BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0090.0028.p (470 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001229966.1| 4-phytase [Geobacter uraniireducens Rf4] >gi... 328 1e-87 ref|YP_998579.1| extracellular solute-binding protein [Vermineph... 285 1e-74 ref|YP_994923.1| extracellular solute-binding protein [Vermineph... 273 5e-71 ref|YP_995735.1| extracellular solute-binding protein [Vermineph... 268 1e-69 ref|YP_004332980.1| ABC transporter periplasmic subunit [Pseudon... 242 9e-62 >ref|YP_001229966.1| 4-phytase [Geobacter uraniireducens Rf4] gb|ABQ25393.1| 4-phytase [Geobacter uraniireducens Rf4] Length = 523 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 174/434 (40%), Positives = 253/434 (58%), Gaps = 11/434 (2%) Query: 19 FGATMSAAPAHAQKQGGTLTVGQELDIPGFDPLKVGVYDTSANTAAAAIFDTLMTLDDKG 78 F ++ A ++GGTLTV E D GFDP+K G + A + A AI + L +D KG Sbjct: 30 FSGHVNQVSAAGPERGGTLTVAVEADGRGFDPIKAGFLSSQARSVAMAIEERLFDMDAKG 89 Query: 79 EPAPKLALSWEHAEDFKTWTIKLRPGVKFHDGTPFNAQAVKENFDRQKDPANKCRCAFYI 138 + P+L LS ++D KTWTIKLR GV FHDG PFNA AV ++++R DP N+ R + Sbjct: 90 KLVPELGLSATPSKDGKTWTIKLRKGVSFHDGIPFNADAVVQHWERLLDPKNRFRGLVTM 149 Query: 139 TSIKSVDVIDDLTVRYNFSDPSVNFPATQSIQSSNNV---MQSPTAWKTKGDDYNRNPVG 195 I+SV +DD TVR+ V P I S+N + + SP A K D PVG Sbjct: 150 QPIESVKKVDDFTVRFQLK--HVWVPFKDVIASTNGIAAYIPSPKAMKEGTQDL--APVG 205 Query: 196 TGPYILKSWTAGDRMLLEKNPDYWDKGKPYLDRIILKPLPDAQSRFASLQSGEADIIWDD 255 TGPY K W A DR+++ +NP YW KGKP+LD ++ + +PD Q+RFA L+SGE D+I D Sbjct: 206 TGPYKFKEWIANDRLVVVRNPSYWRKGKPFLDSVVFRTVPDMQTRFAGLKSGELDVILTD 265 Query: 256 EADADNIIKARKDTSLTVHTYQGSGAAVAAFNTKVPPFDDVRVRQALVMALDRTKMSQAI 315 + I++AR+D SL V++ +GA FNT PP +DVRVR+AL A ++ +A Sbjct: 266 RGAS--ILQAREDRSLKVYSSDATGAETFIFNTSKPPLNDVRVRRALSYAWNQEFYIKAS 323 Query: 316 TNGLARPASNPYGDGSWVKCKDDGALPYDVEKAKALIKDYGKPVEFKMLVTATPRGRTGG 375 A +P+ G + C D G ++ EK + LI +YGKPV ++ +T TPRGR G Sbjct: 324 YKDTIAVARDPF--GGTIACGDLGYRGFNPEKGRQLIAEYGKPVNLELQITNTPRGREFG 381 Query: 376 QVLQQFWKRIGANMEIEQVDQATIPPRAFMRQFQLTPWRIVDLADPDPQMYANFHTGSPV 435 +++Q+ +K IG + + + + F +Q+T W++ D D P +YAN ++ S + Sbjct: 382 EIVQRLYKEIGVTVTVTPLTLGQRNKKVFAGDYQMTGWQLFDATDMGPTLYANLYSKSEI 441 Query: 436 ALANYSNPELDRLL 449 + Y NPE+D+LL Sbjct: 442 NFSQYRNPEMDKLL 455 >ref|YP_998579.