BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0092.0004.p         (79 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002289701.1| hypothetical protein OCAR_6725 [Oligotropha ...   136   1e-30
ref|ZP_07028100.1| conserved hypothetical protein [Afipia sp. 1N...   135   2e-30
ref|YP_001206604.1| hypothetical protein BRADO4654 [Bradyrhizobi...   134   4e-30
ref|YP_001239538.1| hypothetical protein BBta_3539 [Bradyrhizobi...   133   8e-30
ref|YP_576794.1| hypothetical protein Nham_1512 [Nitrobacter ham...   130   6e-29

>ref|YP_002289701.1| hypothetical protein OCAR_6725 [Oligotropha carboxidovorans OM5]
 ref|YP_004632302.1| hypothetical protein OCA5_c13450 [Oligotropha carboxidovorans
          OM5]
 gb|ACI93836.1| conserved hypothetical protein [Oligotropha carboxidovorans OM5]
 gb|AEI02485.1| hypothetical protein OCA4_c13450 [Oligotropha carboxidovorans
          OM4]
 gb|AEI06061.1| hypothetical protein OCA5_c13450 [Oligotropha carboxidovorans
          OM5]
          Length = 87

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 62/77 (80%), Positives = 72/77 (93%)

Query: 1  MDELNGRMMACQILVTGLIARVANEQRDPLRFLTDFRDEIKAVVNGVNIAGLENSDSVRQ 60
          M+ELNGRM+ACQIL+TGLIARVANEQRDPLRFLTDFRDEI+AVV GVNIAG  N+D++R+
Sbjct: 1  MEELNGRMIACQILITGLIARVANEQRDPLRFLTDFRDEIRAVVRGVNIAGTPNADAIRR 60

Query: 61 VAQRTIDELFSLMKPPS 77
           AQ T+DE+FSLMKPPS
Sbjct: 61 TAQETVDEMFSLMKPPS 77


>ref|ZP_07028100.1| conserved hypothetical protein [Afipia sp. 1NLS2]
 gb|EFI50921.1| conserved hypothetical protein [Afipia sp. 1NLS2]
          Length = 86

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/77 (80%), Positives = 73/77 (94%)

Query: 1  MDELNGRMMACQILVTGLIARVANEQRDPLRFLTDFRDEIKAVVNGVNIAGLENSDSVRQ 60
          M+ELNGRM+ACQIL+TGLIARVAN+QRDPLRFLTDFRDEI+AVV G+NIAG  N+DSVR 
Sbjct: 1  MEELNGRMIACQILITGLIARVANDQRDPLRFLTDFRDEIRAVVRGINIAGTPNADSVRL 60

Query: 61 VAQRTIDELFSLMKPPS 77
          VA++T+DE+FSLMKPPS
Sbjct: 61 VAEKTVDEMFSLMKPPS 77


>ref|YP_001206604.1| hypothetical protein BRADO4654 [Bradyrhizobium sp. ORS 278]
 emb|CAL78386.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 86

 Score =  134 bits (338), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 62/79 (78%), Positives = 76/79 (96%)

Query: 1  MDELNGRMMACQILVTGLIARVANEQRDPLRFLTDFRDEIKAVVNGVNIAGLENSDSVRQ 60
          M+ELNG+M+ACQILVTGLIARVANEQRDPLRFLTDFRDEI+AVVNGV IAG+++S+ VR+
Sbjct: 1  MEELNGKMLACQILVTGLIARVANEQRDPLRFLTDFRDEIRAVVNGVRIAGIDDSERVRR 60

Query: 61 VAQRTIDELFSLMKPPSAE 79
          +A +T+DELFSLMKPPS++
Sbjct: 61 IAVQTVDELFSLMKPPSSD 79


>ref|YP_001239538.1| hypothetical protein BBta_3539 [Bradyrhizobium sp. BTAi1]
 gb|ABQ35632.1| hypothetical protein BBta_3539 [Bradyrhizobium sp. BTAi1]
          Length = 86

 Score =  133 bits (335), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 61/79 (77%), Positives = 74/79 (93%)

Query: 1  MDELNGRMMACQILVTGLIARVANEQRDPLRFLTDFRDEIKAVVNGVNIAGLENSDSVRQ 60
          M+ELNG+M+ACQILVTGLIARVANEQRDPLRFLTDFRDEI+AVV GV IAG+++S+ VR 
Sbjct: 1  MEELNGKMLACQILVTGLIARVANEQRDPLRFLTDFRDEIRAVVKGVRIAGIDDSERVRH 60

Query: 61 VAQRTIDELFSLMKPPSAE 79
          +A +T+DELFSLMKPPS++
Sbjct: 61 IAVQTVDELFSLMKPPSSD 79


>ref|YP_576794.1| hypothetical protein Nham_1512 [Nitrobacter hamburgensis X14]
 gb|ABE62334.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 79

 Score =  130 bits (327), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 60/79 (75%), Positives = 70/79 (88%)

Query: 1  MDELNGRMMACQILVTGLIARVANEQRDPLRFLTDFRDEIKAVVNGVNIAGLENSDSVRQ 60
          MDELNGRMMACQI++TGLIARVAN   DPLRFLTDFRDEIKAVV  VNIAG +++D +R 
Sbjct: 1  MDELNGRMMACQIMITGLIARVANSSPDPLRFLTDFRDEIKAVVRQVNIAGTDDTDRIRS 60

Query: 61 VAQRTIDELFSLMKPPSAE 79
          VAQ+T+DE+ SLMKPPSA+
Sbjct: 61 VAQKTVDEMLSLMKPPSAD 79