BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0093.0022.p (283 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773741.1| ABC transporter permease [Bradyrhizobium japoni... 532 e-149 ref|YP_001242627.1| putative ABC transporter permease [Bradyrhiz... 521 e-146 ref|YP_001203362.1| ABC transporter permease [Bradyrhizobium sp.... 520 e-146 ref|YP_550333.1| binding-protein-dependent transport systems inn... 461 e-128 ref|ZP_08872775.1| binding-protein-dependent transport systems i... 461 e-128 >ref|NP_773741.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110] dbj|BAC52366.1| blr7101 [Bradyrhizobium japonicum USDA 110] Length = 283 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 256/283 (90%), Positives = 273/283 (96%) Query: 1 MKLPTLREVGTEAKLLLIGIPVFIWTMIPIYHMFVFAISPKEDAFSGKLWPTHPTLHNFE 60 MKLP+LREV TEA+LLLIGIPVFIWTM+PIYHMF+FAISPKEDAFSGKLWP HPTLHNFE Sbjct: 1 MKLPSLREVATEARLLLIGIPVFIWTMVPIYHMFLFAISPKEDAFSGKLWPDHPTLHNFE 60 Query: 61 IVFNQQHYFLRDFWIQFWNSTVIALAVGALTLFVATAAAFSISRLRVPGGRAVMNMALFT 120 IVF QQHYFLRDF++QFWNS VIA +VG LTLF+ATAAAFSISRLRVPGGR VMN+ALFT Sbjct: 61 IVFKQQHYFLRDFYVQFWNSLVIAASVGVLTLFIATAAAFSISRLRVPGGRIVMNLALFT 120 Query: 121 YFIPAAFLAVPMYRTMGNYGLLNNHWSLILAMVTIAAPYAIWVLKQASDKLPVELDEAAT 180 YFIPAAFLAVPMYRTMGNYGLLNNHWSLILAMVTIA+PYAIWVLKQASDKLPVELDEAA Sbjct: 121 YFIPAAFLAVPMYRTMGNYGLLNNHWSLILAMVTIASPYAIWVLKQASDKLPVELDEAAV 180 Query: 181 MDGATTLQLFRLVYVPLMMPSLVAVGTYAILLAWNEYLYAFLLLSKDTDITLPVALGNFL 240 MDGATTLQ+FRLVY+PLMMPSLVA+GTYA+LLAWNEYLYAFLLLS D +ITLPVALGNFL Sbjct: 181 MDGATTLQIFRLVYLPLMMPSLVAIGTYAVLLAWNEYLYAFLLLSNDREITLPVALGNFL 240 Query: 241 AADDSPWELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS 283 AADDSPWELLMTTGFIYALPPAA+YYAF+RYMVGGLTAGAVKS Sbjct: 241 AADDSPWELLMTTGFIYALPPAAIYYAFRRYMVGGLTAGAVKS 283 >ref|YP_001242627.1| putative ABC transporter permease [Bradyrhizobium sp. BTAi1] gb|ABQ38721.1| carbohydrate ABC transporter membrane protein 2, CUT1 family [Bradyrhizobium sp. BTAi1] Length = 283 Score = 521 bits (1341), Expect = e-146, Method: Compositional matrix adjust. Identities = 254/283 (89%), Positives = 268/283 (94%) Query: 1 MKLPTLREVGTEAKLLLIGIPVFIWTMIPIYHMFVFAISPKEDAFSGKLWPTHPTLHNFE 60 MKLPTLREVGTEA+LLLIGIPVFIWTMIPIYHMF+FAISPKEDAFSGKLWP HPTLHNF Sbjct: 1 MKLPTLREVGTEARLLLIGIPVFIWTMIPIYHMFLFAISPKEDAFSGKLWPDHPTLHNFS 60 Query: 61 