BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0087.0044.p (290 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766864.1| hypothetical protein bll0224 [Bradyrhizobium ja... 444 e-123 ref|YP_578877.1| hypothetical protein Nham_3690 [Nitrobacter ham... 420 e-115 ref|YP_530400.1| hypothetical protein RPC_0506 [Rhodopseudomonas... 418 e-115 ref|YP_001243364.1| hypothetical protein BBta_7612 [Bradyrhizobi... 407 e-112 ref|YP_001202744.1| putative transmembrane protein [Bradyrhizobi... 399 e-109 >ref|NP_766864.1| hypothetical protein bll0224 [Bradyrhizobium japonicum USDA 110] dbj|BAC45489.1| bll0224 [Bradyrhizobium japonicum USDA 110] Length = 289 Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust. Identities = 238/289 (82%), Positives = 256/289 (88%) Query: 1 MTTRTATLVGLTAILMWSLLSVMTVATGAIPAFQLAAMTFAIGTAVAFASFLLRPSAFGA 60 MT RTATL+GLTAILMWSLLSVMTVATG IPAFQLAAMTFAIG V +++ R A + Sbjct: 1 MTPRTATLIGLTAILMWSLLSVMTVATGKIPAFQLAAMTFAIGGLVGLLTWIGRGEAAKS 60 Query: 61 LKQPLVAWVVGVGGLFGYHALYFLALRFAPPAEAGLLNYLWPLLIVLFSSLLPGERLAVH 120 L+QPL W VGVGGLFGYHALYFLALRFAPPAEAGLLNYLWPLLIVLFSS LPGERLAVH Sbjct: 61 LRQPLAVWTVGVGGLFGYHALYFLALRFAPPAEAGLLNYLWPLLIVLFSSFLPGERLAVH 120 Query: 121 HIVGALLGLAGTVLLFAGNTGAFTTEQIPGFAAAFVAAFVWASYSVMSRRLKAVPTDAVA 180 HIVGA+LGL GTVLLFAGNT F +PG AAF+AAFVWA+YSV+SRRLKAVPTDAVA Sbjct: 121 HIVGAVLGLVGTVLLFAGNTSGFAPGAVPGLIAAFIAAFVWATYSVLSRRLKAVPTDAVA 180 Query: 181 GFCLATAVLAALVHMMVETTVWPATPLQWLAVIALGIGPVGAAFFAWDIGMKRGDIRVLG 240 GFCLATA+LAAL+H +ETTVWP T LQW++VI LGIGPVGAAF+AWDIGMKRGDIRVLG Sbjct: 181 GFCLATALLAALMHGALETTVWPETALQWISVIGLGIGPVGAAFYAWDIGMKRGDIRVLG 240 Query: 241 AASYATPLLSTAFLILAGFAKPSANIAIAAILIAGGGLIAAKDMVLRKR 289 AASYATPLLST FLI AGFAK SANIAIAA+LIAGGGLIAAKDMVLRKR Sbjct: 241 AASYATPLLSTGFLIAAGFAKASANIAIAAVLIAGGGLIAAKDMVLRKR 289 >ref|YP_578877.1| hypothetical protein Nham_3690 [Nitrobacter hamburgensis X14] gb|ABE64417.1| protein of unknown function DUF6, transmembrane [Nitrobacter hamburgensis X14] Length = 288 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 224/288 (77%), Positives = 252/288 (87%), Gaps = 1/288 (0%) Query: 1 MTTRTATLVGLTAILMWSLLSVMTVATGAIPAFQLAAMTFAIGTAVAFASFLLRPSAFGA 60 MT+RTATL+GLTAILMWSLL+VMTVATG IPAFQLAAMTFAIG AS+L RP A Sbjct: 1 MTSRTATLIGLTAILMWSLLAVMTVATGRIPAFQLAAMTFAIGGLAGCASWLFRPEGARA 60 Query: 61 LKQPLVAWVVGVGGLFGYHALYFLALRFAPPAEAGLLNYLWPLLIVLFSSLLPGERLAVH 