BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0088.0012.p (242 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768556.1| transposase [Bradyrhizobium japonicum USDA 110]... 480 e-134 ref|NP_768287.1| transposase [Bradyrhizobium japonicum USDA 110]... 476 e-132 ref|YP_575647.1| putative transposase [Nitrobacter hamburgensis ... 409 e-112 ref|YP_579074.1| putative transposase [Nitrobacter hamburgensis ... 388 e-106 ref|NP_771827.1| transposase [Bradyrhizobium japonicum USDA 110]... 388 e-106 >ref|NP_768556.1| transposase [Bradyrhizobium japonicum USDA 110] gb|AAG60893.1|AF322013_12 ID460 [Bradyrhizobium japonicum] dbj|BAC47181.1| blr1916 [Bradyrhizobium japonicum USDA 110] Length = 586 Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust. Identities = 234/242 (96%), Positives = 237/242 (97%) Query: 1 LAEIDRAMAANLRFGCVPADAGYGLSAPFRQGLTERGLAWAVGIPRHQKVYPVDVKLIWP 60 LAEIDRAMAAN+RFGCV ADAGYGLSAPFRQGLTERGLAWAVGIPRHQKVYPVDVKLIWP Sbjct: 189 LAEIDRAMAANMRFGCVLADAGYGLSAPFRQGLTERGLAWAVGIPRHQKVYPVDVKLIWP 248 Query: 61 ITKVRGKPRKHYVPDILSIAAEQMLASAKWKTVSWRSGTKGRLKARFAALRVRTADGPAQ 120 ITKVRGKPRKH+VPDILSIAAEQMLASAKWKTVSWRSGTKGRLKARFAALRVRTADGP Q Sbjct: 249 ITKVRGKPRKHHVPDILSIAAEQMLASAKWKTVSWRSGTKGRLKARFAALRVRTADGPPQ 308 Query: 121 RIWDKGQQHLPGDEAWLIGEQRASGEKKYYLANLPAATDLRTLAATIKARWICEQAHQQL 180 RIWDKGQQHLPGDEAWLIGEQRASGE+KYYLANLPA TDLRTLAATIKARWICEQAHQQL Sbjct: 309 RIWDKGQQHLPGDEAWLIGEQRASGERKYYLANLPATTDLRTLAATIKARWICEQAHQQL 368 Query: 181 KEELGLDHFEGRSWQGLHRHALMTMIAYAFLQHRRLAYAGRKKKNQRASASANHARRTSR 240 KEELGLDHFEGRSWQGLHRHALMTMIAYAFLQHRRLAYAGRKKKNQRASAS NHARRT R Sbjct: 369 KEELGLDHFEGRSWQGLHRHALMTMIAYAFLQHRRLAYAGRKKKNQRASASTNHARRTPR 428 Query: 241 HR 242 HR Sbjct: 429 HR 430 >ref|NP_768287.1| transposase [Bradyrhizobium japonicum USDA 110] dbj|BAC46912.1| bll1647 [Bradyrhizobium japonicum USDA 110] Length = 449 Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust. Identities = 232/242 (95%), Positives = 234/242 (96%) Query: 1 LAEIDRAMAANLRFGCVPADAGYGLSAPFRQGLTERGLAWAVGIPRHQKVYPVDVKLIWP 60 LAEIDRAMAAN+RFGCV ADAGYGLSAPFRQGLTERGLAWAVGIPRHQKVYPVDVKLIWP Sbjct: 189 