BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0091.0004.p         (141 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771899.1| hypothetical protein bll5259 [Bradyrhizobium ja...   244   4e-63
ref|YP_001205287.1| hypothetical protein BRADO3258 [Bradyrhizobi...   211   2e-53
ref|YP_001240821.1| hypothetical protein BBta_4893 [Bradyrhizobi...   211   3e-53
ref|ZP_07028383.1| 4-oxalocrotonate tautomerase [Afipia sp. 1NLS...   209   9e-53
ref|ZP_08630302.1| hypothetical protein CSIRO_3407 [Bradyrhizobi...   202   2e-50

>ref|NP_771899.1| hypothetical protein bll5259 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50524.1| bll5259 [Bradyrhizobium japonicum USDA 110]
          Length = 140

 Score =  244 bits (622), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 114/135 (84%), Positives = 126/135 (93%)

Query: 1   MPLITVTYATSRERPSLKSDIAAAVSELTAGILHKDPKVTAVIVKSADAADWFAGGKSLA 60
           MPLITV+Y TSR+ PSLK+DIA+AVSELTA ILHKDPKVTA+IVKS DA DWFAGG+SLA
Sbjct: 1   MPLITVSYTTSRQSPSLKADIASAVSELTAKILHKDPKVTAIIVKSVDAGDWFAGGRSLA 60

Query: 61  EQGLASYWLDIHVTEGTNTKDEKAAYLAALFKRMGELLGPLHTESYAHVDEVKGDAYGFG 120
           EQ LASYW+DIHV+EGTNTKDEKAAYLAA+FKRM E+LGPLH E+Y HVDEVKGDAYGFG
Sbjct: 61  EQKLASYWIDIHVSEGTNTKDEKAAYLAAMFKRMAEILGPLHPETYLHVDEVKGDAYGFG 120

Query: 121 GLTQERRYIAGKLEI 135
           GLTQERRYIAGKLE+
Sbjct: 121 GLTQERRYIAGKLEV 135


>ref|YP_001205287.1| hypothetical protein BRADO3258 [Bradyrhizobium sp. ORS 278]
 emb|CAL77055.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 142

 Score =  211 bits (538), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/141 (71%), Positives = 115/141 (81%)

Query: 1   MPLITVTYATSRERPSLKSDIAAAVSELTAGILHKDPKVTAVIVKSADAADWFAGGKSLA 60
           MPLI++ YA+ R  PSLK DIA  V+ LTA IL KDPKVTAVIV  AD A+WFAGG SLA
Sbjct: 1   MPLISINYASQRRSPSLKKDIAETVTALTARILGKDPKVTAVIVAEADPANWFAGGASLA 60

Query: 61  EQGLASYWLDIHVTEGTNTKDEKAAYLAALFKRMGELLGPLHTESYAHVDEVKGDAYGFG 120
           EQGLASYW+D+HVTEGTNTKDEKAAYL A+F  M EL+GPLH E+Y HVDEVK DAYGFG
Sbjct: 61  EQGLASYWIDVHVTEGTNTKDEKAAYLTAVFAAMTELIGPLHHETYLHVDEVKADAYGFG 120

Query: 121 GLTQERRYIAGKLEIVPQNAA 141
           GL+QERRYIA +L++  Q  A
Sbjct: 121 GLSQERRYIAARLDVPLQRGA 141


>ref|YP_001240821.1| hypothetical protein BBta_4893 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36915.1| hypothetical protein BBta_4893 [Bradyrhizobium sp. BTAi1]
          Length = 142

 Score =  211 bits (537), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 100/135 (74%), Positives = 113/135 (83%)

Query: 1   MPLITVTYATSRERPSLKSDIAAAVSELTAGILHKDPKVTAVIVKSADAADWFAGGKSLA 60
           MPLIT+ YA+ R   SLK +IA AV+ LTA IL K PKVTAVIV  ADAADWFAGG SLA
Sbjct: 1   MPLITIVYASQRRSLSLKREIAEAVTALTAQILRKAPKVTAVIVSEADAADWFAGGASLA 60

Query: 61  EQGLASYWLDIHVTEGTNTKDEKAAYLAALFKRMGELLGPLHTESYAHVDEVKGDAYGFG 120
           EQGLASYW+D+HV+EGTNTKDEKAAYLAA+F RM  L+GPLH E+Y HVDEV+GDAYGFG
Sbjct: 61  EQGLASYWIDVHVSEGTNTKDEKAAYLAAVFDRMASLIGPLHPETYLHVDEVRGDAYGFG 120

Query: 121 GLTQERRYIAGKLEI 135
           GLTQERRY+A  L +
Sbjct: 121 GLTQERRYVAASLGV 135


>ref|ZP_07028383.1| 4-oxalocrotonate tautomerase [Afipia sp. 1NLS2]
 gb|EFI50373.1| 4-oxalocrotonate tautomerase [Afipia sp. 1NLS2]
          Length = 142

 Score =  209 bits (533), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 99/141 (70%), Positives = 119/141 (84%)

Query: 1   MPLITVTYATSRERPSLKSDIAAAVSELTAGILHKDPKVTAVIVKSADAADWFAGGKSLA 60
           MPLITV Y+++++    K++IAAAVSEL++ IL KDPKVTA+IV++ +A+DWFAGG+SLA
Sbjct: 1   MPLITVQYSSTKDVSPSKAEIAAAVSELSSKILQKDPKVTAIIVQTVEASDWFAGGRSLA 60

Query: 61  EQGLASYWLDIHVTEGTNTKDEKAAYLAALFKRMGELLGPLHTESYAHVDEVKGDAYGFG 120
           EQ LAS WLDIH+T+GTNTKDEKA ++AA FKR GELLGPLHTESY HV EV+ DAYGFG
Sbjct: 61  EQKLASVWLDIHITDGTNTKDEKAEFIAATFKRFGELLGPLHTESYVHVHEVRADAYGFG 120

Query: 121 GLTQERRYIAGKLEIVPQNAA 141
           GLTQERRYIA KL I P   A
Sbjct: 121 GLTQERRYIAKKLWIPPYQLA 141


>ref|ZP_08630302.1| hypothetical protein CSIRO_3407 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP06681.1| hypothetical protein CSIRO_3407 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 140

 Score =  202 bits (513), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 95/141 (67%), Positives = 116/141 (82%), Gaps = 2/141 (1%)

Query: 1   MPLITVTYATSRERPSLKSDIAAAVSELTAGILHKDPKVTAVIVKSADAADWFAGGKSLA 60
           MPLITV Y + R+ P  K+DIAAAV+ L+A ILHKDP VTAVIV+S D  DWFAGG+SLA
Sbjct: 1   MPLITVQYTSQRQVP--KADIAAAVTRLSADILHKDPNVTAVIVQSVDPPDWFAGGRSLA 58

Query: 61  EQGLASYWLDIHVTEGTNTKDEKAAYLAALFKRMGELLGPLHTESYAHVDEVKGDAYGFG 120
           EQ LAS W+DIH+++GTN+KDEKA ++AA FK M +LLGPLH ESY +V + + DAYGFG
Sbjct: 59  EQKLASVWVDIHISDGTNSKDEKADFIAATFKTMDDLLGPLHNESYIYVHDARADAYGFG 118

Query: 121 GLTQERRYIAGKLEIVPQNAA 141
           GLTQERRYIAGKL + P++AA
Sbjct: 119 GLTQERRYIAGKLAVAPRSAA 139