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gb|ABM59561.1| extracellular solute-binding protein, family 5 [Verminephrobacter eiseniae EF01-2] Length = 521 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 167/450 (37%), Positives = 241/450 (53%), Gaps = 11/450 (2%) Query: 9 AVACIFLVAGFGATMSAAPAHAQKQGGTLTVGQELDIPGFDPLKVGVYDTSANTAAAAIF 68 AVA L T++ A K+GGTL +G E D DPL++G Y A A+F Sbjct: 18 AVATAVLAGLAATTLARAQTETPKRGGTLNIGVEADPASLDPLRLGSY--VERQYAMAVF 75 Query: 69 DTLMTLDDKGEPAPKLALSWEHAEDFKTWTIKLRPGVKFHDGTPFNAQAVKENFDRQKDP 128 DTL+ +D G+ P LA ++E + D + +T+KLR GV FHDGTPF+A AV N DR +DP Sbjct: 76 DTLLDIDASGKLVPSLATAYEISPDGRAYTLKLRQGVTFHDGTPFDADAVVYNLDRVRDP 135 Query: 129 ANKCRCAFYITSIKSVDVIDDLTVRYNFSDPSVNFPATQSIQSSNNVMQSPTAWKTKGDD 188 N CRC I+S++SV +D TV PSV F A + + +M SP A K Sbjct: 136 VNNCRCLANISSVESVKAVDTHTVVVRLQAPSVAFAAL--LADTAAMMASPKALKADPVG 193 Query: 189 YNRNPVGTGPYILKSWTAGDRMLLEKNPDYWDKGKPYLDRIILKPLPDAQSRFASLQSGE 248 + PVGTG + L W G R + E+NP+YW +G+PY DR+I + L ++R ++ QSG Sbjct: 194 FGNVPVGTGAFKLVEWVKGSRFVGERNPNYWRQGQPYADRLIYRGLQSNETRESTFQSGA 253 Query: 249 ADIIWDDEADADNIIKARKDTSLTVHTYQGSGAAVAAFNTKVPPFDDVRVRQALVMALDR 308 DI+ +A + A+KD V G G+ A TK P D+RVR+A+ A R Sbjct: 254 LDIL--TQASPKFVAAAKKDRRFKVLEPDGFGSIFIALRTKHPALADMRVRKAIAHATQR 311 Query: 309 TKMSQAITNGLARPASNPYGDGSWVKCKDDGALPYDVEKAKALIKDYGKPVEFKMLVTAT 368 + +A+ G+ + A+ P+G+G YD++KAKAL+ +YG+ VE ++++ T Sbjct: 312 ELLVKAVYQGMYKVATTPFGEGLPGLSPVTDYPAYDLDKAKALLAEYGQAVELRLMMDNT 371 Query: 369 PRGRTGGQVLQQFWKRIGANMEIEQVDQATIPPRAFMRQFQLTPWRIVDLADPDPQMYAN 428 P Q LQQ W+R G + + VDQA + +F T +R DPD Y Sbjct: 372 PIALQAAQALQQMWQRAGIKVTLTPVDQARLVQNMLTHEFDTTLFRWSGRPDPDLNAYTF 431 Query: 429 FHTGSPVA-----LANYSNPELDRLLEHAR 453 FH+ + Y+NPE+DRLL+ R Sbjct: 432 FHSSNAEKKISSNYIQYANPEMDRLLDAGR 461 >ref|YP_994923.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gb|ABM55905.1| extracellular solute-binding protein, family 5 [Verminephrobacter eiseniae EF01-2] Length = 506 Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 151/428 (35%), Positives = 239/428 (55%), Gaps = 9/428 (2%) Query: 32 KQGGTLTVGQELDIPGFDPLKVGVYDTSANTAAAAIFDTLMTLDDKGEPAPKLALSWEHA 91 K+GGTLT+G E + GF+P K +++ + A+++ +TL + + P+L L + A Sbjct: 27 KRGGTLTIGMEAEFSGFNPAKARIFNQNTLAPASSVLETLFVFEG-AQIVPRLGLDYAEA 85 Query: 92 EDFKTWTIKLRPGVKFHDGTPFNAQAVKENFDRQKDPANKCRCAFYITSIKSVDVIDDLT 151 D + T++LRPGV FHDGTPFNA AV ++ P + I +K+V+ +D+++ Sbjct: 86 PDRLSATVRLRPGVTFHDGTPFNADAVVAHYAWLLAPGTGINLS-PIAPLKTVEKVDEMS 144 Query: 152 VRYNFSDPSVNFPATQSIQSSNNVMQSPTAWKTKGDDYNRNPVGTGPYILKSWTAGDRML 211 VR+ P V + + ++ N + SP A K + ++R P+GTGP+I K W AGDR++ Sbjct: 145 VRFVLRQPWVALQSALAAENLVNFIGSPAALKNDPEGFHRKPIGTGPFIFKEWQAGDRIV 204 Query: 212 LEKNPDYWDKGKPYLDRIILKPLPDAQSRFASLQSGEADIIWDDEADADNIIKARKDTSL 271 +E+NP YW+ PYL+R+I + LPDA +R+ S++SG+ DI D A +++ ARK+ + Sbjct: 205 MERNPHYWEPQLPYLERLIYRVLPDANTRYQSIKSGQVDIGRMD--TASHVLDARKNPQI 262 Query: 272 TVHTYQGSGAAVAAFNTKVPPFDDVRVRQALVMALDRTKMSQAITNGLARPASNPYGDGS 331 VH YQGSGA FN PF+D RVR A+V A + M G ++ +G S Sbjct: 263 KVHEYQGSGAISWNFNAAKEPFNDQRVRAAVVHAFNAKAMLDTFFLGTTVATTDLFGPNS 322 Query: 332 WVKCKDDGALPYDVEKAKALIKDYGKPVEFKMLVTATPRGRTGGQVLQQFWKRIGANMEI 391 C +D+ KA+AL+ + GKPV+F+++ T TP GR ++QQF K G ++I Sbjct: 323 PWFCPRLNWRSHDLAKARALLAEVGKPVKFQLVSTNTPTGRRQAGMVQQFAKEAGMEVDI 382 Query: 392 EQVDQATIPPRAFMRQFQLTPWRIVDL-ADPDPQM--YANFHTGSPVALANYSNPELDRL 448 +Q+ +Q+ WR D+ +PD + Y G+PV + + +D L Sbjct: 383 RLTEQSQNVRVGLSGDYQMGVWRFGDITGEPDGALAYYFGGENGTPV--SRHDTARIDAL 440 Query: 449 LEHARTXP 456 L AR P Sbjct: 441 LGKARAEP 448 >ref|YP_995735.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gb|ABM56717.1| extracellular solute-binding protein, family 5 [Verminephrobacter eiseniae EF01-2] Length = 517 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 153/430 (35%), Positives = 231/430 (53%), Gaps = 20/430 (4%) Query: 32 KQGGTLTVGQELDIPGFDPL-KVGVYDTSANTAAAAIFDTLMTLDDKGEPAPKLALSWEH 90 + GGTL VG DP + G D + A++D L+ + G LA S E Sbjct: 38 QAGGTLNVGLYAQPATLDPAGRSG--DAGSQAVLYAVYDPLIDIQRDGSYHSALATSVER 95 Query: 91 AEDFKTWTIKLRPGVKFHDGTPFNAQAVKENFDRQKDPANKCRCAFYITSIKSVDVIDDL 150 + D + WT+ LR GV+FHDGTPFNAQAV +F R DP +C C + +I +++ Sbjct: 96 SPDSRRWTVTLRQGVRFHDGTPFNAQAVAAHFKRLADPDTRCTCLPTVQAITAIETPASD 155 Query: 151 TVRYNFSDPSVNFPATQSIQSSNNVMQSPTAWKTKGDDYNRNPVGTGPYILKSWTAGDRM 210 TV + + +FPA Q + +S + SPTA G DY PVGTGP+ L +T GDR+ Sbjct: 156 TVVFRLASGWASFPA-QVLGASFAFIPSPTAVAAAGADYGIRPVGTGPFKLVQFTRGDRI 214 Query: 211 LLEKNPDYWDKGKPYLDRIILKPLPDAQSRFASLQSGEADIIWDDEADADNIIKAR--KD 268 ++E+N YW G P+L+RI+ +PLPD Q+R SL++G+ D++ N ++A + Sbjct: 215 VVERNAAYWRAGLPHLERIVFRPLPDEQTRLQSLRAGDIDLM-----QTINPLQAEQARA 269 Query: 269 TSLTVHTYQGSGAAVAAFNTKVPPFDDVRVRQALVMALDRTKMSQAITNGLARPASNPYG 328 L G G+ + + PF D RVR+AL +A++R + +TNG+ RP P G Sbjct: 270 AGLQARINIGLGSQMVVLDHSRAPFSDPRVRRALALAVNREAFVKLMTNGICRPGQGPLG 329 Query: 329 DGSWVKCKDDGALP---YDVEKAKALIKDYGKPVEFKMLVTATPRGRTGGQVLQQFWKRI 385 +GS DG P YD + A+ L+ YGKPV F++L A+P GR ++LQ+ W+ + Sbjct: 330 EGS----PYDGQAPWPGYDPKTARELLAAYGKPVAFELLTLASPEGRKQAEILQRMWRAV 385 Query: 386 GANMEIEQVDQATIPPRAFMRQ-FQLTPWRIVDLADPDPQMYANFHTGSPVALANYSNPE 444 G + +D + R +++ F+ W + DPD ++ FH+ Y+NP+ Sbjct: 386 GVQARLAPLDLPQLIDRVLVKKNFEAATWVAQEYPDPD-GLFEGFHSRGRFNYMRYANPQ 444 Query: 445 LDRLLEHART 454 LD LLE AR Sbjct: 445 LDALLELARV 454 >ref|YP_004332980.1| ABC transporter periplasmic subunit [Pseudonocardia dioxanivorans CB1190] gb|AEA25127.1| ABC-type transporter, periplasmic subunit [Pseudonocardia dioxanivorans CB1190] Length = 540 Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 149/435 (34%), Positives = 232/435 (53%), Gaps = 26/435 (5%) Query: 32 KQGGTLTVGQELDIPGFDPLKVGVYDTSANTAAAAIFDTLMTLDDKGEPAPKLALSWEHA 91 K GGTL + ++ +I FDP ++N AA A++D+L+ LDDKGEP P +A S E Sbjct: 56 KDGGTLILAEDREIVSFDPTV-----QNSNMAALAVYDSLLKLDDKGEPQPYMARSMETT 110 Query: 92 EDFKTWTIKLRPGVKFHDGTPFNAQAV----KENFDRQKDPANKCRCAFYITSIKSVDVI 147 ++ TW + LRP VKF DGTP +A AV + + D++ P+N+ Y T I S+ + Sbjct: 111 DNGTTWRMGLRPEVKFSDGTPLDADAVIFNVQRHIDKKSSPSNR-----YATVIASMRAV 165 Query: 148 DDLTVRYNFSDPSVNFPATQSI--QSSN-NVMQSPTAWKTKGD-DYNRNPVGTGPYILKS 203 D TV + +PS FP ++ S N + SPTA +TKG+ + PVG GP+ L S Sbjct: 166 DPTTVEFTLKNPSGTFPQLFALPFNSGNLGTIVSPTAIRTKGEASIAKEPVGAGPFTLAS 225 Query: 204 WTAGDRMLLEKNPDYWDKGKPYLDRIILKPLPDAQSRFASLQSGEADIIWDDEADADNII 263 W ++ L +NP+YW G P+L + +PLPD ++R+AS+++G+ D+++ +I Sbjct: 226 WVRDSKLTLVRNPNYWQPGMPHLQGLEFRPLPDTETRYASIENGDVDVVYG--GYHTELI 283 Query: 264 KARKDTSLTVHTYQGSGAAVAAFNTKVPPFDDVRVRQALVMALDRTKMSQAITNGLARPA 323 + + +L V+ G+GA FN K PFDD R+R+A+V A+D ++ + G A Sbjct: 284 RGLGNPNLKVYYGSGNGAEYIYFNQKRAPFDDRRMREAVVRAIDLDALAASQYRGQMERA 343 Query: 324 SNPYGDGSWVKCKD--DGALPYDVEKAKALIKDY---GKPVEFKMLVTATPRGRTGGQVL 378 + +GD S + + D +DVEKAK L+ DY G + T P + L Sbjct: 344 NGYFGDTSPYQSEQARDAWPAFDVEKAKQLVADYKASGGSATVQYKTTNAPNRVAFAEFL 403 Query: 379 QQFWKRIGANMEIEQVDQATIPPRAFM-RQFQLTPWRIVDLADPDPQMYANFHTGSPVAL 437 Q K +G +++++ D A R FQ+ W + P P + FHTG Sbjct: 404 QAQLKAVGIDIQVQFYDLAQYSSSVVQSRDFQIAGWVGGPVDGPFPGAFNLFHTGGSTNY 463 Query: 438 ANYSNPELDRLLEHA 452 +YSNP++D L+ A Sbjct: 464 GDYSNPQVDAALDTA 478