BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0093.0009.p (341 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001770422.1| NMT1/THI5-like domain-containing protein [Me... 516 e-144 ref|ZP_00963414.1| hypothetical protein NAS141_15818 [Sulfitobac... 435 e-120 ref|ZP_05102193.1| Tat pathway signal sequence domain protein [R... 434 e-120 ref|ZP_01035704.1| ABC transporter, periplasmic substrate bindin... 431 e-119 ref|YP_004692193.1| NMT1/THI5 family protein [Roseobacter litora... 425 e-117 >ref|YP_001770422.1| NMT1/THI5-like domain-containing protein [Methylobacterium sp. 4-46] gb|ACA17988.1| NMT1/THI5 like domain protein [Methylobacterium sp. 4-46] Length = 351 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 242/317 (76%), Positives = 274/317 (86%) Query: 23 DTTIKFTLGWKTQGSDAAFFYAKDNGYFKEEGLNVVIDQGEGSGATVTRIMSGAYDAGFG 82 DTTIKFTLGWKTQGSDAAFF A+D GYFKEEGL+VVIDQGEGSGATVTRIM GAYDAGFG Sbjct: 33 DTTIKFTLGWKTQGSDAAFFLARDKGYFKEEGLSVVIDQGEGSGATVTRIMGGAYDAGFG 92 Query: 83 DVNAIIQNAATKPQDAPVMVYMMWNQPPFAIVAKNSSGIKTIKDFEGHTLGGAQGTPTTR 142 D+NAIIQNAAT+P DAPVMVYM+WNQPPFAIV+K +SGI+ KD EG TLGGAQGTPTTR Sbjct: 93 DMNAIIQNAATRPADAPVMVYMLWNQPPFAIVSKAASGIRGPKDLEGRTLGGAQGTPTTR 152 Query: 143 LLPVFVHKNGLDGEKIKVSNMAPNLQEPMLIKGDIDAALVFNITSYFNVVLNRQDPDKDF 202 +LPVF NGLD +IKVSNMAPNLQEPML++G IDAALVF ITSYFN+VLNRQDPDKDF Sbjct: 153 MLPVFAKTNGLDLARIKVSNMAPNLQEPMLLQGQIDAALVFTITSYFNLVLNRQDPDKDF 212 Query: 203 KWFSFGDYGLDLYSNGVMVSRKLIASNPKAVAGLVRAINRGAIAVAKDQNAAMKAALNYD 262 W SFGD+GLDLYSNGVMVSRKL+ NPKAVAGLVRAINR + + +DQ+ M+A + +D Sbjct: 213 NWISFGDHGLDLYSNGVMVSRKLLKENPKAVAGLVRAINRAVVEIGRDQDLGMQAVVAFD 272 Query: 263 NLINVDVEKRRLQYSFEKLIVSPEMKDIGIGDVRDDRMARAIGFIVEGYQLARTPAPAEV 322 NL+N VEKRRLQ+S+E LIVSPEM++IG+GD++DDR+ARAI + GY L R P PAEV Sbjct: 273 NLVNAAVEKRRLQFSYETLIVSPEMREIGVGDLKDDRLARAIALVAAGYDLPRRPEPAEV 332 Query: 323 FSREFLPPRAERELVYT 339 FSR FLPPRAER L Y Sbjct: 333 FSRGFLPPRAERSLDYV 349 >ref|ZP_00963414.1| hypothetical protein NAS141_15818 [Sulfitobacter sp. NAS-14.1] gb|EAP80158.1| hypothetical protein NAS141_15818 [Sulfitobacter sp. NAS-14.1] Length = 341 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 202/332 (60%), Positives = 259/332 (78%), Gaps = 2/332 (0%) Query: 12 LALIAG--PARAEDTTIKFTLGWKTQGSDAAFFYAKDNGYFKEEGLNVVIDQGEGSGATV 69 LAL+AG P AE T I+FTLGWKTQGSDA F A D GYF++EGLNV IDQGEGS ATV Sbjct: 10 LALMAGAAPVFAEMTDIRFTLGWKTQGSDAPFLLALDKGYFEDEGLNVSIDQGEGSAATV 69 Query: 70 TRIMSGAYDAGFGDVNAIIQNAATKPQDAPVMVYMMWNQPPFAIVAKNSSGIKTIKDFEG 129 TRIM GAYDAGFGD+NAIIQNAA +P +APVMVY +WN+PPFAIV ++GI+ +DFEG Sbjct: 70 TRIMGGAYDAGFGDINAIIQNAAARPGEAPVMVYQLWNRPPFAIVTPKTAGIENPEDFEG 