BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0090.0014.p (329 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08624250.1| inner-membrane translocator [Acetonema longum... 247 2e-63 ref|YP_001416521.1| ABC transporter-like protein [Xanthobacter a... 243 5e-62 ref|ZP_06689284.1| branched-chain amino acid ABC superfamily ATP... 240 2e-61 ref|ZP_08273775.1| inner-membrane translocator [Oxalobacteraceae... 240 3e-61 gb|EGP48484.1| inner-membrane translocator 49 [Achromobacter xyl... 239 4e-61 >ref|ZP_08624250.1| inner-membrane translocator [Acetonema longum DSM 6540] gb|EGO64458.1| inner-membrane translocator [Acetonema longum DSM 6540] Length = 313 Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 125/298 (41%), Positives = 189/298 (63%), Gaps = 5/298 (1%) Query: 20 MLALPQLVTSSFAVDIFIRILLFSFIGVAWNLMGGYAKQLSLGHAAYFGLGAYTSTIMQV 79 +L PQ++ SF + + I + L++ +G AWN++GGYA Q SLGHA YF +GAYTST+M + Sbjct: 17 LLLFPQVINQSFYLHLMILVFLYALLGGAWNMIGGYAGQASLGHAVYFAIGAYTSTMMTL 76 Query: 80 NYGISPWIGMIAGGVVAMLASLPIGWLCFRLRGPYFTIATIATAQVLMLIFLKFRDFAW- 138 +GI+PWIGM+ G V+A+L S +G+ CFR++G YF IATIA ++ F+ F ++ W Sbjct: 77 EFGINPWIGMLTGAVLAVLVSAALGYPCFRIKGHYFVIATIALGEI---AFVLFTNWEWV 133 Query: 139 -GAEGTTIPNLGSAPLMMQFEEKSSYYYVVLGLLVVGLWITHRIEKSWIGYYLVAIGEDE 197 GA G +P L + + QF K YYYV L LL + + T+ +EKS YY AI +DE Sbjct: 134 GGAVGKHLPILSTNFIDFQFAGKMPYYYVALTLLTLQVAFTYFMEKSHFEYYFQAIRKDE 193 Query: 198 DAAEAVGVNAPKVKRDIYMISAFLTALAGTFYTQYIYFIDPATAFSFNVSIEAALVSIVG 257 D A ++G+N + K SA A GTFY QY+ +IDP + +SI+ L++I+G Sbjct: 194 DTARSLGINITRYKMFAMAFSALFMAFGGTFYAQYLLYIDPESVLPMMLSIQVCLIAILG 253 Query: 258 GIGTLWGPVIGTVLLETTSALLQSWLGSSVGGIQLTVYSLILMAVILWRPTGLIGFAT 315 GIGT++GPV+G ++ + ++W G S + L +Y L++M + +P+GL+GF T Sbjct: 254 GIGTVFGPVLGAFIMIPLAEFSRAWFGGSGSALDLVMYGLLIMVFAVMKPSGLMGFIT 311 >ref|YP_001416521.1| ABC transporter-like protein [Xanthobacter autotrophicus Py2] gb|ABS66864.1| ABC transporter related [Xanthobacter autotrophicus Py2] Length = 616 Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 131/308 (42%), Positives = 196/308 (63%), Gaps = 1/308 (0%) Query: 19 VMLALPQLVTSSFAVDIFIRILLFSFIGVAWNLMGGYAKQLSLGHAAYFGLGAYTSTIMQ 78 +++ +P S+F V +F+ I +F + AWN++GGYA QLSLGH ++GLG YT+ ++ Sbjct: 41 LLVIIPAWSGSTFMVHVFVTICVFGALSTAWNILGGYAGQLSLGHTVFYGLGGYTAALLL 100 Query: 79 VNYGISPWIGMIAGGVVAMLASLPIGWLCFRLRGPYFTIATIATAQVLMLIFLKFRDFAW 138 ++G+SPWIGMIAG +A