BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0092.0006.p (216 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_576796.1| putative hydroxylase [Nitrobacter hamburgensis ... 399 e-109 ref|YP_002289699.1| pkhd-type hydroxylase [Oligotropha carboxido... 395 e-108 ref|NP_770545.1| hydroxylase [Bradyrhizobium japonicum USDA 110]... 393 e-107 ref|ZP_07028102.1| 2OG-Fe(II) oxygenase [Afipia sp. 1NLS2] >gi|2... 392 e-107 ref|YP_570459.1| putative hydroxylase [Rhodopseudomonas palustri... 384 e-105 >ref|YP_576796.1| putative hydroxylase [Nitrobacter hamburgensis X14] sp|Q1QN61.1|Y1514_NITHX RecName: Full=PKHD-type hydroxylase Nham_1514 gb|ABE62336.1| 2OG-Fe(II) oxygenase [Nitrobacter hamburgensis X14] Length = 229 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 189/216 (87%), Positives = 208/216 (96%) Query: 1 VADFRRIMEQAEWEDGRSTAGAASAMVKRNEQLPPDSEVARQLGTRILSALSASPRFISA 60 VADFRRIM+ AEWEDGRSTAGA SA+VKRNEQLPPD ++AR LG RI+SAL+A+PRFISA Sbjct: 14 VADFRRIMDAAEWEDGRSTAGAQSALVKRNEQLPPDGDLARTLGNRIISALTANPRFISA 73 Query: 61 AIPLRIFPPLFNRYAASDGHHFGLHVDNAVRGDRLTGMRIRTDLSVTLFLSEPEDYDGGE 120 AIPL+IFPPLFNRY ASDGHHFG+HVDNAVRGDR+TG+RIRTDLSVTLFLSEP+DYDGG+ Sbjct: 74 AIPLQIFPPLFNRYVASDGHHFGVHVDNAVRGDRMTGLRIRTDLSVTLFLSEPDDYDGGD 133 Query: 121 LVIEDLYGSHEIKLPAGDLVVYPASSLHLVTPVTRGTRVASFFWLQSMVRDAHARSLIFD 180 LV+ED YGSHE+KLPAGDLV+YPASSLHLVTPVTRGTRVASFFWLQSMVRD HARS+IFD Sbjct: 134 LVVEDNYGSHEVKLPAGDLVLYPASSLHLVTPVTRGTRVASFFWLQSMVRDDHARSMIFD 193 Query: 181 LDTAIQALVERLGRDDPETVKLTGIYHNLIRHWAEV 216 LDTAIQ+LVERLGRDDPETVKLTGIYHNLIR+WAEV Sbjct: 194 LDTAIQSLVERLGRDDPETVKLTGIYHNLIRYWAEV 229 >ref|YP_002289699.1| pkhd-type hydroxylase [Oligotropha carboxidovorans OM5] ref|YP_004632304.1| PKHD-type hydroxylase [Oligotropha carboxidovorans OM5] sp|B6JGF2.1|Y6723_OLICO RecName: Full=PKHD-type hydroxylase OCAR_6723 gb|ACI93834.1| pkhd-type hydroxylase [Oligotropha carboxidovorans OM5] gb|AEI02487.1| PKHD-type hydroxylase [Oligotropha carboxidovorans OM4] gb|AEI06063.1| PKHD-type hydroxylase [Oligotropha carboxidovorans OM5] Length = 229 Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust. Identities = 189/216 (87%), Positives = 205/216 (94%) Query: 1 VADFRRIMEQAEWEDGRSTAGAASAMVKRNEQLPPDSEVARQLGTRILSALSASPRFISA 60 VADFRR+M+ AEWEDGRSTAGA SAMVKRNEQLPPDS+VAR LG R+LSAL+ SP FISA Sbjct: 14 VADFRRVMDAAEWEDGRSTAGAQSAMVKRNEQLPPDSDVARALGQRVLSALTRSPLFISA 73 Query: 61 AIPLRIFPPLFNRYAASDGHHFGLHVDNAVRGDRLTGMRIRTDLSVTLFLSEPEDYDGGE 120 AIPL IFPPLFNRYA+S+GHHFG+HVDNAVRGDRLTG+RIRTDLSVTLFLSEPEDYDGG Sbjct: 74 AIPLHIFPPLFNRYASSNGHHFGVHVDNAVRGDRLTGLRIRTDLSVTLFLSEPEDYDGGV 133 Query: 121 LVIEDLYGSHEIKLPAGDLVVYPASSLHLVTPVTRGTRVASFFWLQSMVRDAHARSLIFD 180 L +ED YGSHE+KLPAG LV+YPASSLHLVTPVTRGTRVASFFWLQSMVRDAHARS+IFD Sbjct: 134 LTVEDYYGSHEVKLPAGHLVLYPASSLHLVTPVTRGTRVASFFWLQSMVRDAHARSMIFD 193 Query: 181 LDTAIQALVERLGRDDPETVKLTGIYHNLIRHWAEV 216 LDTA+QALVERLGRDDPETVKLTGIYHNLIR+WA+V Sbjct: 194 LDTAVQALVERLGRDDPETVKLTGIYHNLIRYWADV 229 >ref|NP_770545.1| hydroxylase [Bradyrhizobium japonicum USDA 110] sp|Q89ND7.1|Y3905_BRAJA RecName: Full=PKHD-type