129 Query: 130 HTLGGAQGTPTTRLLPVFVHKNGLDGEKIKVSNMAPNLQEPMLIKGDIDAALVFNITSYF 189 TLGGAQGTPTTRL PVF NG+D +K+ NMAPNLQEPMLI+GDID A VF TS+F Sbjct: 130 KTLGGAQGTPTTRLFPVFAEINGIDLDKVAQENMAPNLQEPMLIRGDIDGAFVFTSTSWF 189 Query: 190 NVVLNRQDPDKDFKWFSFGDYGLDLYSNGVMVSRKLIASNPKAVAGLVRAINRGAIAVAK 249 N++ NRQDP D+ WF+F DYG+DLYSNG+MVSR+L+A NP+AVAGLVRA+N+ + V+ Sbjct: 190 NLIANRQDPANDYTWFNFEDYGMDLYSNGMMVSRELLAENPEAVAGLVRAVNKATMEVSA 249 Query: 250 DQNAAMKAALNYDNLINVDVEKRRLQYSFEKLIVSPEMKDIGIGDVRDDRMARAIGFIVE 309 +Q+++++A + YDNL++ D+E+ RL+++ L+ +PE+ DIG+GD+ D+R+ R+I + + Sbjct: 250 NQDSSIEAIMAYDNLVDADLERARLEFALTNLMNAPEVTDIGMGDLVDERLTRSIEIVAK 309 Query: 310 GYQLARTPAPAEVFSREFLPPRAERELVYTAN 341 GY L R P +E+F R FLPP ER T N Sbjct: 310 GYDLERLPEASEIFDRSFLPPVDERRFETTIN 341 >ref|ZP_05102193.1| Tat pathway signal sequence domain protein [Roseobacter sp. GAI101] gb|EEB86495.1| Tat pathway signal sequence domain protein [Roseobacter sp. GAI101] Length = 341 Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust. Identities = 202/330 (61%), Positives = 255/330 (77%), Gaps = 2/330 (0%) Query: 12 LALIAG--PARAEDTTIKFTLGWKTQGSDAAFFYAKDNGYFKEEGLNVVIDQGEGSGATV 69 ALIAG PA AE T I+FTLGWKTQGSDA F A GYF++EGLNV IDQGEGS ATV Sbjct: 10 FALIAGITPAFAEMTDIRFTLGWKTQGSDAPFLMALSRGYFEDEGLNVTIDQGEGSAATV 69 Query: 70 TRIMSGAYDAGFGDVNAIIQNAATKPQDAPVMVYMMWNQPPFAIVAKNSSGIKTIKDFEG 129 TRIM GAYDAGFGD+NAIIQNAA +P +APVMVY +WN+PPFAIV S+GI+T DFEG Sbjct: 70 TRIMGGAYDAGFGDINAIIQNAAARPGEAPVMVYQLWNRPPFAIVTPKSAGIETPADFEG 129 Query: 130 HTLGGAQGTPTTRLLPVFVHKNGLDGEKIKVSNMAPNLQEPMLIKGDIDAALVFNITSYF 189 LGGAQGTPTTRL PVF NG+D +K+ NMAPNLQEPM+I+GDID A VF ITS+F Sbjct: 130 KRLGGAQGTPTTRLFPVFAKLNGVDIDKVAQENMAPNLQEPMMIRGDIDGAFVFTITSWF 189 Query: 190 NVVLNRQDPDKDFKWFSFGDYGLDLYSNGVMVSRKLIASNPKAVAGLVRAINRGAIAVAK 249 N++ NRQDP DF WF F DYG+DLYSNG+MVSRK++A NP+AV+GLVRA+NR + +A+ Sbjct: 190 NLIANRQDPAADFNWFQFEDYGMDLYSNGMMVSRKMLAENPEAVSGLVRAVNRATLEIAQ 249 Query: 250 DQNAAMKAALNYDNLINVDVEKRRLQYSFEKLIVSPEMKDIGIGDVRDDRMARAIGFIVE 309 DQ+ A++A + +DNL++ ++E+ RL+++ L+ +PE +IG+GD+ D+R+ R+I + E Sbjct: 250 DQDIAVEAIMAFDNLVDPELERARLEFALTNLMNAPETAEIGMGDLVDERLTRSIAIVAE 309 Query: 310 GYQLARTPAPAEVFSREFLPPRAERELVYT 339 GY L R P +E+F R FLPP R V + Sbjct: 310 GYGLERLPEASEIFDRSFLPPADTRSFVVS 339 >ref|ZP_01035704.1| ABC transporter, periplasmic substrate binding protein [Roseovarius sp. 217] gb|EAQ25869.1| ABC transporter, periplasmic substrate binding protein [Roseovarius sp. 217] Length = 342 Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust. Identities = 204/333 (61%), Positives = 249/333 (74%), Gaps = 2/333 (0%) Query: 4 