L SL IG+ CFRLRGP+F++ATIA +V+ L+ + F Sbjct: 101 THFGLSPWIGMIAGAALAALVSLGIGYPCFRLRGPFFSLATIAFLEVVRLLSIHFNGVTG 160 Query: 139 GAEGTTIPNLGSAPLMMQFEEKSSYYYVVLGLLVVGLWITHRIEKSWIGYYLVAIGEDED 198 G+ G +P P M+ F EK +Y Y+ GLLV+ L +++ I S +GY L A+ E + Sbjct: 161 GSAGLVVPLQIGWPWMI-FREKINYLYIAFGLLVLCLAVSYAIRHSRLGYALTAVRERDS 219 Query: 199 AAEAVGVNAPKVKRDIYMISAFLTALAGTFYTQYIYFIDPATAFSFNVSIEAALVSIVGG 258 AA+A G++ VK ISA LTAL GTF+ Y+ F++PAT FS +IE A+ +++GG Sbjct: 220 AAQAAGIDINGVKLWAMAISAALTALVGTFHAMYMTFLEPATLFSLATAIEIAMFALIGG 279 Query: 259 IGTLWGPVIGTVLLETTSALLQSWLGSSVGGIQLTVYSLILMAVILWRPTGLIGFATDIY 318 +GT+ GP++GTVL+ + L + WLG+S G+ VY +L+ + L P GL+G Sbjct: 280 LGTVAGPLLGTVLVVPLAELARGWLGASANGLHGFVYGSVLVIITLTLPGGLVGTFGPFV 339 Query: 319 HRTARRKP 326 R R P Sbjct: 340 VRLIDRLP 347 >ref|ZP_06689284.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gb|EFF73803.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 607 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 128/310 (41%), Positives = 203/310 (65%), Gaps = 3/310 (0%) Query: 18 VVMLALPQLVTSSFAVDIFIRILLFSFIGVAWNLMGGYAKQLSLGHAAYFGLGAYTSTIM 77 +VM +P ++ + F ++F+ + +F+ + VAWN++GGYA QLSLGHA ++G+G YT+T++ Sbjct: 32 IVMFLVPVVMGTPFWTNLFVLLFVFASLSVAWNIVGGYAGQLSLGHAVFYGIGGYTATLL 91 Query: 78 QVNYGISPWIGMIAGGVVAMLASLPIGWLCFRLRGPYFTIATIATAQVLMLIFLKFRDFA 137 N+GISPWIGM+AG V++ ++ I + RLRGP+F +ATIA +V+ L+ + + Sbjct: 92 TQNFGISPWIGMLAGAVISAAVAIVISYPTLRLRGPFFALATIAILEVVRLLVIHEESWT 151 Query: 138 WGAEGTTIP-NLGSAPLMMQFEEKSSYYYVVLGLLVVGLWITHRIEKSWIGYYLVAIGED 196 G+ G ++P N+G A ++ F EK +Y + GL + W++ I KS IG+YL+AI E Sbjct: 152 GGSSGISLPLNIGWAWIV--FREKINYVIIAFGLFLFVTWVSWAIRKSRIGHYLIAIRER 209 Query: 197 EDAAEAVGVNAPKVKRDIYMISAFLTALAGTFYTQYIYFIDPATAFSFNVSIEAALVSIV 256 EDAA AVG++ +VK ++SA LT++ GTF+ Y+ F+DP++AFS +SI+ A+ +++ Sbjct: 210 EDAALAVGIHTVRVKIIAAVVSAMLTSIIGTFHITYLTFVDPSSAFSLELSIQVAMFALI 269 Query: 257 GGIGTLWGPVIGTVLLETTSALLQSWLGSSVGGIQLTVYSLILMAVILWRPTGLIGFATD 316 GG+GT+ GP+ GT L+ + L + WL S G+ +Y LIL+AV+L P GL G Sbjct: 270 GGLGTVAGPIAGTFLVLPIAELARGWLSSVGNGMHGLIYGLILVAVVLTIPRGLAGAFGP 329 Query: 317 IYHRTARRKP 326 R R P Sbjct: 330 AIERALARLP 339 >ref|ZP_08273775.