BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0093.0019.p (374 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773745.1| ABC transporter ATP-binding protein [Bradyrhizo... 587 e-165 ref|YP_001242631.1| putrescine ABC transporter ATP-binding prote... 564 e-158 ref|YP_001203358.1| putrescine ABC transporter ATP-binding prote... 559 e-157 ref|YP_533799.1| spermidine/putrescine ABC transporter ATP-bindi... 536 e-150 ref|NP_949496.1| spermidine/putrescine ABC transporter ATP-bindi... 529 e-148 >ref|NP_773745.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC52370.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 390 Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust. Identities = 286/367 (77%), Positives = 319/367 (86%) Query: 6 VSDMPLLRIEGVAKSFGNFRAVDKLSLDIRAGEFFALLGPSGCGKTTLLRMLAGFETPDE 65 V+ PLLRIEGV K+FG FRAVD +SLDI+AGEFFALLGPSGCGKTTLLRMLAGFE PDE Sbjct: 22 VAGQPLLRIEGVTKTFGTFRAVDGVSLDIKAGEFFALLGPSGCGKTTLLRMLAGFEAPDE 81 Query: 66 GRILLGGSDIAQVLPHERPVNMMFQNYALFPHLSVRDNIAFGLKRAGMARGDIAGRVAEM 125 GRILLGG DIAQ LPHERP+NMMFQNYALFPHLSVRDNIAFGLKRAG+AR DIA RVAEM Sbjct: 82 GRILLGGKDIAQALPHERPINMMFQNYALFPHLSVRDNIAFGLKRAGLARADIATRVAEM 141 Query: 126 VALVKLEGMEKRKPDQLSGGQRQRVALARSLARRPQVLLLDEPFAALDKKLRESTQGELM 185 +ALVKLEG+EKRKPDQLSGGQRQRVALAR+LARRPQ+LLLDEP AALDKKLRESTQGELM Sbjct: 142 LALVKLEGLEKRKPDQLSGGQRQRVALARALARRPQLLLLDEPLAALDKKLRESTQGELM 201 Query: 186 ELQRRLGMTFIIVTHDQEEAMTMAGRIGVMDAGRLVQVATPRNLYEAPASRWIAEFVGDI 245 ELQRRLGMTFIIVTHDQEEAMTMA +IGVM AG+L QVA+PR LYEAP SRWIAEFVGDI Sbjct: 202 ELQRRLGMTFIIVTHDQEEAMTMASQIGVMKAGKLAQVASPRELYEAPRSRWIAEFVGDI 261 Query: 246 NLFNGEVTARENGRLTVATADAGTLAVSELWPPVTRQVVAVAIRPEKVKLSRRAPATDGG 305 NLF+ E R+ RL + T DAGTL V+E PV ++VAIRPEKVKLSRR P ++ G Sbjct: 262 NLFDAESRLRDGHRLVIGTRDAGTLVVAEPREPVGAGKLSVAIRPEKVKLSRRGPVSEAG 321 Query: 306 ASQAINRLEGVVTDVNYLGGVTSYRVKLETGAVVRSSMANTARLDVDAYLAGQRVVAWFT 365 AINRL+GV+ D+ YLGG T+Y+VKL+TG +V++S+AN+ARLDVDAY Q VVAWFT Sbjct: 322 YETAINRLDGVIADICYLGGTTTYKVKLDTGGMVQASVANSARLDVDAYSLNQHVVAWFT 381 Query: 366 ADDCLVL 372 DDC+VL Sbjct: 382 PDDCVVL 388 >ref|YP_001242631.1| putrescine ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ38725.1| putrescine transport