BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0092.0002.p (389 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001206606.1| putative component of multidrug efflux pump,... 591 e-167 ref|YP_001239536.1| putative component of multidrug efflux pump,... 588 e-166 ref|NP_770543.1| multidrug resistance protein [Bradyrhizobium ja... 567 e-159 ref|YP_576792.1| secretion protein HlyD [Nitrobacter hamburgensi... 552 e-155 ref|YP_317879.1| secretion protein HlyD [Nitrobacter winogradsky... 535 e-150 >ref|YP_001206606.1| putative component of multidrug efflux pump, mdtA-like [Bradyrhizobium sp. ORS 278] emb|CAL78388.1| Putative component of multidrug efflux pump, mdtA-Like [Bradyrhizobium sp. ORS 278] Length = 393 Score = 591 bits (1524), Expect = e-167, Method: Compositional matrix adjust. Identities = 289/389 (74%), Positives = 333/389 (85%) Query: 1 MSKSRTIGWVLVIAAVGAAGYFGWQKHTSNQQAAEAAQKRSAQRPAVPVKISPVEKADFP 60 M SRTI W+L++AA+G AGY+GWQ+ + A + A ++SA+ PAV V +PVEK DFP Sbjct: 5 MKASRTITWILLVAALGGAGYYGWQRTQDAEAAKKTAAQKSARPPAVRVSTAPVEKIDFP 64 Query: 61 VYLTGLGTVQAFNTVQVRTRVDGQITRIAFKEGQFVKAGDTLVEIDPRPYQATLDQAKAK 120 V+LTGLGTVQ FNTVQVRTRVDGQI +IAF EGQ V GD LVEIDPRP+QA LDQAKAK Sbjct: 65 VFLTGLGTVQGFNTVQVRTRVDGQIDKIAFTEGQLVNEGDLLVEIDPRPFQAALDQAKAK 124 Query: 121 KAQDEANLANANLDLQRYTKLGEFATRQQLDTQRSTVAQLTAQISADEAAIFNAQTQVDY 180 KAQDEANLANANLDLQRYTKLGEFATRQQ DTQR+TVAQLTAQISAD+AAI NAQTQ+ Y Sbjct: 125 KAQDEANLANANLDLQRYTKLGEFATRQQQDTQRATVAQLTAQISADDAAIANAQTQLSY 184 Query: 181 TTVKSPIDGIVGLRLVDIGNIVNASAQTGIVTITQIEPITVIFTAPEDQLPDIKAALAVA 240 T VKSPI G+ GLR VDIGNIVNAS+QTGIV+I QIEPI VIFTAPE+QLP I A A Sbjct: 185 TQVKSPISGVAGLRQVDIGNIVNASSQTGIVSIAQIEPIAVIFTAPEEQLPYINEAQKTA 244 Query: 241 PPKTIALTTDGKRVLSTGTLALINNQVDTSSGTVRLKAVFDNKDHALWPGQSVSTRLLVR 300 P K IALTTDGK+ L+ G L ++NNQVDTSSGT+RLKAVFDNK+H LWPGQSVSTRLLVR Sbjct: 245 PLKVIALTTDGKKQLAEGKLMVVNNQVDTSSGTIRLKAVFDNKEHVLWPGQSVSTRLLVR 304 Query: 301 TLKDATVVPDDAVQHGTDGLYAYSVNQENKAELRKIKVSQSIDGKSVIDEGLSPGQQVIT 360 TLKDATVVPDDAVQH T GLY+Y+V+ E+KAELRK+KV SIDG++VI+EGL+PGQQVIT Sbjct: 305 TLKDATVVPDDAVQHSTSGLYSYTVSPESKAELRKVKVGASIDGRTVIEEGLTPGQQVIT 364 Query: 361 AGQYKVSPGTLVTTAVASSDPSQSKVAQE 389 GQ+KV PG++VTTAVAS++P+ +KV QE Sbjct: 365 GGQFKVQPGSVVTTAVASTEPAAAKVRQE 393 >ref|YP_001239536.1| putative component of multidrug efflux pump, mdtA-like protein [Bradyrhizobium sp. BTAi1] gb|ABQ35630.1| Putative component of multidrug efflux pump, mdtA-like protein [Bradyrhizobium sp. BTAi1] Length = 389 Score = 588 bits (1516), Expect = e-166, Method: Compositional matrix adjust. Identities = 287/389 (73%), Positives = 332/389 (85%) Query: 1 MSKSRTIGWVLVIAAVGAAGYFGWQKHTSNQQAAEAAQKRSAQRPAVPVKISPVEKADFP 60 M SRTI W+L++AAVG AGY+GWQ++ + A + + ++SA+ PAV V +PVE+ DFP Sbjct: 1 MKTSRTIVWILLVAAVGGAGYYGWQRYQDAESAKKTSAQKSARPPAVRVSTAPVERIDFP 60 Query: 61 VYLTGLGTVQAFNTVQVRTRVDGQITRIAFKEGQFVKAGDTLVEIDPRPYQATLDQAKAK 120 V+LTGLGTVQ FNTVQVRTRVDGQI +I F EGQ VK GD LVEIDPRP+QA LDQAKAK Sbjct: 61 VFLTGLGTVQGFNTVQVRTRVDGQIDKIGFTEGQLVKEGDLLVEIDPRPFQAALDQAKAK 120 Query: 121 KAQDEANLANANLDLQRYTKLGEFATRQQLDTQRSTVAQLTAQISADEAAIFNAQTQVDY 180 +AQDEANL NANLDLQRYTKLGEFATRQQ DTQR+TVAQLTAQISADEAAI NAQTQ+ Y Sbjct: 121 RAQDEANLNNANLDLQRYTKLGEFATRQQTDTQRATVAQLTAQISADEAAIANAQTQLSY 180 Query: 181 TTVKSPIDGIVGLRLVDIGNIVNASAQTGIVTITQIEPITVIFTAPEDQLPDIKAALAVA 240 T VK+PI G+ GLR VDIGNIVNAS+QTGIV+I QIEPI VIFTAPE +LP I A VA Sbjct: 181 TQVKAPISGVAGLRQVDIGNIVNASSQTGIVSIAQIEPIAVIFTAPEGELPYINEAQKVA 240 Query: 241 PPKTIALTTDGKRVLSTGTLALINNQVDTSSGTVRLKAVFDNKDHALWPGQSVSTRLLVR 300 P K IA TTDGK+ L+ G L ++NNQVDTSSGT+RLKAVFDNKDHALWPGQSVSTRLLVR Sbjct: 241 PLKVIAFTTDGKKQLAEGKLMVVNNQVDTSSGTIRLKAVFDNKDHALWPGQSVSTRLLVR 300 Query: 301 TLKDATVVPDDAVQHGTDGLYAYSVNQENKAELRKIKVSQSIDGKSVIDEGLSPGQQVIT 360 TLKDATVVPDDAVQH T GLY+Y+V+ +NKAELRK+KV SIDG++VI+EGL+PGQQVIT Sbjct: 301 TLKDATVVPDDAVQHSTSGLYSYTVSPDNKAELRKVKVGASIDGRTVIEEGLTPGQQVIT 360 Query: 361 AGQYKVSPGTLVTTAVASSDPSQSKVAQE 389 GQ+KV PG++VTTAVASS+ + +KV QE Sbjct: 361 GGQFKVQPGSVVTTAVASSEQAPAKVRQE 389 >ref|NP_770543.1| multidrug resistance protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49168.1| bll3903 [Bradyrhizobium japonicum USDA 110] Length = 400 Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust. Identities = 288/390 (73%), Positives = 331/390 (84%), Gaps = 1/390 (0%) Query: 1 MSKSRTIGWVLVIAAVGAAGYFGWQKHTS-NQQAAEAAQKRSAQRPAVPVKISPVEKADF 59 M K+R I W+L+IAAV +AGY+GWQK S N + AQK + PAVPV ++PV+K DF Sbjct: 11 MKKTRPILWILIIAAVASAGYYGWQKFGSPNAGKTQTAQKGPPRAPAVPVSVAPVQKVDF 