120 L+QP VAW+VGVGGLFGYHALYF+ALR APPAEAGLLNYLWPLLIVLFSSLLPGERLA H Sbjct: 61 LQQPPVAWLVGVGGLFGYHALYFIALRLAPPAEAGLLNYLWPLLIVLFSSLLPGERLAPH 120 Query: 121 HIVGALLGLAGTVLLFAGNTG-AFTTEQIPGFAAAFVAAFVWASYSVMSRRLKAVPTDAV 179 H++GA+LGL GTVLL AGNT F Q+ G AAAF+AAFVWA+YSV+SRRL +VPTDAV Sbjct: 121 HLIGAILGLTGTVLLVAGNTSIQFERTQMSGLAAAFIAAFVWAAYSVLSRRLASVPTDAV 180 Query: 180 AGFCLATAVLAALVHMMVETTVWPATPLQWLAVIALGIGPVGAAFFAWDIGMKRGDIRVL 239 AGFCLATAVLAA+ HM+VE+TVWP + QWLA+ ALGIGPVG AF+ WDIGMKRGDIRVL Sbjct: 181 AGFCLATAVLAAVAHMLVESTVWPDSGAQWLAIAALGIGPVGLAFYVWDIGMKRGDIRVL 240 Query: 240 GAASYATPLLSTAFLILAGFAKPSANIAIAAILIAGGGLIAAKDMVLR 287 GAA+YATPLLST FLILAGFAKP+A + +AA+LIAGGGLIAAKDM+ + Sbjct: 241 GAAAYATPLLSTTFLILAGFAKPTAALGVAAVLIAGGGLIAAKDMIWK 288 >ref|YP_530400.1| hypothetical protein RPC_0506 [Rhodopseudomonas palustris BisB18] gb|ABD86081.1| protein of unknown function DUF6, transmembrane [Rhodopseudomonas palustris BisB18] Length = 290 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 228/290 (78%), Positives = 250/290 (86%), Gaps = 1/290 (0%) Query: 1 MTTRTATLVGLTAILMWSLLSVMTVATGAIPAFQLAAMTFAIGTAVAFASFLLRPSAFGA 60 MT R ATL+GL+AILMWSLL+V+TVA+G +PAFQLAA+TFAIG V F+S+LLRP A A Sbjct: 1 MTVRAATLIGLSAILMWSLLAVLTVASGTMPAFQLAALTFAIGALVGFSSWLLRPGAARA 60 Query: 61 LKQPLVAWVVGVGGLFGYHALYFLALRFAPPAEAGLLNYLWPLLIVLFSSLLPGERLAVH 120 L+Q +AW VGVGGLFGYHALYFLALR APPAEAGLLNYLWPLLIVLFSSLLPGERL H Sbjct: 61 LRQAPLAWAVGVGGLFGYHALYFLALRLAPPAEAGLLNYLWPLLIVLFSSLLPGERLRWH 120 Query: 121 HIVGALLGLAGTVLLFAGNTGA-FTTEQIPGFAAAFVAAFVWASYSVMSRRLKAVPTDAV 179 H+ GALLGL GTVLLFAGN A F I G AAFVAAF+WA+YSVMSRRL+AVPTDAV Sbjct: 121 HVAGALLGLVGTVLLFAGNASARFEPGHIAGLVAAFVAAFIWAAYSVMSRRLRAVPTDAV 180 Query: 180 AGFCLATAVLAALVHMMVETTVWPATPLQWLAVIALGIGPVGAAFFAWDIGMKRGDIRVL 239 AGFCLATAVLA LVH VETTVWP TPLQW A+ LGIGPVG AF+AWDIGMKRGDIRVL Sbjct: 181 AGFCLATAVLAVLVHGAVETTVWPDTPLQWAAIAILGIGPVGGAFYAWDIGMKRGDIRVL 240 Query: 240 GAASYATPLLSTAFLILAGFAKPSANIAIAAILIAGGGLIAAKDMVLRKR 289 GAASYATPLLST FLILAGFA+PSA + +AA LIAGGGLIAAKDM+ R+R Sbjct: 241 GAASYATPLLSTGFLILAGFAEPSATLGLAAALIAGGGLIAAKDMIWRRR 290 >ref|YP_001243364.1| hypothetical protein BBta_7612 [Bradyrhizobium sp. BTAi1] gb|ABQ39458.1| hypothetical protein BBta_7612 [Bradyrhizobium sp. BTAi1] Length = 290 Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust. Identities = 228/290 (78%), Positives = 252/290 (86%), Gaps = 1/290 (0%) Query: 1 MTTRTATLVGLTAILMWSLLSVMTVATGAIPAFQLAAMTFAIGTAVAFASFLLRPSAFGA 60 M+ RTATL+GL AILMWSLL+VMTVATG IPAFQLAAMTFAIG AV + L +P A Sbjct: 1 MSQRTATLIGLAAILMWSLLAVMTVATGTIPAFQLAAMTFAIGGAVGLLTLLRKPQALQL 60 Query: 61 LKQPLVAWVVGVGGLFGYHALYFLALRFAPPAEAGLLNYLWPLLIVLFSSLLPGERLAVH 120 L+QP AW VGVGGLFGYHALYFLALRFAPPAEAGLLNYLWPLLIVLFS+ LPGERLA+H Sbjct: 61 LRQPAAAWAVGVGGLFGYHALYFLALRFAPPAEAGLLNYLWPLLIVLFSAFLPGERLAIH 120 Query: 121 HIVGALLGLAGTVLLFAGNTGAFTTEQIPGFAAAFVAAFVWASYSVMSRRLKAVPTDAVA 180 H++GA LGL GTVLLF GN +F Q+PG AAAFVAAFVWA YSV+SRRLKAVPT+AVA Sbjct: 121 HVIGAALGLVGTVLLFVGNGASFAASQLPGLAAAFVAAFVWAIYSVLSRRLKAVPTEAVA 180 Query: 181 GFCLATAVLAALVHMMVETTVWPATPLQWLAVIALGIGPVGAAFFAWDIGMKRGDIRVLG 240 GFCLAT++LAA+VH +E TVWP TP QWLAVI LGIGPVGAAF+AWDIGMKRGDIRVLG Sbjct: 181 GFCLATSLLAAIVHAAIERTVWPGTPAQWLAVIGLGIGPVGAAFYAWDIGMKRGDIRVLG 240 Query: 241 AASYATPLLSTAFLILAGFAKPSANIAIAAILIAGGGLIAAKDMV-LRKR 289 AASYATPLLSTAFLIL G+A+PSA IA+AA+LIAGGGL+AAKDM LR R Sbjct: 241 AASYATPLLSTAFLILGGYARPSAAIAVAALLIAGGGLVAAKDMFRLRGR 290 >ref|YP_001202744.1| putative transmembrane protein [Bradyrhizobium sp. ORS 278] emb|CAL74501.1| conserved hypothetical protein; putative transmembrane protein [Bradyrhizobium sp. ORS 278] Length = 290 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 222/289 (76%), Positives = 258/289 (89%) Query: 1 MTTRTATLVGLTAILMWSLLSVMTVATGAIPAFQLAAMTFAIGTAVAFASFLLRPSAFGA 60 M+ RTATL+GLTAILMWSLL+++TVATG IPAFQLAAMTFA+G V +++ RP+A + Sbjct: 1 MSQRTATLIGLTAILMWSLLALLTVATGKIPAFQLAAMTFAVGGLVGMLTWIGRPAAPRS 60 Query: 61 LKQPLVAWVVGVGGLFGYHALYFLALRFAPPAEAGLLNYLWPLLIVLFSSLLPGERLAVH 120 LKQP+ AW+VGVGGLFGYHALYFLALRFAPPAEAGLLNYLWPLLIVLFS+LLPGERLA+H Sbjct: 61 LKQPMRAWLVGVGGLFGYHALYFLALRFAPPAEAGLLNYLWPLLIVLFSALLPGERLALH 120 Query: 121 HIVGALLGLAGTVLLFAGNTGAFTTEQIPGFAAAFVAAFVWASYSVMSRRLKAVPTDAVA 180 H++GA LGL GTVLLF GN +F +Q+PG AAAFVAAFVWA YSV+SRRLKAVPTDAVA Sbjct: 121 HVIGAALGLIGTVLLFMGNGASFAADQLPGLAAAFVAAFVWAIYSVLSRRLKAVPTDAVA 180 Query: 181 GFCLATAVLAALVHMMVETTVWPATPLQWLAVIALGIGPVGAAFFAWDIGMKRGDIRVLG 240 GFCLAT++LAA+VH +VE VWP +QWLAV LGIGPVGAAF+AWD+GMKRGDIRVLG Sbjct: 181 GFCLATSLLAAVVHGLVEPKVWPDGAVQWLAVAGLGIGPVGAAFYAWDVGMKRGDIRVLG 240 Query: 241 AASYATPLLSTAFLILAGFAKPSANIAIAAILIAGGGLIAAKDMVLRKR 289 AASYATPLLSTAFLILAG+A+P+A IA+AA+LIAGGGL+AAKD+ L +R Sbjct: 241 AASYATPLLSTAFLILAGYAQPTAAIAVAALLIAGGGLVAAKDLFLLRR 289