LAEIDRAMAANMRFGCVLADAGYGLSAPFRQGLTERGLAWAVGIPRHQKVYPVDVKLIWP 248 Query: 61 ITKVRGKPRKHYVPDILSIAAEQMLASAKWKTVSWRSGTKGRLKARFAALRVRTADGPAQ 120 ITKVRGKPRKH+VPDILSIAAEQMLASAKWKTVSWRSGTKGRLKARFAALRVRTADGP Q Sbjct: 249 ITKVRGKPRKHHVPDILSIAAEQMLASAKWKTVSWRSGTKGRLKARFAALRVRTADGPPQ 308 Query: 121 RIWDKGQQHLPGDEAWLIGEQRASGEKKYYLANLPAATDLRTLAATIKARWICEQAHQQL 180 RIWDKGQQHLPGDE WLIGEQRASGE KYYLANLPA TDLRTLAATIKARWICEQAHQQL Sbjct: 309 RIWDKGQQHLPGDEVWLIGEQRASGESKYYLANLPATTDLRTLAATIKARWICEQAHQQL 368 Query: 181 KEELGLDHFEGRSWQGLHRHALMTMIAYAFLQHRRLAYAGRKKKNQRASASANHARRTSR 240 KEELGLDHFEGRSWQGLHRHALMTMIAYAFLQHRRLAYAGRKKKNQRASAS NHARRT Sbjct: 369 KEELGLDHFEGRSWQGLHRHALMTMIAYAFLQHRRLAYAGRKKKNQRASASTNHARRTPC 428 Query: 241 HR 242 HR Sbjct: 429 HR 430 >ref|YP_575647.1| putative transposase [Nitrobacter hamburgensis X14] gb|ABE61187.1| putative transposase [Nitrobacter hamburgensis X14] Length = 445 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 202/242 (83%), Positives = 215/242 (88%), Gaps = 1/242 (0%) Query: 1 LAEIDRAMAANLRFGCVPADAGYGLSAPFRQGLTERGLAWAVGIPRHQKVYPVDVKLIWP 60 LAEIDR MAA +RFGCV ADAGYGLSAPFRQGLT RGLAWAVGIPRH KVYPV VKLIWP Sbjct: 181 LAEIDRVMAAGMRFGCVLADAGYGLSAPFRQGLTTRGLAWAVGIPRHLKVYPVGVKLIWP 240 Query: 61 ITKVRGKPRKHYVPDILSIAAEQMLASAKWKTVSWRSGTKGRLKARFAALRVRTADGPAQ 120 + RG+PRK ++PDILS AAE MLA+AKW+ VSWR+GTKGRL+ARFAA+RVRTADGP Q Sbjct: 241 VAG-RGRPRKRHIPDILSRAAEDMLANAKWQNVSWRNGTKGRLEARFAAVRVRTADGPPQ 299 Query: 121 RIWDKGQQHLPGDEAWLIGEQRASGEKKYYLANLPAATDLRTLAATIKARWICEQAHQQL 180 RI D GQQHLPGDEAWLIGE R SGEKKYYLANLPA T LR LAATIKARWICEQAHQQL Sbjct: 300 RIKDMGQQHLPGDEAWLIGEHRTSGEKKYYLANLPAKTKLRALAATIKARWICEQAHQQL 359 Query: 181 KEELGLDHFEGRSWQGLHRHALMTMIAYAFLQHRRLAYAGRKKKNQRASASANHARRTSR 240 KEELGLDHF+GRSWQGLHRHALMTMIAYAFLQHRRLA AGRKKKNQR++ASA A RT Sbjct: 360 KEELGLDHFKGRSWQGLHRHALMTMIAYAFLQHRRLAQAGRKKKNQRSTASAEPAGRTPS 419 Query: 241 HR 242 HR Sbjct: 420 HR 421 >ref|YP_579074.1| putative transposase [Nitrobacter hamburgensis X14] gb|ABE64614.1| putative transposase [Nitrobacter hamburgensis X14] Length = 444 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 195/242 (80%), Positives = 209/242 (86%), Gaps = 2/242 (0%) Query: 