protein (ABC superfamily, atp_bind) [Bradyrhizobium sp. BTAi1] Length = 393 Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust. Identities = 281/364 (77%), Positives = 316/364 (86%) Query: 11 LLRIEGVAKSFGNFRAVDKLSLDIRAGEFFALLGPSGCGKTTLLRMLAGFETPDEGRILL 70 +LRIE V K+FG+FRAVD +SLDIRAGEFFALLGPSGCGKTTLLRMLAGFETPDEGRILL Sbjct: 30 ILRIENVVKTFGSFRAVDGVSLDIRAGEFFALLGPSGCGKTTLLRMLAGFETPDEGRILL 89 Query: 71 GGSDIAQVLPHERPVNMMFQNYALFPHLSVRDNIAFGLKRAGMARGDIAGRVAEMVALVK 130 G DIA VLPH+RPVNMMFQNYALFPHL+VRDNIAFGLKRAGM RG+IA RVAEMVALV+ Sbjct: 90 SGEDIAPVLPHQRPVNMMFQNYALFPHLNVRDNIAFGLKRAGMPRGEIASRVAEMVALVR 149 Query: 131 LEGMEKRKPDQLSGGQRQRVALARSLARRPQVLLLDEPFAALDKKLRESTQGELMELQRR 190 LEG+EKRKPDQLSGGQ+QRVALARSLARRP+VLLLDEP AALDKKLRESTQ ELMELQR+ Sbjct: 150 LEGLEKRKPDQLSGGQKQRVALARSLARRPKVLLLDEPMAALDKKLRESTQFELMELQRK 209 Query: 191 LGMTFIIVTHDQEEAMTMAGRIGVMDAGRLVQVATPRNLYEAPASRWIAEFVGDINLFNG 250 LGMTFIIVTHDQEEAMT+A RIGVM AG+L QVA PR LYE PASRW+AEFVGDINLF G Sbjct: 210 LGMTFIIVTHDQEEAMTVASRIGVMKAGQLEQVAVPRRLYEEPASRWVAEFVGDINLFEG 269 Query: 251 EVTARENGRLTVATADAGTLAVSELWPPVTRQVVAVAIRPEKVKLSRRAPATDGGASQAI 310 EVTARE RL VAT+ AG L V++ PV VAVAIRPEK++L+ R PA D A+ A+ Sbjct: 270 EVTAREALRLRVATSTAGELVVAQPVAPVAETKVAVAIRPEKIRLALRGPAADAAAAAAL 329 Query: 311 NRLEGVVTDVNYLGGVTSYRVKLETGAVVRSSMANTARLDVDAYLAGQRVVAWFTADDCL 370 NR+EGV+TD +YLGG T Y+++L+ GAV+ ++ ANTARLD D Y QRVVAWFT DDC+ Sbjct: 330 NRVEGVITDASYLGGKTVYKIRLDGGAVLHAAQANTARLDADGYGVNQRVVAWFTPDDCV 389 Query: 371 VLEQ 374 VLE+ Sbjct: 390 VLER 393 >ref|YP_001203358.1| putrescine ABC transporter ATP-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL75121.1| putrescine transport protein (ABC superfamily, atp_bind) [Bradyrhizobium sp. ORS 278] Length = 390 Score = 559 bits (1440), Expect = e-157, Method: Compositional matrix adjust. Identities = 275/364 (75%), Positives = 313/364 (85%), Gaps = 3/364 (0%) Query: 11 LLRIEGVAKSFGNFRAVDKLSLDIRAGEFFALLGPSGCGKTTLLRMLAGFETPDEGRILL 70 +LRI+ VAK+FG+FRAVD +SLDIRAGEFFALLGPSGCGKTTLLRMLAGFETPDEGRILL Sbjct: 30 ILRIDNVAKAFGSFRAVDGVSLDIRAGEFFALLGPSGCGKTTLLRMLAGFETPDEGRILL 89 Query: 71 GGSDIAQVLPHERPVNMMFQNYALFPHLSVRDNIAFGLKRAGMARGDIAGRVAEMVALVK 130 G DIAQ+LPHERP+NMMFQNYALFPHL+VRDNIAFGLKRAGM