BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0093.0013.p         (111 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773746.1| glycerol-3-phosphate dehydrogenase [Bradyrhizob...   166   1e-39
ref|YP_001203357.1| glycerol-3-phosphate dehydrogenase [Bradyrhi...   146   1e-33
ref|YP_001242632.1| glycerol-3-phosphate dehydrogenase [Bradyrhi...   132   1e-29
ref|ZP_08627298.1| glycerol-3-phosphate dehydrogenase [Bradyrhiz...   131   3e-29
gb|ACV30047.1| putative glycerol-3-phosphate dehydrogenase [uncu...   103   1e-20

>ref|NP_773746.1| glycerol-3-phosphate dehydrogenase [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC52371.1| glycerol-3-phosphate dehydrogenase [Bradyrhizobium japonicum USDA
           110]
          Length = 499

 Score =  166 bits (419), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/109 (74%), Positives = 92/109 (84%)

Query: 3   LPGGEFAWQRFETEVEIARDRWRFLGEAQARRLVAAYGLNARDVLGDARETADLGPAFGP 62
           LPGG+FAW RF+TEV++ARDRWRFL E +A+RLVAAYG     VLG+AR   +LGP FGP
Sbjct: 378 LPGGDFAWDRFDTEVDLARDRWRFLSEPEAQRLVAAYGSRLPAVLGEARTRDELGPTFGP 437

Query: 63  ELTGAEVRYLMRREWARFPDDVLWRRSKLGLTMPQADRDALAAFMAKAD 111
           ELTGAEVRYLM  EWARFP+DVLWRRSKLGLTMP+ADRD LAAFMA  +
Sbjct: 438 ELTGAEVRYLMSHEWARFPEDVLWRRSKLGLTMPKADRDGLAAFMADVN 486


>ref|YP_001203357.1| glycerol-3-phosphate dehydrogenase [Bradyrhizobium sp. ORS 278]
 emb|CAL75120.1| Glycerol-3-phosphate dehydrogenase [Bradyrhizobium sp. ORS 278]
          Length = 516

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/105 (67%), Positives = 85/105 (80%)

Query: 3   LPGGEFAWQRFETEVEIARDRWRFLGEAQARRLVAAYGLNARDVLGDARETADLGPAFGP 62
           LPGG F WQ FE  V+ A DRWRFLGEA+ARR+V AYG    ++LG+AR  +DLG AFG 
Sbjct: 381 LPGGNFDWQHFEDLVDEAGDRWRFLGEAEARRMVGAYGTRLSEILGEARSRSDLGQAFGA 440

Query: 63  ELTGAEVRYLMRREWARFPDDVLWRRSKLGLTMPQADRDALAAFM 107
           +LT AEVRYLM +EWARFP+DVLWRR+KLGL++  A+RDALAAFM
Sbjct: 441 QLTEAEVRYLMTKEWARFPEDVLWRRTKLGLSLSAAERDALAAFM 485


>ref|YP_001242632.1| glycerol-3-phosphate dehydrogenase [Bradyrhizobium sp. BTAi1]
 gb|ABQ38726.1| Glycerol-3-phosphate dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 515

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/100 (65%), Positives = 78/100 (78%)

Query: 2   PLPGGEFAWQRFETEVEIARDRWRFLGEAQARRLVAAYGLNARDVLGDARETADLGPAFG 61
           PLPGG+F W RF+  V+  R+RWRFL EA+ARRL  AYG    DVLGDA   A+LG AFG
Sbjct: 379 PLPGGDFDWNRFDDLVDDVRERWRFLSEAEARRLAGAYGTRLADVLGDASSRAELGRAFG 438

Query: 62  PELTGAEVRYLMRREWARFPDDVLWRRSKLGLTMPQADRD 101
            +LT AEVRYLM +EWARFPDDVLWRR+KLGLT+  A+++
Sbjct: 439 SQLTEAEVRYLMTKEWARFPDDVLWRRTKLGLTLGAAEQE 478


>ref|ZP_08627298.1| glycerol-3-phosphate dehydrogenase [Bradyrhizobiaceae bacterium
           SG-6C]
 gb|EGP09924.1| glycerol-3-phosphate dehydrogenase [Bradyrhizobiaceae bacterium
           SG-6C]
          Length = 481

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 64/100 (64%), Positives = 76/100 (76%)

Query: 2   PLPGGEFAWQRFETEVEIARDRWRFLGEAQARRLVAAYGLNARDVLGDARETADLGPAFG 61
           PLPGG+FA + F+ +V+ AR+RW FLGE  ARRLVAAYG     +LG A+   DLGP FG
Sbjct: 373 PLPGGDFAQESFDDQVDDARERWTFLGEHHARRLVAAYGTRIDQILGAAKSMDDLGPRFG 432

Query: 62  PELTGAEVRYLMRREWARFPDDVLWRRSKLGLTMPQADRD 101
            +LTGAEVRYLM+ E+ARF DD+LWRRSKLGL M   DRD
Sbjct: 433 DDLTGAEVRYLMKDEFARFADDILWRRSKLGLNMSGQDRD 472


>gb|ACV30047.1| putative glycerol-3-phosphate dehydrogenase [uncultured bacterium
           B7P37metaSE]
          Length = 507

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/106 (50%), Positives = 66/106 (62%), Gaps = 1/106 (0%)

Query: 2   PLPGGEFAWQRFETEVEIARDRWRFLGEAQARRLVAAYGLNARDVLGDARETADLGPAFG 61
           PLPGG+F W   E +V   R  W FL EA+  RL+ AYG     +L   +   D+ P FG
Sbjct: 384 PLPGGDFHWNAIEGQVTQTRQSWPFLTEAETWRLLRAYGTRVERILAGLKRREDMAPFFG 443

Query: 62  PELTGAEVRYLMRREWARFPDDVLWRRSKLGLTMPQADRDALAAFM 107
           P L+ AEVRYL   EWAR  DDVLWRRSKLGL++   ++ ALA FM
Sbjct: 444 P-LSAAEVRYLRAHEWARTVDDVLWRRSKLGLSLGATEKAALAQFM 488