BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0090.0013.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001414923.1| ABC transporter-like protein [Xanthobacter a... 256 2e-66 ref|YP_001416611.1| ABC transporter-like protein [Xanthobacter a... 254 9e-66 ref|YP_003450608.1| branched-chain amino acid transport system A... 253 2e-65 ref|YP_004660285.1| HAAT family amino acid/amide ABC transporter... 250 1e-64 ref|ZP_08273774.1| Branched-chain amino acid transport ATP-bindi... 248 5e-64 >ref|YP_001414923.1| ABC transporter-like protein [Xanthobacter autotrophicus Py2] gb|ABS65266.1| ABC transporter related [Xanthobacter autotrophicus Py2] Length = 245 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 119/237 (50%), Positives = 178/237 (75%), Gaps = 1/237 (0%) Query: 5 LVIKGLSKRFGGLRAVQDVSFTVQENETVALIGPNGAGKTTSFHLITGFHRPDSGSVVAF 64 L + G+SKRFGGL+AV +SF ++ E + L+GPNGAGKTT+F++I G R D+G++ Sbjct: 6 LEVDGISKRFGGLQAVSPLSFHMEPGEILGLLGPNGAGKTTAFNMIAGALRTDTGAIRFS 65 Query: 65 GHEVVGLRPHDVCALGLARTFQVAKPFGAMTVLANVMTGAFLRDRHIAAARNKAREAIEF 124 G ++VG +P D+C LG+ARTFQ++KPFG ++V+ NVM GAF+R + AR +A + ++F Sbjct: 66 GRDIVGEKPWDICRLGIARTFQLSKPFGGLSVVENVMVGAFVRTSSESEARAEAEKVVDF 125 Query: 125 VGLGAKEQTPAKDLTTIDQRRLEMARALATQPRILLLDEVMAGLNPAEIDQAVALVKKLS 184 +GL AK T A+DLT D+R+LE+ RALAT PR+LL+DEV+AG P E + VALV+++ Sbjct: 126 LGLSAKACTDAEDLTAFDRRKLELGRALATGPRLLLMDEVVAGATPTEAQEMVALVRRVR 185 Query: 185 ASGLTIVIVEHVMRAIMAVARHIVVLDHGQKIAEGAPKEIVENPEVIRAYLGS-YVH 240 G++I+IVEHVM+ IM ++ ++VLD+G+ IA+G P+++V P+V++AY G YVH Sbjct: 186 DLGVSILIVEHVMKVIMGLSDRVIVLDYGKLIADGPPQQVVNQPDVLKAYFGERYVH 242 >ref|YP_001416611.1| ABC transporter-like protein [Xanthobacter autotrophicus Py2] gb|ABS66954.1| ABC transporter related [Xanthobacter autotrophicus Py2] Length = 245 Score = 254 bits (649), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 120/243 (49%), Positives = 176/243 (72%), Gaps = 1/243 (0%) Query: 2 AEALVIKGLSKRFGGLRAVQDVSFTVQENETVALIGPNGAGKTTSFHLITGFHRPDSGSV 61 A L ++ +SKRFGGL+AV+D+SF ++E E + L+GPNGAGKTT+F++I GF RPD G V Sbjct: 3 APLLSVEAISKRFGGLQAVKDLSFRLEEGEILGLLGPNGAGKTTAFNMIAGFFRPDEGRV 62 Query: 62 VAFGHEVVGLRPHDVCALGLARTFQVAKPFGAMTVLANVMTGAFLRDRHIAAARNKAREA 121 + G V GL+P D+C G+ RTFQ++KPFG ++V+ N+M G F R R A E Sbjct: 63 LLAGRNVAGLKPWDICKAGIGRTFQLSKPFGDLSVVENLMVGGFARSSDRRRIRTLAEEI 122 Query: 122 IEFVGLGAKEQTPAKDLTTIDQRRLEMARALATQPRILLLDEVMAGLNPAEIDQAVALVK 181 F+GL AK +T A +LT D+R+LE+ RAL+T+PR+LL+DEV+AG P+E + VALV+ Sbjct: 123 AVFLGLEAKAETEAHNLTAFDRRKLELGRALSTEPRLLLMDEVVAGATPSEAVEMVALVR 182 Query: 182 KLSASGLTIVIVEHVMRAIMAVARHIVVLDHGQKIAEGAPKEIVENPEVIRAYLGS-YVH 240 ++ G++++IVEHVM+ IMA++ ++V+D G IA+G P+E+V +P+V++AY G YV Sbjct: 183 RVRERGVSVLIVEHVMKVIMALSDRVLVMDRGALIADGRPQEVVTSPDVLKAYFGERYVV 242 Query: 241 PPA 243 P A Sbjct: 243 PRA 245 >ref|YP_003450608.1| branched-chain amino acid transport system ATP-binding protein [Azospirillum sp. B510] dbj|BAI74064.1| branched-chain amino acid transport system ATP-binding protein [Azospirillum sp. B510] Length = 242 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 126/238 (52%), Positives = 173/238 (72%), Gaps = 1/238 (0%) Query: 1 