R +IA RVAEMVALV+ Sbjct: 90 SGEDIAQLLPHERPINMMFQNYALFPHLNVRDNIAFGLKRAGMPRAEIATRVAEMVALVR 149 Query: 131 LEGMEKRKPDQLSGGQRQRVALARSLARRPQVLLLDEPFAALDKKLRESTQGELMELQRR 190 L+G+EKRKPDQLSGGQ+QRVALARSLARRPQVLLLDEP AALDKKLRESTQ ELMELQRR Sbjct: 150 LDGLEKRKPDQLSGGQKQRVALARSLARRPQVLLLDEPMAALDKKLRESTQLELMELQRR 209 Query: 191 LGMTFIIVTHDQEEAMTMAGRIGVMDAGRLVQVATPRNLYEAPASRWIAEFVGDINLFNG 250 LGMTFIIVTHDQEEAMT+A RIGVM+AG+L QVA PR LYE PASRW+AEFVGDIN+F G Sbjct: 210 LGMTFIIVTHDQEEAMTVATRIGVMNAGKLEQVAVPRRLYEEPASRWVAEFVGDINMFEG 269 Query: 251 EVTARENGRLTVATADAGTLAVSELWPPVTRQVVAVAIRPEKVKLSRRAPATDGGASQAI 310 EVTARE RL V+TA AG L ++ P+T VAVAIRPEK++L+ R PA D I Sbjct: 270 EVTAREPLRLRVSTAHAGELVAAQPVVPITESKVAVAIRPEKIRLALRRPAADAA---GI 326 Query: 311 NRLEGVVTDVNYLGGVTSYRVKLETGAVVRSSMANTARLDVDAYLAGQRVVAWFTADDCL 370 N ++G ++D +YLGG T Y+++L+ GAV+ +S ANTARLD D Y QRVVAWFT DDC+ Sbjct: 327 NCVQGAISDASYLGGKTVYKIRLDGGAVLHASQANTARLDADGYGLNQRVVAWFTPDDCV 386 Query: 371 VLEQ 374 VLE+ Sbjct: 387 VLER 390 >ref|YP_533799.1| spermidine/putrescine ABC transporter ATP-binding subunit [Rhodopseudomonas palustris BisB18] gb|ABD89480.1| spermidine/putrescine ABC transporter ATP-binding subunit [Rhodopseudomonas palustris BisB18] Length = 381 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 264/372 (70%), Positives = 316/372 (84%), Gaps = 3/372 (0%) Query: 4 PAVSDMPLLRIEGVAKSFGNFRAVDKLSLDIRAGEFFALLGPSGCGKTTLLRMLAGFETP 63 P D+PLLRIE V K FG AVD LSLDI+AGEFFALLGPSGCGKTTLLRMLAGFETP Sbjct: 12 PPSPDVPLLRIEAVEKRFGGSVAVDGLSLDIKAGEFFALLGPSGCGKTTLLRMLAGFETP 71 Query: 64 DEGRILLGGSDIAQVLPHERPVNMMFQNYALFPHLSVRDNIAFGLKRAGMARGDIAGRVA 123 D GRILL G D+A VLPH+RPVNMMFQNYALFPHLSV+ NIAFGLKRAG+ R +I R+A Sbjct: 72 DRGRILLDGQDVALVLPHQRPVNMMFQNYALFPHLSVKANIAFGLKRAGLKRAEIKARIA 131 Query: 124 EMVALVKLEGMEKRKPDQLSGGQRQRVALARSLARRPQVLLLDEPFAALDKKLRESTQGE 183 EM+ALV+L+G+ R+PDQLSGGQ+QRVALAR+LARRP++LLLDEP AALDKKLRE+TQ E Sbjct: 132 EMLALVRLDGLAHRRPDQLSGGQQQRVALARALARRPKLLLLDEPLAALDKKLREATQRE 191 Query: 184 LMELQRRLGMTFIIVTHDQEEAMTMAGRIGVMDAGRLVQVATPRNLYEAPASRWIAEFVG 243 L+ELQRRLG TF+IVTHDQ+EAMT+A RIGVM AGRL QVA PR LYEAPASRW+AEFVG Sbjct: 192 LIELQRRLGTTFVIVTHDQDEAMTVADRIGVMSAGRLEQVAAPRQLYEAPASRWVAEFVG 251 Query: 244 