70 Query: 60 PVYLTGLGTVQAFNTVQVRTRVDGQITRIAFKEGQFVKAGDTLVEIDPRPYQATLDQAKA 119 PVYLTGLGTVQ FNTVQVR RVDGQI RIAF EGQ VK G+ LV IDPRPYQA LDQAKA Sbjct: 71 PVYLTGLGTVQGFNTVQVRPRVDGQIDRIAFTEGQIVKEGELLVSIDPRPYQAALDQAKA 130 Query: 120 KKAQDEANLANANLDLQRYTKLGEFATRQQLDTQRSTVAQLTAQISADEAAIFNAQTQVD 179 KKAQDEANLANANL+LQR KLGEFAT Q++DTQRSTVAQLTAQI+AD+AAI NAQTQ+D Sbjct: 131 KKAQDEANLANANLELQRAMKLGEFATAQRVDTQRSTVAQLTAQIAADDAAISNAQTQLD 190 Query: 180 YTTVKSPIDGIVGLRLVDIGNIVNASAQTGIVTITQIEPITVIFTAPEDQLPDIKAALAV 239 YT +K+PI G+ GLR VD+GNIVNAS QTGIVTI+Q+EPI+VIFTAPEDQL I Sbjct: 191 YTQIKAPITGVAGLRQVDVGNIVNASTQTGIVTISQVEPISVIFTAPEDQLAYISEGQKA 250 Query: 240 APPKTIALTTDGKRVLSTGTLALINNQVDTSSGTVRLKAVFDNKDHALWPGQSVSTRLLV 299 K IA TTDGK+ L+ G LA+INNQVDT+SGT+RLKAVFDNKDH LWPGQSVSTRLLV Sbjct: 251 GALKVIAFTTDGKKTLAEGKLAVINNQVDTTSGTIRLKAVFDNKDHTLWPGQSVSTRLLV 310 Query: 300 RTLKDATVVPDDAVQHGTDGLYAYSVNQENKAELRKIKVSQSIDGKSVIDEGLSPGQQVI 359 RTLKDATVVPDDAVQH T+GLYAY+VNQ+NKAE+ K+KVS +IDG+SV+DEGL+PGQQVI Sbjct: 311 RTLKDATVVPDDAVQHSTNGLYAYTVNQDNKAEVHKVKVSYAIDGRSVVDEGLAPGQQVI 370 Query: 360 TAGQYKVSPGTLVTTAVASSDPSQSKVAQE 389 T GQ+KV PG+LV+TAVASSDP+Q+KV QE Sbjct: 371 TGGQFKVQPGSLVSTAVASSDPAQNKVRQE 400 >ref|YP_576792.1| secretion protein HlyD [Nitrobacter hamburgensis X14] gb|ABE62332.1| secretion protein HlyD [Nitrobacter hamburgensis X14] Length = 395 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 270/388 (69%), Positives = 318/388 (81%), Gaps = 3/388 (0%) Query: 1 MSKSRTIGWVLVIAAVG-AAGYFGWQKHTSNQQAAEAAQKRSAQRPAVPVKISPVEKADF 59 MS+ RT+GW ++A + A GY WQ A+ A +A VPV+I+ V+K++F Sbjct: 6 MSRLRTLGWASLVAVIALAGGYALWQHSAKEHNGADRAD--AATDSPVPVQIATVKKSNF 63 Query: 60 PVYLTGLGTVQAFNTVQVRTRVDGQITRIAFKEGQFVKAGDTLVEIDPRPYQATLDQAKA 119 P+YLTGLGTVQ FNTV VRTRVDGQI RI FKEGQ V++GD L IDPRP+QA LDQAKA Sbjct: 64 PIYLTGLGTVQGFNTVVVRTRVDGQIDRIVFKEGQLVQSGDLLAHIDPRPFQAALDQAKA 123 Query: 120 KKAQDEANLANANLDLQRYTKLGEFATRQQLDTQRSTVAQLTAQISADEAAIFNAQTQVD 179 KKAQDEANLANANLDL+RYT+LGEFATRQQ DTQRSTV QLTAQI+ADEA I NAQTQ+D Sbjct: 124 KKAQDEANLANANLDLRRYTQLGEFATRQQTDTQRSTVQQLTAQIAADEATISNAQTQLD 183 Query: 180 YTTVKSPIDGIVGLRLVDIGNIVNASAQTGIVTITQIEPITVIFTAPEDQLPDIKAALAV 239 YT +++PI G+ G R VD GNIVNAS QTGIVTI QIEPI VIFTAPE+QLP IK ALA Sbjct: 184 