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480] gb|EGF32753.1| inner-membrane translocator [Oxalobacteraceae bacterium IMCC9480] Length = 349 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 141/305 (46%), Positives = 199/305 (65%), Gaps = 8/305 (2%) Query: 15 IGAVVMLAL-------PQLVTSSFAVDIFIRILLFSFIGVAWNLMGGYAKQLSLGHAAYF 67 IG +MLAL PQ V S +I I IL+ + +GVAWN++GGYA Q+SLG AA++ Sbjct: 24 IGYALMLALLVIAVFVPQFVDSPSHQNIAILILMAAQMGVAWNIVGGYAGQVSLGQAAFY 83 Query: 68 GLGAYTSTIMQVNYGISPWIGMIAGGVVAMLASLPIGWLCFRLRGPYFTIATIATAQVLM 127 G+GAYTST++ +G++PW+ MIAGGVVA L S+ IGW CFRL+ PYF +ATIA A+++ Sbjct: 84 GIGAYTSTLLFAQFGLNPWLAMIAGGVVAALISIVIGWSCFRLKSPYFAMATIAVAEIIQ 143 Query: 128 LIFLKFRDFAWGAEGTTIPNLGSAPLMMQFEEKSSYYYVVLGLLVVGLWITHRIEKSWIG 187 +IF + +FA GA G TIP + F K YYY+ LGLLV+ L IE+S+ G Sbjct: 144 IIFTNW-EFAGGAVGLTIPMDRQGWDVFVFASKVPYYYIALGLLVLTLLANLMIERSYFG 202 Query: 188 YYLVAIGEDEDAAEAVGVNAPKVKRDIYMISAFLTALAGTFYTQYIYFIDPATAFSFNVS 247 YY AI ++ DAA ++GVN K K + +S+F TAL G+FY Q +IDPA+ +S Sbjct: 203 YYFRAIKDEPDAARSLGVNLRKYKLIAFAVSSFFTALGGSFYAQKELYIDPASVLGTGLS 262 Query: 248 IEAALVSIVGGIGTLWGPVIGTVLLETTSALLQSWLGSSVGGIQLTVYSLILMAVILWRP 307 I+ ALVSI+GGIGTL+GPV+G +L ++ G + G L +Y+ +++ V ++ P Sbjct: 263 IKMALVSILGGIGTLFGPVLGAGILTLIDEGTRALFGGTGRGTDLIIYAALIIVVAVYYP 322 Query: 308 TGLIG 312 G+IG Sbjct: 323 NGVIG 327 >gb|EGP48484.1| inner-membrane translocator 49 [Achromobacter xylosoxidans AXX-A] Length = 593 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 127/310 (40%), Positives = 203/310 (65%), Gaps = 3/310 (0%) Query: 18 VVMLALPQLVTSSFAVDIFIRILLFSFIGVAWNLMGGYAKQLSLGHAAYFGLGAYTSTIM 77 +VM +P + + F ++F+ + +FS + VAWN++GGYA QLSLGHA ++G+G YT+T++ Sbjct: 18 IVMFIVPVVTGTPFWTNLFVLLFVFSALSVAWNIVGGYAGQLSLGHAVFYGIGGYTATLL 77 Query: 78 QVNYGISPWIGMIAGGVVAMLASLPIGWLCFRLRGPYFTIATIATAQVLMLIFLKFRDFA 137 N+GISPW GM+AG +++ + ++ I + RLRGP+F +ATIA +V+ L+ + + Sbjct: 78 TQNFGISPWFGMLAGALISAVVAIIISYPTLRLRGPFFALATIAILEVVRLLVIHEESWT 137 Query: 138 WGAEGTTIP-NLGSAPLMMQFEEKSSYYYVVLGLLVVGLWITHRIEKSWIGYYLVAIGED 196 G+ G ++P N+G A ++ F EK +Y + GL ++ W++ I KS IG+YL+AI E Sbjct: 138 GGSSGISLPLNIGWAWIV--FREKINYVIIAFGLFLLVTWVSWYIRKSRIGHYLIAIRER 195 Query: 197 EDAAEAVGVNAPKVKRDIYMISAFLTALAGTFYTQYIYFIDPATAFSFNVSIEAALVSIV 256 EDAA AVG++ +VK ++SA LT++ GTF+ Y+ F+DP++AFS +SI+ A+ +++ Sbjct: 196 EDAALAVGIHTVRVKIIAAVVSAMLTSVIGTFHITYLTFVDPSSAFSLELSIQVAMFALI 255 Query: 257 GGIGTLWGPVIGTVLLETTSALLQSWLGSSVGGIQLTVYSLILMAVILWRPTGLIGFATD 316 GG+GT+ GP+ GT L+ + L + WL S G+ +Y LIL+AV+L P GL G Sbjct: 256 GGLGTVAGPIAGTFLVLPIAELARGWLSSVGNGMHGLIYGLILVAVVLTIPRGLAGAFGP 315 Query: 317 IYHRTARRKP 326 R R P Sbjct: 316 AIERALARLP 325