DINLFNGEVTARENGRLTVATADAGTLAVSELWPPV-TRQVVAVAIRPEKVKLSRRAPAT 302 D+N+ +G + A++ RLTVATADA TL+V+ PV T + V+VAIRPEK+KLSRR P+ Sbjct: 252 DVNILDGRIAAQDAHRLTVATADAVTLSVAPPRQPVATDRAVSVAIRPEKIKLSRRGPSP 311 Query: 303 DGGASQAINRLEGVVTDVNYLGGVTSYRVKLETGAVVRSSMANTARLDVDAYLAGQRVVA 362 D A+ A+NRL+GVV++V+YLGG+TSY VKL+ GA +R+S+ANTAR++VD + GQ VVA Sbjct: 312 D--AAGALNRLDGVVSEVSYLGGLTSYTVKLDAGASLRASLANTARVEVDEFSRGQHVVA 369 Query: 363 WFTADDCLVLEQ 374 WF DDC+VL++ Sbjct: 370 WFAPDDCVVLQR 381 >ref|NP_949496.1| spermidine/putrescine ABC transporter ATP-binding subunit [Rhodopseudomonas palustris CGA009] emb|CAE29601.1| polyamine ABC transporter, ATP-binding protein [Rhodopseudomonas palustris CGA009] Length = 380 Score = 529 bits (1363), Expect = e-148, Method: Compositional matrix adjust. Identities = 268/372 (72%), Positives = 310/372 (83%), Gaps = 1/372 (0%) Query: 2 PEPA-VSDMPLLRIEGVAKSFGNFRAVDKLSLDIRAGEFFALLGPSGCGKTTLLRMLAGF 60 P PA V+ PLLRIE V K FG F AVD+LSLDI+AGEFFALLGPSGCGKTTLLRMLAGF Sbjct: 7 PAPAEVAGEPLLRIEAVEKRFGGFVAVDRLSLDIKAGEFFALLGPSGCGKTTLLRMLAGF 66 Query: 61 ETPDEGRILLGGSDIAQVLPHERPVNMMFQNYALFPHLSVRDNIAFGLKRAGMARGDIAG 120 ETPD GRILL G DIA VLPHERPVNMMFQNYALFPHL+V NIAFGLKRA + R +I Sbjct: 67 ETPDAGRILLNGVDIAAVLPHERPVNMMFQNYALFPHLTVAANIAFGLKRARLPRKEIKA 126 Query: 121 RVAEMVALVKLEGMEKRKPDQLSGGQRQRVALARSLARRPQVLLLDEPFAALDKKLREST 180 RVAEM+ALV+LEG+ KRKPDQLSGGQ+QRVALAR+LA RP++LLLDEP AALDKKLREST Sbjct: 127 RVAEMLALVRLEGLGKRKPDQLSGGQQQRVALARALALRPKLLLLDEPMAALDKKLREST 186 Query: 181 QGELMELQRRLGMTFIIVTHDQEEAMTMAGRIGVMDAGRLVQVATPRNLYEAPASRWIAE 240 Q ELM LQ+RLGMTF+IVTHDQ+EAMTMA RIGVM AG+L QVA PR LYEAPASRW+AE Sbjct: 187 QLELMALQKRLGMTFVIVTHDQQEAMTMADRIGVMRAGKLDQVAVPRQLYEAPASRWVAE 246 Query: 241 FVGDINLFNGEVTARENGRLTVATADAGTLAVSELWPPVTRQVVAVAIRPEKVKLSRRAP 300 FVGD+N+ G V R+NGR+TVAT AG + V+E + + ++VAIRPEK+KLS R P Sbjct: 247 FVGDVNMLEGSVAGRDNGRITVATGGAGEVVVAEPREALQTEAISVAIRPEKIKLSLRGP 306 Query: 301 ATDGGASQAINRLEGVVTDVNYLGGVTSYRVKLETGAVVRSSMANTARLDVDAYLAGQRV 360 A D G + AINRL+G +TD+ Y GG+TSY+V+L+ GA + ++MANT RLDVDAY AGQ V Sbjct: 307 AADAGHADAINRLDGTITDIGYAGGMTSYKVRLDHGATLLAAMANTTRLDVDAYHAGQHV 366 Query: 361 VAWFTADDCLVL 372 VAWF+ DDC+VL Sbjct: 367 VAWFSPDDCVVL 378