BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0090.0009.p         (132 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001887840.1| IclR family transcriptional regulator [Burkh...    82   3e-14
ref|YP_003545821.1| IclR-family putative transcriptional regulat...    79   2e-13
ref|YP_004553235.1| IclR family transcriptional regulator [Sphin...    76   2e-12
ref|YP_002794992.1| transcriptional regulator [Laribacter hongko...    72   3e-11
ref|ZP_05930005.1| IclR family transcriptional regulator [Brucel...    70   8e-11

>ref|YP_001887840.1| IclR family transcriptional regulator [Burkholderia phytofirmans
           PsJN]
 gb|ACD18470.1| transcriptional regulator, IclR family [Burkholderia phytofirmans
           PsJN]
          Length = 283

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 63/112 (56%)

Query: 14  PRSKKKVGRALLSLFTEEELGAYVVRVKAERPDEFDYVQKRTLPDVELCRDRGFAVSLGE 73
           P  +  +GRALL+    E   A    +  + P E+   ++R L  ++   +RGF VS G+
Sbjct: 165 PIVRTAMGRALLAALPAERREALCNEIAVKSPHEWSTFRERVLSAIDYFYERGFCVSYGD 224

Query: 74  WRREIFGVAAPLYRTPTGECLSVNCGVPSFRFSAEQIERECGPRILGLARSI 125
            RREI  VA P+  +  GE L  NCGVPS+    +Q+E + GPR++ + RS+
Sbjct: 225 LRREIHAVAVPMKPSADGEILVFNCGVPSYLLKEKQLEGDIGPRLVSMVRSV 276


>ref|YP_003545821.1| IclR-family putative transcriptional regulator [Sphingobium
           japonicum UT26S]
 dbj|BAI97209.1| IclR-family putative transcriptional regulator [Sphingobium
           japonicum UT26S]
          Length = 275

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 62/115 (53%), Gaps = 2/115 (1%)

Query: 14  PRSKKKVGRALLSLFTEEELGAYVVRVKAERPDEFDYVQKRTLPDVELCRDRGFAVSLGE 73
           P  +  +GRA+LSL + EE  A   R     P   D  +      VE C+  GF  +   
Sbjct: 159 PLYRTAIGRAILSLMSPEERAALHQRTLETAPQLADG-KAEADQGVEDCKTDGFCFA-SS 216

Query: 74  WRREIFGVAAPLYRTPTGECLSVNCGVPSFRFSAEQIERECGPRILGLARSIRAL 128
           WR E   VAAPL RT  GECL++ C VP+FR +  ++  + GPR++ LA  IRAL
Sbjct: 217 WRAETLAVAAPLLRTADGECLALVCAVPAFRTNENEMRNDVGPRLVSLAARIRAL 271


>ref|YP_004553235.1| IclR family transcriptional regulator [Sphingobium chlorophenolicum
           L-1]
 gb|AEG48729.1| transcriptional regulator, IclR family [Sphingobium
           chlorophenolicum L-1]
          Length = 269

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 2/117 (1%)

Query: 14  PRSKKKVGRALLSLFTEEELGAYVVRVKAERPDEFDYVQKRTLPDVELCRDRGFAVSLGE 73
           P  +  +GRA+LSL + EE  A   R     P   D  +      VE C   GF  +   
Sbjct: 153 PLYRTAIGRAILSLKSPEERAALHQRTLETAPHLADG-KAEADQGVEDCETDGFCFA-SS 210

Query: 74  WRREIFGVAAPLYRTPTGECLSVNCGVPSFRFSAEQIERECGPRILGLARSIRALVE 130
           WR E   VAAPL RT  GECL++ C VP+FR +  ++  + GPR++ LA  IRAL  
Sbjct: 211 WRAETLAVAAPLLRTADGECLALVCAVPAFRTNENEMRGDVGPRLVSLAARIRALAN 267


>ref|YP_002794992.1| transcriptional regulator [Laribacter hongkongensis HLHK9]
 gb|ACO73983.1| Probable transcriptional regulator [Laribacter hongkongensis HLHK9]
          Length = 288

 Score = 71.6 bits (174), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 1/110 (0%)

Query: 16  SKKKVGRALLSLFTEEELGAYVVRVKAERPDEFDYVQKRTLPDVELCRDRGFAVSLGEWR 75
            +  VGRA L+   EEE    +  ++   P+E+  ++K          D G+ +S+GEW 
Sbjct: 175 HQSSVGRACLAAMPEEEREFLLGHIRTRHPEEWPAIRKGLERAFRDYADYGYCLSIGEWH 234

Query: 76  REIFGVAAPLYRTPTGECLSVNCGVPSFRFSAEQIERECGPRILGLARSI 125
           R++  VA PL     G  L+ NCG PSF+ S E++E + GPR++ + ++I
Sbjct: 235 RDVNSVAVPLLHQQYG-VLAFNCGGPSFQLSREKLEDDIGPRLINMVQNI 283


>ref|ZP_05930005.1| IclR family transcriptional regulator [Brucella abortus bv. 3 str.
           Tulya]
 gb|EEX84192.1| IclR family transcriptional regulator [Brucella abortus bv. 3 str.
           Tulya]
          Length = 284

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 7/119 (5%)

Query: 14  PRSKKKVGRALLSLFTEEELGAYVVRVKAERPDEFDYVQK---RTLPDVELCRDRGFAVS 70
           P ++  VGRA L+   E+E    +  ++   P+ +  ++K   R L D E   D G+ +S
Sbjct: 169 PLARSSVGRACLAAMPEDERTFILEHIREREPENWPSIRKGLDRALRDFE---DYGYCLS 225

Query: 71  LGEWRREIFGVAAPLYRTPTGECLSVNCGVPSFRFSAEQIERECGPRILGLARSIRALV 129
           +GEW R++  VA PL     G  L  NCG PSF+   E++E + GPR++ +  +I + V
Sbjct: 226 IGEWHRDVNSVAVPLVHKQYG-VLVFNCGGPSFQLPREKLEDDIGPRLIEMVHNISSAV 283