hydroxylase blr3905 dbj|BAC49170.1| blr3905 [Bradyrhizobium japonicum USDA 110] Length = 229 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 183/216 (84%), Positives = 206/216 (95%) Query: 1 VADFRRIMEQAEWEDGRSTAGAASAMVKRNEQLPPDSEVARQLGTRILSALSASPRFISA 60 VADFRRIM+ + WEDGRSTAG+ SAMVKRNEQLPPDSEVAR+LG RI+SAL+++PRFI+A Sbjct: 14 VADFRRIMDASAWEDGRSTAGSQSAMVKRNEQLPPDSEVARKLGNRIISALTSNPRFIAA 73 Query: 61 AIPLRIFPPLFNRYAASDGHHFGLHVDNAVRGDRLTGMRIRTDLSVTLFLSEPEDYDGGE 120 AIPL+IFPPLFNRYAA+ GHHFGLHVDNA+RGDRLTG+RIRTDLSVTLFL+EP++YDGGE Sbjct: 74 AIPLQIFPPLFNRYAATSGHHFGLHVDNAIRGDRLTGLRIRTDLSVTLFLAEPDEYDGGE 133 Query: 121 LVIEDLYGSHEIKLPAGDLVVYPASSLHLVTPVTRGTRVASFFWLQSMVRDAHARSLIFD 180 LVIED YGSHE+KLPAGD V+YP++SLHLVTPVTRG RVASFFWLQSM+RD ARS+IFD Sbjct: 134 LVIEDTYGSHEVKLPAGDCVLYPSTSLHLVTPVTRGARVASFFWLQSMIRDDQARSMIFD 193 Query: 181 LDTAIQALVERLGRDDPETVKLTGIYHNLIRHWAEV 216 LDTAIQALVERLGRDDPETVKLTGIYHNLIR+WAEV Sbjct: 194 LDTAIQALVERLGRDDPETVKLTGIYHNLIRYWAEV 229 >ref|ZP_07028102.1| 2OG-Fe(II) oxygenase [Afipia sp. 1NLS2] gb|EFI50923.1| 2OG-Fe(II) oxygenase [Afipia sp. 1NLS2] Length = 247 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 188/216 (87%), Positives = 202/216 (93%) Query: 1 VADFRRIMEQAEWEDGRSTAGAASAMVKRNEQLPPDSEVARQLGTRILSALSASPRFISA 60 VADFRRIM+ EWEDGRSTAGA SAMVKRNEQLPPDSE AR LG R+LSAL+ +P FISA Sbjct: 32 VADFRRIMDATEWEDGRSTAGAQSAMVKRNEQLPPDSETARVLGQRVLSALTKNPLFISA 91 Query: 61 AIPLRIFPPLFNRYAASDGHHFGLHVDNAVRGDRLTGMRIRTDLSVTLFLSEPEDYDGGE 120 AIPL IFPPLFNRYAASDGHHFG+HVDNAVRGDRLTG+RIRTDLSVTLFLSEPEDY+GG Sbjct: 92 AIPLHIFPPLFNRYAASDGHHFGVHVDNAVRGDRLTGLRIRTDLSVTLFLSEPEDYEGGV 151 Query: 121 LVIEDLYGSHEIKLPAGDLVVYPASSLHLVTPVTRGTRVASFFWLQSMVRDAHARSLIFD 180 L +ED YGSHE+KLPAG LV+YPASSLHLVTPVTRGTRVASFFWLQSMVRDAHARS+IFD Sbjct: 152 LTVEDYYGSHEVKLPAGHLVLYPASSLHLVTPVTRGTRVASFFWLQSMVRDAHARSMIFD 211 Query: 181 LDTAIQALVERLGRDDPETVKLTGIYHNLIRHWAEV 216 LD A+QALVERLGRDDPETVKLTGIYHNLIR+WA+V Sbjct: 212 LDMAVQALVERLGRDDPETVKLTGIYHNLIRYWADV 247 >ref|YP_570459.1| putative hydroxylase [Rhodopseudomonas palustris BisB5] sp|Q134D1.1|Y3334_RHOPS RecName: Full=PKHD-type hydroxylase RPD_3334 gb|ABE40558.1| 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris BisB5] Length = 229 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 178/216 (82%), Positives = 205/216 (94%) Query: 1 VADFRRIMEQAEWEDGRSTAGAASAMVKRNEQLPPDSEVARQLGTRILSALSASPRFISA 60 V +FRR+M+QA+WEDGRSTAGA SAMVKRNEQLPPDSE+AR LG RI+SAL+A+P+F+SA Sbjct: 14 VTEFRRLMDQADWEDGRSTAGAQSAMVKRNEQLPPDSELARMLGRRIVSALTANPKFVSA 73 Query: 61 AIPLRIFPPLFNRYAASDGHHFGLHVDNAVRGDRLTGMRIRTDLSVTLFLSEPEDYDGGE 120 A+PL+IFPPLFNRYAAS HHFG+HVDNAVRGD LTG+RIRTDLSVTLFL+EP++YDGGE Sbjct: 74 AVPLQIFPPLFNRYAASGNHHFGIHVDNAVRGDPLTGLRIRTDLSVTLFLAEPDEYDGGE 133 Query: 121 LVIEDLYGSHEIKLPAGDLVVYPASSLHLVTPVTRGTRVASFFWLQSMVRDAHARSLIFD 180 LV+ED YGSHE+KLPAGD V+YP+SSLH+VTPVTRG RVASFFWLQSM+RDAHARS+I+D Sbjct: 134 LVVEDTYGSHEVKLPAGDCVLYPSSSLHMVTPVTRGARVASFFWLQSMIRDAHARSMIYD 193 Query: 181 LDTAIQALVERLGRDDPETVKLTGIYHNLIRHWAEV 216 LD AIQALVERLGRDDPETVKLTGIYHNLIR+WA+V Sbjct: 194 LDGAIQALVERLGRDDPETVKLTGIYHNLIRYWADV 229