YTNIRAPIAGVTGFRQVDQGNIVNASTQTGIVTIAQIEPIAVIFTAPEEQLPQIKDALAA 243 Query: 240 APPKTIALTTDGKRVLSTGTLALINNQVDTSSGTVRLKAVFDNKDHALWPGQSVSTRLLV 299 PPKTIA +TDGKR+LS GTLALINNQVDT+SGT+RLKA+F+NKDH LWPGQSV+TRLLV Sbjct: 244 GPPKTIAYSTDGKRILSEGTLALINNQVDTTSGTIRLKAIFENKDHVLWPGQSVATRLLV 303 Query: 300 RTLKDATVVPDDAVQHGTDGLYAYSVNQENKAELRKIKVSQSIDGKSVIDEGLSPGQQVI 359 T ++A V PDDAV+HGTDGLYAY+VNQ+NKAELR I+V SIDG++VI++GL+PG VI Sbjct: 304 STRRNAVVAPDDAVKHGTDGLYAYAVNQDNKAELRNIRVGPSIDGQTVIEDGLTPGDHVI 363 Query: 360 TAGQYKVSPGTLVTTAVASSDPSQSKVA 387 AGQY+V PG++VTT VA S+PS+ K A Sbjct: 364 VAGQYRVQPGSVVTTTVADSEPSEGKAA 391 >ref|YP_317879.1| secretion protein HlyD [Nitrobacter winogradskyi Nb-255] gb|ABA04527.1| Secretion protein HlyD [Nitrobacter winogradskyi Nb-255] Length = 411 Score = 535 bits (1377), Expect = e-150, Method: Compositional matrix adjust. Identities = 265/383 (69%), Positives = 308/383 (80%), Gaps = 5/383 (1%) Query: 1 MSKSRTIGWVLVIAAVGA-AGYFGWQKHTSNQQAAEAAQKRSAQRPAVPVKISPVEKADF 59 M +SR GW L+ AA+ A Y W H + + +AQ P VPVKI+ V K DF Sbjct: 31 MPRSRVPGWTLLGAAIAVVASYALW--HGGGKH--NGPSRDAAQAPPVPVKIATVRKGDF 86 Query: 60 PVYLTGLGTVQAFNTVQVRTRVDGQITRIAFKEGQFVKAGDTLVEIDPRPYQATLDQAKA 119 P+YLTGLGTVQ FNTV VRTRVDGQI RIAFKEGQ V+ GD L ID RPYQA LDQAKA Sbjct: 87 PIYLTGLGTVQGFNTVVVRTRVDGQIERIAFKEGQLVEKGDLLAHIDRRPYQAALDQAKA 146 Query: 120 KKAQDEANLANANLDLQRYTKLGEFATRQQLDTQRSTVAQLTAQISADEAAIFNAQTQVD 179 KKAQDEANLANA LDLQRYTKLGEFATR+Q DTQRS V QLTAQI+ADEAAI NAQTQ+D Sbjct: 147 KKAQDEANLANAELDLQRYTKLGEFATRKQTDTQRSMVKQLTAQIAADEAAIVNAQTQLD 206 Query: 180 YTTVKSPIDGIVGLRLVDIGNIVNASAQTGIVTITQIEPITVIFTAPEDQLPDIKAALAV 239 YT++++PI G+ G RLVD GNIVNAS QTGIVTI QIEPI VIFTAPE+QLP IK A+ Sbjct: 207 YTSIRAPIAGVTGFRLVDRGNIVNASTQTGIVTIAQIEPIAVIFTAPENQLPQIKDAITA 266 Query: 240 APPKTIALTTDGKRVLSTGTLALINNQVDTSSGTVRLKAVFDNKDHALWPGQSVSTRLLV 299 PKTIA + DGKR+LS GTL LINNQVDT+SGT+RLKAVF+NKDH LWPGQSVSTRLLV Sbjct: 267 GSPKTIAYSPDGKRMLSEGTLMLINNQVDTASGTIRLKAVFENKDHVLWPGQSVSTRLLV 326 Query: 300 RTLKDATVVPDDAVQHGTDGLYAYSVNQENKAELRKIKVSQSIDGKSVIDEGLSPGQQVI 359 T KDA VVPDDA++HGTDGLYAY VN++NKAE R+I V +SIDG+++I++G++PG++VI Sbjct: 327 STAKDAVVVPDDAIKHGTDGLYAYVVNKDNKAEFRRITVGKSIDGETIIEKGIAPGERVI 386 Query: 360 TAGQYKVSPGTLVTTAVASSDPS 382 AGQY+V PG++VT +ASS S Sbjct: 387 VAGQYRVQPGSVVTETIASSGSS 409