KVSAALLGLALIAG--PARAEDTTIKFTLGWKTQGSDAAFFYAKDNGYFKEEGLNVVIDQ 61 K++ LAL+ G PA AE T I+FTLGWKTQGSDA F A GYF EEGL V IDQ Sbjct: 2 KIAVFSAALALLTGLSPAWAETTDIRFTLGWKTQGSDAPFLLALSKGYFAEEGLTVTIDQ 61 Query: 62 GEGSGATVTRIMSGAYDAGFGDVNAIIQNAATKPQDAPVMVYMMWNQPPFAIVAKNSSGI 121 GEGS ATVTRIM GAYDAGFGD+NAIIQNAA +P +APVMVY +WN+PPFAIV +SGI Sbjct: 62 GEGSAATVTRIMGGAYDAGFGDINAIIQNAAQRPGEAPVMVYQLWNRPPFAIVTPKTSGI 121 Query: 122 KTIKDFEGHTLGGAQGTPTTRLLPVFVHKNGLDGEKIKVSNMAPNLQEPMLIKGDIDAAL 181 +T DF G LGGAQGTPTTRL PVF NG+D + NMAPNLQEPMLI+GDID A Sbjct: 122 ETPADFVGRKLGGAQGTPTTRLFPVFAELNGIDLASVAQENMAPNLQEPMLIRGDIDGAF 181 Query: 182 VFNITSYFNVVLNRQDPDKDFKWFSFGDYGLDLYSNGVMVSRKLIASNPKAVAGLVRAIN 241 VF ITS+FN++ NRQDP D+ WF F DYG+DLYSNG+MVSR L+A NP+AVAGLVRA+N Sbjct: 182 VFTITSWFNLIANRQDPANDYNWFKFEDYGMDLYSNGLMVSRALLADNPEAVAGLVRAVN 241 Query: 242 RGAIAVAKDQNAAMKAALNYDNLINVDVEKRRLQYSFEKLIVSPEMKDIGIGDVRDDRMA 301 R + +AKDQ+AAM+A + +DNL++ D E+ RL ++ L+ +PE IG+GD+ D+R+ Sbjct: 242 RATLEIAKDQDAAMEAVMAFDNLVDQDNERARLNFALTNLMNAPETDSIGMGDLVDERLT 301 Query: 302 RAIGFIVEGYQLARTPAPAEVFSREFLPPRAER 334 R+I + +GY L R P +E+F R FLPP ER Sbjct: 302 RSIEIVAKGYGLERLPEASEIFDRSFLPPVGER 334 >ref|YP_004692193.1| NMT1/THI5 family protein [Roseobacter litoralis Och 149] gb|AEI95230.1| putative NMT1/THI5 family protein [Roseobacter litoralis Och 149] Length = 341 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 200/341 (58%), Positives = 258/341 (75%) Query: 1 MLRKVSAALLGLALIAGPARAEDTTIKFTLGWKTQGSDAAFFYAKDNGYFKEEGLNVVID 60 M + A L L + A PA A+ T I+FTLGWKTQGSDA F A + GYF++EGLNV ID Sbjct: 1 MKHSLFGAALTLMVGAVPALADMTDIRFTLGWKTQGSDAPFLLALNKGYFEDEGLNVTID 60 Query: 61 QGEGSGATVTRIMSGAYDAGFGDVNAIIQNAATKPQDAPVMVYMMWNQPPFAIVAKNSSG 120 QGEGS ATVTRIM GAYDAGFGD+NAIIQNAA +P +APVMVY +WN+PPFAIV ++G Sbjct: 61 QGEGSAATVTRIMGGAYDAGFGDINAIIQNAAARPGEAPVMVYQLWNRPPFAIVTPKTAG 120 Query: 121 IKTIKDFEGHTLGGAQGTPTTRLLPVFVHKNGLDGEKIKVSNMAPNLQEPMLIKGDIDAA 180 I+T DFEG TLGGAQGTPTTRL PVF NG+D E + +MAPNLQEPM+I+GDID A Sbjct: 121 IETPADFEGKTLGGAQGTPTTRLFPVFAELNGIDLELVSQESMAPNLQEPMMIRGDIDGA 180 Query: 181 LVFNITSYFNVVLNRQDPDKDFKWFSFGDYGLDLYSNGVMVSRKLIASNPKAVAGLVRAI 240 VF TS+FN++ NRQDP D+ WF+F DYG+DLYSNG+MVSRKL+A NP+AVAGLVRA+ Sbjct: 181 FVFTSTSWFNLIANRQDPANDYNWFNFEDYGMDLYSNGMMVSRKLMAENPEAVAGLVRAV 240 Query: 241 NRGAIAVAKDQNAAMKAALNYDNLINVDVEKRRLQYSFEKLIVSPEMKDIGIGDVRDDRM 300 N+ + VA +Q+++++A + +DNLIN ++E RL+++ L+ +PE+ +IG+GD+ D+R+ Sbjct: 241 NKATMEVAANQDSSVEAIMAFDNLINPELELARLEFALTNLMNAPEVTEIGMGDLVDERL 300 Query: 301 ARAIGFIVEGYQLARTPAPAEVFSREFLPPRAERELVYTAN 341 R+I + +GY L R P +E+F R FLPP R T N Sbjct: 301 TRSIEIVAKGYDLDRLPEASEIFDRSFLPPVDARAFEVTLN 341