR+VAVAGNSIESPRLLLNSASS+FPDGLANSSGQVGRNY Sbjct: 241 SGKVTGVVYADETGTLQRQKARIVAVAGNSIESPRLLLNSASSLFPDGLANSSGQVGRNY 300 Query: 301 MRHMTGSVYASFEKSVHMYRGTTMAGIIRDEAKNDPKRGFVGGYEMETLSLGLPFMAAFL 360 MRHMTGSVY FEKSVHMYRGTTMAGIIRDEA++DP RGF GGYEMETLSLGLPFMAAFL Sbjct: 301 MRHMTGSVYGVFEKSVHMYRGTTMAGIIRDEARHDPSRGFAGGYEMETLSLGLPFMAAFL 360 Query: 361 NPGAWGRSFTSAIEGYPRMAGMWLVGEDMPQETNRVTLDPKIKDKFGMPVASVHFDDHPN 420 NPGAWGRSFTSA+E YPRMAGMWLVGEDMPQETNR+TLDP KD GMPVA VHFDDHPN Sbjct: 361 NPGAWGRSFTSAMEQYPRMAGMWLVGEDMPQETNRITLDPVQKDAHGMPVAHVHFDDHPN 420 Query: 421 DVAMRDHAYKQGSAVYEAVGATVTYPTPPYPSTHNMGTNRMSEKPRDGVVNKFGQTHDIK 480 D+AMRDHAY+QG+AVYEAVGATVTYPTPPYPSTHNMGTNRMS +PRDGVVNKFGQTHD+ Sbjct: 421 DIAMRDHAYRQGAAVYEAVGATVTYPTPPYPSTHNMGTNRMSARPRDGVVNKFGQTHDVG 480 Query: 481 NLFVSDGSQFTSGAACNPTLTIVSLAIRQADHIASAMQRKEI 522 NLFVSDGSQFTSGAACNPTLTIV+LA+RQADHIA AMQR+EI Sbjct: 481 NLFVSDGSQFTSGAACNPTLTIVALALRQADHIAGAMQRREI 522 >ref|YP_001523879.1| 2-keto-gluconate dehydrogenase [Azorhizobium caulinodans ORS 571] dbj|BAF86961.1| putative 2-keto-gluconate dehydrogenase [Azorhizobium caulinodans ORS 571] Length = 522 Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/522 (83%), Positives = 477/522 (91%) Query: 1 MAKFDLNDSGVVVIVGSGAGGGTLGNELAQKGVKVVILEAGPRIENQDFINDEWDSFTQL 60 MA+FD ND VVVIVGSGAGGGTLGNELAQKG+KVVILEAG R E QDF+NDEW+SF QL Sbjct: 1 MAQFDRNDDSVVVIVGSGAGGGTLGNELAQKGIKVVILEAGARNEIQDFVNDEWESFAQL 60 Query: 61 AWSDARSTSGSWRVHQDFPGLPAWIVKAVGGSTTHWAGASLRFDEHEFKIKSAYGGIPGA 120 AW+D R SGSWRV +DFP LPAWIVK+VGGST HWAGASLRF++HEFK SAYGGI GA Sbjct: 61 AWTDMRVASGSWRVARDFPNLPAWIVKSVGGSTVHWAGASLRFEQHEFKAASAYGGIKGA 120 Query: 121 NLIDWPITLAEMEPWYAKAEDKMGVTRTNGIPGLPGNNNFKVMEAGARKLGYKEVHTGRM 180 NL+DWPIT AE++P+YAKAEDKMGVTRTN IPGLPGNNN KV+EAGARK+GYK+ TGRM Sbjct: 121 NLLDWPITKAELDPYYAKAEDKMGVTRTNNIPGLPGNNNEKVLEAGARKIGYKDFSTGRM 180 Query: 181 AINSEPRDGRGSCQQIGFCFQGCKSGAKWSTLYTEIPKGEATGNLEVRPGSMVIKIEHDP 240 AINS+PRDGRGSCQQIGFCFQGCKSGAKWSTLYTEIPKGEATGNLEVRP V KIEHD Sbjct: 181 AINSQPRDGRGSCQQIGFCFQGCKSGAKWSTLYTEIPKGEATGNLEVRPNCHVAKIEHDA 240 Query: 241 SGKVTGVVYADSTGATQRQKARVVAVAGNSIESPRLLLNSASSMFPDGLANSSGQVGRNY 300 +GKVT VVY D TGATQRQKARVVAVAGNSIESPRLLLNSASS+FP+GLANSSGQVGRNY Sbjct: 241 NGKVTAVVYFDETGATQRQKARVVAVAGNSIESPRLLLNSASSLFPNGLANSSGQVGRNY 300 Query: 301 MRHMTGSVYASFEKSVHMYRGTTMAGIIRDEAKNDPKRGFVGGYEMETLSLGLPFMAAFL 360 MRH+TGSVYA+FEK VHMYRGTTMAGIIRDEA++DP RGF GGYEMETLSLGLPFMAAFL Sbjct: 301 MRHVTGSVYAAFEKPVHMYRGTTMAGIIRDEARHDPGRGFAGGYEMETLSLGLPFMAAFL 360 Query: 361 NPGAWGRSFTSAIEGYPRMAGMWLVGEDMPQETNRVTLDPKIKDKFGMPVASVHFDDHPN 420 NPGAWGRSFTSA+E YPRMAGMWLVGEDMPQE N +TLD + KDKFG+PVA+VH+DDH N Sbjct: 361 NPGAWGRSFTSAMENYPRMAGMWLVGEDMPQEKNAITLDKEAKDKFGLPVANVHYDDHSN 420 Query: 421 DVAMRDHAYKQGSAVYEAVGATVTYPTPPYPSTHNMGTNRMSEKPRDGVVNKFGQTHDIK 480 DVAMR+H Y+QG+A+YEAVGA TYPT PYPSTHN+GTNRMSEKPRDGVVNKFGQ+HDIK Sbjct: 421 DVAMRNHGYQQGAALYEAVGAVQTYPTTPYPSTHNLGTNRMSEKPRDGVVNKFGQSHDIK 480 Query: 481 NLFVSDGSQFTSGAACNPTLTIVSLAIRQADHIASAMQRKEI 522 NLFVSDGSQFT+ AACNPTLTIV+LAIRQADH+A M+R++I Sbjct: 481 NLFVSDGSQFTTSAACNPTLTIVALAIRQADHMAELMRRRDI 522