1 LAEIDRAMAANLRFGCVPADAGYGLSAPFRQGLTERGLAWAVGIPRHQKVYPVDVKLIWP 60 LAEIDR MAA +RFGCV ADAGYGLSAPFRQGLT RGLAWAVGIP QKVYP VKLI+P Sbjct: 181 LAEIDRVMAAGVRFGCVLADAGYGLSAPFRQGLTARGLAWAVGIPGRQKVYPAGVKLIFP 240 Query: 61 ITKVRGKPRKHYVPDILSIAAEQMLASAKWKTVSWRSGTKGRLKARFAALRVRTADGPAQ 120 I RG+PR+ ++PD LS+ AE MLA AKWK VSWR GTKGRLKARFAA+RVR A GP Q Sbjct: 241 IAG-RGRPRQRHIPDPLSMPAENMLADAKWKNVSWRLGTKGRLKARFAAVRVRIA-GPPQ 298 Query: 121 RIWDKGQQHLPGDEAWLIGEQRASGEKKYYLANLPAATDLRTLAATIKARWICEQAHQQL 180 RI DKGQQHLPG+EAWLIGE R+SGEKKYYLANLPA T+LR LAA +KARWICEQAHQQL Sbjct: 299 RIKDKGQQHLPGEEAWLIGEHRSSGEKKYYLANLPAGTNLRQLAAAVKARWICEQAHQQL 358 Query: 181 KEELGLDHFEGRSWQGLHRHALMTMIAYAFLQHRRLAYAGRKKKNQRASASANHARRTSR 240 KEELGLDHFEGRSWQGLHRHALMTMIAYAFLQHRR+A AGRKKKNQR +A A A TSR Sbjct: 359 KEELGLDHFEGRSWQGLHRHALMTMIAYAFLQHRRIATAGRKKKNQRPAAPAQLAGHTSR 418 Query: 241 HR 242 HR Sbjct: 419 HR 420 >ref|NP_771827.1| transposase [Bradyrhizobium japonicum USDA 110] ref|NP_774910.1| transposase [Bradyrhizobium japonicum USDA 110] dbj|BAC50452.1| bll5187 [Bradyrhizobium japonicum USDA 110] dbj|BAC53535.1| blr8270 [Bradyrhizobium japonicum USDA 110] Length = 457 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 192/242 (79%), Positives = 208/242 (85%), Gaps = 1/242 (0%) Query: 1 LAEIDRAMAANLRFGCVPADAGYGLSAPFRQGLTERGLAWAVGIPRHQKVYPVDVKLIWP 60 LAEIDR MAA +RFGCV ADAGYGLSAPFRQGLT RGL WAVGI QKVYP VKLI+P Sbjct: 193 LAEIDRVMAAGVRFGCVLADAGYGLSAPFRQGLTARGLVWAVGILGRQKVYPAGVKLIFP 252 Query: 61 ITKVRGKPRKHYVPDILSIAAEQMLASAKWKTVSWRSGTKGRLKARFAALRVRTADGPAQ 120 I RG+PR+ ++PD+LS+ +E MLA AKWK VSWR GTKGRL+ARFAA+RVR ADGP Q Sbjct: 253 IAG-RGRPRQRHIPDLLSMPSEDMLADAKWKNVSWRLGTKGRLQARFAAVRVRIADGPPQ 311 Query: 121 RIWDKGQQHLPGDEAWLIGEQRASGEKKYYLANLPAATDLRTLAATIKARWICEQAHQQL 180 RI DKGQQHLPG+EAWLIGE R+SGEKKYYLANLPA DLR LAAT+KARWICEQAHQQL Sbjct: 312 RIKDKGQQHLPGEEAWLIGEHRSSGEKKYYLANLPAEMDLRQLAATVKARWICEQAHQQL 371 Query: 181 KEELGLDHFEGRSWQGLHRHALMTMIAYAFLQHRRLAYAGRKKKNQRASASANHARRTSR 240 KEELGLDHFEGRSW GLHRHALMTMIAYAFLQHRR+A AGRKKKNQRA+ SA A R R Sbjct: 372 KEELGLDHFEGRSWHGLHRHALMTMIAYAFLQHRRIAKAGRKKKNQRAATSAKPAGRAQR 431 Query: 241 HR 242 HR Sbjct: 432 HR 433