BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0087.0034.p         (142 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767687.1| transcriptional regulator [Bradyrhizobium japon...   251   4e-65
ref|NP_947215.1| MarR family transcriptional regulator [Rhodopse...   235   1e-60
ref|YP_487218.1| MarR family transcriptional regulator [Rhodopse...   234   4e-60
ref|YP_001236899.1| MarR/EmrR family transcriptional regulator [...   234   4e-60
ref|YP_001991074.1| MarR family transcriptional regulator [Rhodo...   233   7e-60

>ref|NP_767687.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46312.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
           110]
          Length = 168

 Score =  251 bits (640), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 120/141 (85%), Positives = 129/141 (91%)

Query: 1   VPAFITFIGNKLSNSATAFYQKNFGVNVTEWRIISQLAIEPGIPASRICQVIGFDKGPVS 60
           VPAFITFI NKLSNSATAFYQ+ FGVNVTEWRI+S LAIEPGIPASRIC VIGFDKGPVS
Sbjct: 27  VPAFITFIANKLSNSATAFYQREFGVNVTEWRIMSLLAIEPGIPASRICHVIGFDKGPVS 86

Query: 61  RNLAALQKRGLLTIRTAPDDGRTHSITLTARGRAIHDKVIVAALERERRLLACLKKDERE 120
           R LA L+KRGL++IRT P+DGRTHSI LTARGRA HDKVIVAA ERERRLL+CL KDER+
Sbjct: 87  RTLAGLEKRGLVSIRTDPNDGRTHSIALTARGRATHDKVIVAAFERERRLLSCLSKDERD 146

Query: 121 VLIELLRRLHENLGAVTGQST 141
           VLI+LLRRLHENLGAVTG ST
Sbjct: 147 VLIDLLRRLHENLGAVTGSST 167


>ref|NP_947215.1| MarR family transcriptional regulator [Rhodopseudomonas palustris
           CGA009]
 emb|CAE27311.1| possible transcriptional regulator, MarR/EmrR family
           [Rhodopseudomonas palustris CGA009]
          Length = 171

 Score =  235 bits (600), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 110/141 (78%), Positives = 126/141 (89%)

Query: 1   VPAFITFIGNKLSNSATAFYQKNFGVNVTEWRIISQLAIEPGIPASRICQVIGFDKGPVS 60
           VPAFITFI NKLSNSATAFYQ NFGVNVTEWRI+S LAIEPGI A+RICQVIGF+KGPVS
Sbjct: 31  VPAFITFIANKLSNSATAFYQGNFGVNVTEWRIMSLLAIEPGISAARICQVIGFNKGPVS 90

Query: 61  RNLAALQKRGLLTIRTAPDDGRTHSITLTARGRAIHDKVIVAALERERRLLACLKKDERE 120
           R L+ +Q RGL+TIR  P+D RTHSI+LT +GRA HDKVIVAALERER+L++CL  DE+E
Sbjct: 91  RTLSDMQSRGLITIRVDPNDARTHSISLTGKGRATHDKVIVAALERERKLMSCLSADEQE 150

Query: 121 VLIELLRRLHENLGAVTGQST 141
           VLI+LLRRLH NLGAVTG++T
Sbjct: 151 VLIDLLRRLHNNLGAVTGETT 171


>ref|YP_487218.1| MarR family transcriptional regulator [Rhodopseudomonas palustris
           HaA2]
 gb|ABD08307.1| transcriptional regulator, MarR family [Rhodopseudomonas palustris
           HaA2]
          Length = 171

 Score =  234 bits (596), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 110/139 (79%), Positives = 126/139 (90%)

Query: 1   VPAFITFIGNKLSNSATAFYQKNFGVNVTEWRIISQLAIEPGIPASRICQVIGFDKGPVS 60
           VPAFITFI NKLSNSATAFYQ +FGVNVTEWR++S LAIEPGI A+RIC+VIGF+KGPVS
Sbjct: 31  VPAFITFIANKLSNSATAFYQGHFGVNVTEWRMMSLLAIEPGISAARICEVIGFNKGPVS 90

Query: 61  RNLAALQKRGLLTIRTAPDDGRTHSITLTARGRAIHDKVIVAALERERRLLACLKKDERE 120
           R LA +Q+RGL+ IRT PDDGRTHSI+LTA+GRA HDKVIVAALERERRL++CL K E+E
Sbjct: 91  RTLADMQQRGLIAIRTDPDDGRTHSISLTAKGRATHDKVIVAALERERRLMSCLNKSEQE 150

Query: 121 VLIELLRRLHENLGAVTGQ 139
           VLI+LLRRLH+NL AVTG 
Sbjct: 151 VLIDLLRRLHDNLDAVTGD 169


>ref|YP_001236899.1| MarR/EmrR family transcriptional regulator [Bradyrhizobium sp.
           BTAi1]
 gb|ABQ32993.1| putative transcriptional regulator, MarR/EmrR family
           [Bradyrhizobium sp. BTAi1]
          Length = 168

 Score =  234 bits (596), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 112/140 (80%), Positives = 124/140 (88%)

Query: 1   VPAFITFIGNKLSNSATAFYQKNFGVNVTEWRIISQLAIEPGIPASRICQVIGFDKGPVS 60
           VPAFITFI NKLSNSATAFYQ NFGVNVTEWRI+S LAIEPGIPASRIC VIGFDKGPVS
Sbjct: 29  VPAFITFIANKLSNSATAFYQLNFGVNVTEWRIMSLLAIEPGIPASRICSVIGFDKGPVS 88

Query: 61  RNLAALQKRGLLTIRTAPDDGRTHSITLTARGRAIHDKVIVAALERERRLLACLKKDERE 120
           R LA ++ RGL+ IR  P DGR+HSI+LTA+GRA HDKVIVAALERERRLLACL K+E+E
Sbjct: 89  RTLALMKDRGLIAIRNDPQDGRSHSISLTAKGRATHDKVIVAALERERRLLACLDKNEQE 148

Query: 121 VLIELLRRLHENLGAVTGQS 140
           +LI LLRR+H+NL AVTG S
Sbjct: 149 MLIALLRRIHDNLDAVTGAS 168


>ref|YP_001991074.1| MarR family transcriptional regulator [Rhodopseudomonas palustris
           TIE-1]
 gb|ACF00599.1| transcriptional regulator, MarR family [Rhodopseudomonas palustris
           TIE-1]
          Length = 171

 Score =  233 bits (594), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 109/141 (77%), Positives = 126/141 (89%)

Query: 1   VPAFITFIGNKLSNSATAFYQKNFGVNVTEWRIISQLAIEPGIPASRICQVIGFDKGPVS 60
           VPAFITFI NKLSNSATAFYQ NFGVNVTEWRI+S LAIEPGI A+RIC+VIGF+KGPVS
Sbjct: 31  VPAFITFIANKLSNSATAFYQGNFGVNVTEWRIMSLLAIEPGISAARICRVIGFNKGPVS 90

Query: 61  RNLAALQKRGLLTIRTAPDDGRTHSITLTARGRAIHDKVIVAALERERRLLACLKKDERE 120
           R L+ +Q RGL+TIR  P+D RTHSI+LT +GRA HDKVIVAALERER+L++CL  DE+E
Sbjct: 91  RTLSDMQSRGLITIRVDPNDARTHSISLTGKGRATHDKVIVAALERERKLMSCLSADEQE 150

Query: 121 VLIELLRRLHENLGAVTGQST 141
           VLI+LLRRLH NLGAVTG++T
Sbjct: 151 VLIDLLRRLHNNLGAVTGETT 171