MAEALVIKGLSKRFGGLRAVQDVSFTVQENETVALIGPNGAGKTTSFHLITGFHRPDSGS 60 M L I+ LSKRF GL+AV +V F+V E +ALIGPNGAGKTT+F+LI G PD G Sbjct: 1 MTALLEIERLSKRFRGLKAVSEVGFSVPEGCILALIGPNGAGKTTTFNLIAGVFPPDEGR 60 Query: 61 VVAFGHEVVGLRPHDVCALGLARTFQVAKPFGAMTVLANVMTGAFLRDRHIAAARNKARE 120 V G + GL+P+ VCA G+ RTFQ+ KPFG +TV NV+ GA R+R + AAR +AR Sbjct: 61 VTLKGRNLTGLKPNLVCAAGIGRTFQIVKPFGQLTVEDNVVVGALARERSVEAARIQARV 120 Query: 121 AIEFVGLGAKEQTPAKDLTTIDQRRLEMARALATQPRILLLDEVMAGLNPAEIDQAVALV 180 +E + L + PA+ LT D++RLE+ARALAT+P +LLLDEV+AGL P E+D+ V ++ Sbjct: 121 VLERLELADQANRPARSLTLPDRKRLEVARALATRPTLLLLDEVLAGLRPTEVDRMVEVL 180 Query: 181 KKLS-ASGLTIVIVEHVMRAIMAVARHIVVLDHGQKIAEGAPKEIVENPEVIRAYLGS 237 + L+ GLTI+++EHVMRA+MA++ +VVLDHG+KIA+G P E+V +P V+ +YLG+ Sbjct: 181 RDLNRREGLTILMIEHVMRAVMALSDRVVVLDHGEKIADGVPAEVVADPRVVESYLGA 238 >ref|YP_004660285.1| HAAT family amino acid/amide ABC transporter ATP-binding protein 1 [Thermotoga thermarum DSM 5069] gb|AEH51189.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Thermotoga thermarum DSM 5069] Length = 251 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 123/244 (50%), Positives = 166/244 (68%) Query: 5 LVIKGLSKRFGGLRAVQDVSFTVQENETVALIGPNGAGKTTSFHLITGFHRPDSGSVVAF 64 L + G++ +FG L A +VSF V E E V+LIGPNGAGKTT F+ I+GF++P SG V+ Sbjct: 6 LEVNGITMKFGSLVANDNVSFVVNEGEIVSLIGPNGAGKTTLFNCISGFYKPFSGKVLFD 65 Query: 65 GHEVVGLRPHDVCALGLARTFQVAKPFGAMTVLANVMTGAFLRDRHIAAARNKAREAIEF 124 G ++ G +PH + +GL RTFQ+ KP MTV NV+TGAFLR + A A E +E Sbjct: 66 GKDITGKKPHQIAKIGLTRTFQIVKPLLDMTVFDNVLTGAFLRAKTRKEAEKIANEVLEL 125 Query: 125 VGLGAKEQTPAKDLTTIDQRRLEMARALATQPRILLLDEVMAGLNPAEIDQAVALVKKLS 184 L K A +LT D++RLE+AR LATQPR+++LDE MAGLN EI +AV L KL+ Sbjct: 126 THLYDKRFMLAANLTIADKKRLEIARVLATQPRMIMLDEAMAGLNQTEIKEAVELCLKLN 185 Query: 185 ASGLTIVIVEHVMRAIMAVARHIVVLDHGQKIAEGAPKEIVENPEVIRAYLGSYVHPPAQ 244 G+T++IVEH+M AIM ++ IVVL+ G+KIAEG+P+EI N EVI+AYLG H ++ Sbjct: 186 QQGITLLIVEHIMEAIMPISNRIVVLNAGKKIAEGSPEEIANNEEVIKAYLGERYHAKSK 245 Query: 245 GDDH 248 + Sbjct: 246 ESNR 249 >ref|ZP_08273774.1| Branched-chain amino acid transport ATP-binding protein livG [Oxalobacteraceae bacterium IMCC9480] gb|EGF32752.1| Branched-chain amino acid transport ATP-binding protein livG [Oxalobacteraceae bacterium IMCC9480] Length = 237 Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 119/232 (51%), Positives = 162/232 (69%) Query: 5 LVIKGLSKRFGGLRAVQDVSFTVQENETVALIGPNGAGKTTSFHLITGFHRPDSGSVVAF 64 L ++ ++K+FGG+ A QDVSF++ E V LIGPNGAGKTT F+ I G+ P SG + Sbjct: 4 LSVRNVTKKFGGITANQDVSFSLGAGEIVGLIGPNGAGKTTMFNCIAGYFPPTSGEIYLN 63 Query: 65 GHEVVGLRPHDVCALGLARTFQVAKPFGAMTVLANVMTGAFLRDRHIAAARNKAREAIEF 124 ++ GL P G+ARTFQVA+ F +M+ NVM GAFL+++H+ AAR A + +EF Sbjct: 64 DEKISGLSPEQCALAGIARTFQVARTFTSMSAQENVMVGAFLKNKHVGAARQVANDLLEF 123 Query: 125 VGLGAKEQTPAKDLTTIDQRRLEMARALATQPRILLLDEVMAGLNPAEIDQAVALVKKLS 184 V LG + PA +T +QRRL +ARALA PR+LL+DEVMAGLNP E+ + V +V K+ Sbjct: 124 VNLGKFKDKPAGSMTISEQRRLAVARALAVGPRLLLMDEVMAGLNPTEVKETVEVVLKIR 183 Query: 185 ASGLTIVIVEHVMRAIMAVARHIVVLDHGQKIAEGAPKEIVENPEVIRAYLG 236 G++ +IVEHV+ IM +A IVVLD+G+KIA+G P+EI NP+VI AYLG Sbjct: 184 QRGISCLIVEHVLEGIMPIANAIVVLDYGKKIADGTPQEISNNPQVIAAYLG 235