BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0090.0004.p         (120 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_07029339.1| conserved hypothetical protein [Acidobacteriu...   171   4e-41
ref|YP_002220107.1| hypothetical protein Lferr_1678 [Acidithioba...   102   2e-20
ref|NP_631635.1| hypothetical protein SCO7593 [Streptomyces coel...    81   6e-14
ref|YP_746233.1| hypothetical protein GbCGDNIH1_2412 [Granulibac...    78   4e-13
ref|YP_001339362.1| hypothetical protein Mmwyl1_0491 [Marinomona...    77   1e-12

>ref|ZP_07029339.1| conserved hypothetical protein [Acidobacterium sp. MP5ACTX8]
 gb|EFI58433.1| conserved hypothetical protein [Acidobacterium sp. MP5ACTX8]
          Length = 122

 Score =  171 bits (432), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 78/116 (67%), Positives = 95/116 (81%)

Query: 5   QTTSSPVLPEHEDDPHRFHIFVMVKTTRHWLDLKTEQRLAFLHEEVIPLLRRRPELKVRW 64
            T  S VLPEHEDDP   HIF++VK+TRHWLDL T  R AFL EE++PLL +RPE+ +R+
Sbjct: 4   NTILSAVLPEHEDDPETLHIFMLVKSTRHWLDLATADRTAFLKEELLPLLVKRPEVTMRY 63

Query: 65  FEPEAFSTRATDVMICETDDLSAWAWFCDHLRETRFWDHYFEVLDIMPALEGNYLA 120
           F+ EAFS RATDV+  ET D+SAW W CDHLRET+FWD+YFEVL+I+P+LEGNYLA
Sbjct: 64  FDAEAFSARATDVLFWETKDISAWQWICDHLRETKFWDYYFEVLEILPSLEGNYLA 119


>ref|YP_002220107.1| hypothetical protein Lferr_1678 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 ref|YP_002426417.1| hypothetical protein AFE_2012 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gb|ACH83900.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
           53993]
 gb|ACK80182.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
           23270]
 gb|EGQ63562.1| hypothetical protein GGI1_20214 [Acidithiobacillus sp. GGI-221]
          Length = 118

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 70/101 (69%)

Query: 20  HRFHIFVMVKTTRHWLDLKTEQRLAFLHEEVIPLLRRRPELKVRWFEPEAFSTRATDVMI 79
             + +F+++KTTR WLDL+ E R AF+ E V P+L   P + +R+F+ E+++ R +D+++
Sbjct: 4   QTYTLFMLLKTTRQWLDLEPEVRFAFIKENVNPILEAHPTVSMRFFDTESYTARISDIVV 63

Query: 80  CETDDLSAWAWFCDHLRETRFWDHYFEVLDIMPALEGNYLA 120
            +T DL A+      LR+T FWDHYFEVL+I+PA+E  Y A
Sbjct: 64  WKTSDLIAYQSVIKGLRDTIFWDHYFEVLEIIPAVEDGYAA 104


>ref|NP_631635.1| hypothetical protein SCO7593 [Streptomyces coelicolor A3(2)]
 ref|ZP_06526364.1| conserved hypothetical protein [Streptomyces lividans TK24]
 sp|Q9EWJ1.1|DARCH_STRCO RecName: Full=Darcynin homolog
 emb|CAC16514.1| hypothetical protein SC7H9.05 [Streptomyces coelicolor A3(2)]
 gb|EFD64614.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 121

 Score = 80.9 bits (198), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 1/95 (1%)

Query: 25  FVMVKTTRHWLDLKTEQRLAFLHEEVIPLLRRR-PELKVRWFEPEAFSTRATDVMICETD 83
           F++VKTT  WL L  E+R+     EV+P++R R   ++ R+++ E +S R TDV + E D
Sbjct: 13  FMLVKTTPEWLALTVEERVHAFTTEVVPVVRARTAGVRSRFYDTEFYSARVTDVWVWEAD 72

Query: 84  DLSAWAWFCDHLRETRFWDHYFEVLDIMPALEGNY 118
           D  A+    D LRET FWD YFEV+D++   E  Y
Sbjct: 73  DHHAYQLLVDALRETPFWDRYFEVVDLLVGTENGY 107


>ref|YP_746233.1| hypothetical protein GbCGDNIH1_2412 [Granulibacter bethesdensis
           CGDNIH1]
 sp|Q0BPE2.1|DARCH_GRABC RecName: Full=Darcynin homolog
 gb|ABI63310.1| hypothetical protein GbCGDNIH1_2412 [Granulibacter bethesdensis
           CGDNIH1]
          Length = 124

 Score = 77.8 bits (190), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 4/116 (3%)

Query: 4   LQTTSSPVLPEHEDDPHRFHIFVMVKTTRHWLDLKTEQRLAFLHEEVIPLLRRRPE-LKV 62
           +Q T +  +P  E       +F++VKT+  WL    E+R A L E+  P+LR+    + +
Sbjct: 1   MQRTYTVTIPSFEPA---LTVFMLVKTSPEWLGFPVERRFALLEEQFTPILRKHAAHVTL 57

Query: 63  RWFEPEAFSTRATDVMICETDDLSAWAWFCDHLRETRFWDHYFEVLDIMPALEGNY 118
           R+F+ E ++TR TD+ + +  D  ++    + LRET FWD YFE+++I+P +E  Y
Sbjct: 58  RFFDVEFYATRVTDLWMWDARDHHSYQLLVEDLRETAFWDRYFEIVEILPGVENAY 113


>ref|YP_001339362.1| hypothetical protein Mmwyl1_0491 [Marinomonas sp. MWYL1]
 gb|ABR69427.1| conserved hypothetical protein [Marinomonas sp. MWYL1]
          Length = 113

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 61/101 (60%), Gaps = 1/101 (0%)

Query: 19  PHRFHIFVMVKTTRHWLDLKTEQRLAFLHEEVIPLLRRRPELKVRWFEPEAFSTRATDVM 78
           P ++  FV +  T  WL L  E+R  +  E +  +  R P++ VR F+ EAF+TR +D+ 
Sbjct: 2   PRKYTFFVHMNATAAWLSLSREERNRYFTETIGDIFARYPDVSVRLFDCEAFTTRCSDIA 61

Query: 79  ICETDDLSAWAWFCDHLRETR-FWDHYFEVLDIMPALEGNY 118
           + ET++L  + +  + LR+++ F   YFEV+DI PALE  +
Sbjct: 62  VYETENLQNYYFLIEALRDSQIFTVPYFEVVDIFPALENGF 102