IVFNQQHYFLRDFWIQFWNSTVIALAVGALTLFVATAAAFSISRLRVPGGRAVMNMALFT 120 IVF+QQHYFLRDFW+QF NS VIA+AVGALTL +AT AA++ISRLRVPG R VMN+ALFT Sbjct: 61 IVFHQQHYFLRDFWVQFGNSVVIAVAVGALTLIIATCAAYAISRLRVPGSRVVMNLALFT 120 Query: 121 YFIPAAFLAVPMYRTMGNYGLLNNHWSLILAMVTIAAPYAIWVLKQASDKLPVELDEAAT 180 YFIPAAFLAVPMYRTMG YGLLNN WSLILAMVTIA+PYAIWVLKQASDKLPVELDEAA Sbjct: 121 YFIPAAFLAVPMYRTMGKYGLLNNDWSLILAMVTIASPYAIWVLKQASDKLPVELDEAAV 180 Query: 181 MDGATTLQLFRLVYVPLMMPSLVAVGTYAILLAWNEYLYAFLLLSKDTDITLPVALGNFL 240 MDGA+ LQ+FRLVYVPLMMPSLVA+GTYA+LLAWNEYLYAFLLLS D ITLPVALGNFL Sbjct: 181 MDGASPLQIFRLVYVPLMMPSLVAIGTYAVLLAWNEYLYAFLLLSNDKAITLPVALGNFL 240 Query: 241 AADDSPWELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS 283 AADDSPWELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS Sbjct: 241 AADDSPWELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS 283 >ref|YP_001203362.1| ABC transporter permease [Bradyrhizobium sp. ORS 278] emb|CAL75125.1| probable ABC transporter permease protein [Bradyrhizobium sp. ORS 278] Length = 283 Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust. Identities = 254/283 (89%), Positives = 267/283 (94%) Query: 1 MKLPTLREVGTEAKLLLIGIPVFIWTMIPIYHMFVFAISPKEDAFSGKLWPTHPTLHNFE 60 MKLPTLREVGTEA+LLLIGIPVFIWTMIPIYHMF+FAISPKEDAFSGKLWP HPTLHNF Sbjct: 1 MKLPTLREVGTEARLLLIGIPVFIWTMIPIYHMFLFAISPKEDAFSGKLWPDHPTLHNFS 60 Query: 61 IVFNQQHYFLRDFWIQFWNSTVIALAVGALTLFVATAAAFSISRLRVPGGRAVMNMALFT 120 IVF+QQHYFLRDFWIQF NS +IA AVGALTL +AT AA++ISRLRVPG R VMN+ALFT Sbjct: 61 IVFHQQHYFLRDFWIQFGNSVIIAAAVGALTLIIATCAAYAISRLRVPGSRVVMNLALFT 120 Query: 121 YFIPAAFLAVPMYRTMGNYGLLNNHWSLILAMVTIAAPYAIWVLKQASDKLPVELDEAAT 180 YFIPAAFLAVPMYRTMG YGLLNN WSLILAMVTIA+PYAIWVLKQASDKLPVELDEAA Sbjct: 121 YFIPAAFLAVPMYRTMGKYGLLNNDWSLILAMVTIASPYAIWVLKQASDKLPVELDEAAV 180 Query: 181 MDGATTLQLFRLVYVPLMMPSLVAVGTYAILLAWNEYLYAFLLLSKDTDITLPVALGNFL 240 MDGA+ LQ+FRLVYVPLMMPSLVA+GTYA+LLAWNEYLYAFLLLS D ITLPVALGNFL Sbjct: 181 MDGASPLQIFRLVYVPLMMPSLVAIGTYAVLLAWNEYLYAFLLLSNDKAITLPVALGNFL 240 Query: 241 AADDSPWELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS 283 AADDSPWELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS Sbjct: 241 AADDSPWELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS 283 >ref|YP_550333.1| binding-protein-dependent transport systems inner membrane component [Polaromonas sp. JS666] gb|ABE45435.1| carbohydrate ABC transporter membrane protein 2, CUT1 family [Polaromonas sp. JS666] Length = 283 Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust. Identities = 225/283 (79%), Positives = 251/283 (88%) Query: 1 MKLPTLREVGTEAKLLLIGIPVFIWTMIPIYHMFVFAISPKEDAFSGKLWPTHPTLHNFE 60 MK T + V TEAKLLLIGIPV +WT+IPIYHM +FAISP++ A SG+LWP +PTL NF Sbjct: 1 MKRITFKTVATEAKLLLIGIPVLLWTIIPIYHMVLFAISPRDQATSGRLWPKNPTLDNFS 60 Query: 61 IVFNQQHYFLRDFWIQFWNSTVIALAVGALTLFVATAAAFSISRLRVPGGRAVMNMALFT 120 VF+Q+H++L FW+Q NS VIAL+VG LTL V+TAAAF+ISRLRVPGGR VMNMALFT Sbjct: 61 FVFHQKHFYLDHFWVQMGNSLVIALSVGFLTLAVSTAAAFAISRLRVPGGRTVMNMALFT 120 Query: 121 YFIPAAFLAVPMYRTMGNYGLLNNHWSLILAMVTIAAPYAIWVLKQASDKLPVELDEAAT 180 YFIPAAFLAVPMY+TMGNYGLLN+ W+LILAMVTIA+PY IWVLKQASDKLP ELDEAA Sbjct: 121 YFIPAAFLAVPMYKTMGNYGLLNSQWALILAMVTIASPYCIWVLKQASDKLPYELDEAAK 180 Query: 181 MDGATTLQLFRLVYVPLMMPSLVAVGTYAILLAWNEYLYAFLLLSKDTDITLPVALGNFL 240 MDGAT LQLFRLVY+PLM+PSLVAVGTYA+LLAWNEYLYAFLLLS DT +TL VALGNFL Sbjct: 181 MDGATALQLFRLVYLPLMVPSLVAVGTYALLLAWNEYLYAFLLLSNDTSVTLAVALGNFL 240 Query: 241 AADDSPWELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS 283 +ADDSPWELLMTTG IYALPPAA+YY FKRYMV GLTAGAVKS Sbjct: 241 SADDSPWELLMTTGLIYALPPAAIYYTFKRYMVSGLTAGAVKS 283 >ref|ZP_08872775.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter sp. At4] Length = 291 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 221/277 (79%), Positives = 246/277 (88%) Query: 7 REVGTEAKLLLIGIPVFIWTMIPIYHMFVFAISPKEDAFSGKLWPTHPTLHNFEIVFNQQ 66 R+VG EA+LLLIGIPV WT+IPIYH+ +F ISPKE A SG+LWP HPTLHNF +VF QQ Sbjct: 15 RKVGAEARLLLIGIPVLFWTLIPIYHLVLFTISPKESALSGRLWPEHPTLHNFSVVFRQQ 74 Query: 67 HYFLRDFWIQFWNSTVIALAVGALTLFVATAAAFSISRLRVPGGRAVMNMALFTYFIPAA 126 H++L FW+Q NS IA+A GA+TL VAT AAF+ISRL+V GGR++MN+ALFTYFIPAA Sbjct: 75 HHYLNHFWLQMGNSLFIAVAAGAITLIVATGAAFAISRLKVRGGRSIMNLALFTYFIPAA 134 Query: 127 FLAVPMYRTMGNYGLLNNHWSLILAMVTIAAPYAIWVLKQASDKLPVELDEAATMDGATT 186 FLAVPMY+TMGNYGLLN+ WSLILAMVTIA+PYAIWVLKQASDKLP ELDEAA MDGAT Sbjct: 135 FLAVPMYKTMGNYGLLNSQWSLILAMVTIASPYAIWVLKQASDKLPYELDEAAIMDGATP 194 Query: 187 LQLFRLVYVPLMMPSLVAVGTYAILLAWNEYLYAFLLLSKDTDITLPVALGNFLAADDSP 246 LQL RLVY+PLMMPSLVAVGTYA+LLAWNEYLYAFLLLSKDT +TL VALGNFLAADDSP Sbjct: 195 LQLLRLVYLPLMMPSLVAVGTYALLLAWNEYLYAFLLLSKDTSVTLGVALGNFLAADDSP 254 Query: 247 WELLMTTGFIYALPPAAVYYAFKRYMVGGLTAGAVKS 283 WELLMTTG +YALPPAA+YY FKRYMV GLT GAVKS Sbjct: 255 WELLMTTGLLYALPPAAIYYVFKRYMVSGLTEGAVKS 291