BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0087.0027.p (279 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773561.1| multidrag resistance protein [Bradyrhizobium ja... 398 e-109 ref|NP_522976.1| transmembrane efflux transmembrane protein [Ral... 288 8e-76 gb|AEG71571.1| multidrug resistance protein b (translocase) [Ral... 273 2e-71 ref|ZP_06908230.1| transmembrane efflux transmembrane protein [S... 248 9e-64 ref|YP_004018325.1| drug resistance transporter EmrB/QacA subfam... 230 2e-58 >ref|NP_773561.1| multidrag resistance protein [Bradyrhizobium japonicum USDA 110] dbj|BAC52186.1| blr6921 [Bradyrhizobium japonicum USDA 110] Length = 468 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 227/286 (79%), Positives = 248/286 (86%), Gaps = 7/286 (2%) Query: 1 VIARLRENFGPTAPLDITGLTLVALAALALVWGLLRGNGVGWASAEVAGALIAGAALAVM 60 V+ARLRE+FGP A LDI GL+LVALAALALVW LLRGN VGWASAEV G L++G LA Sbjct: 183 VLARLRESFGPAAALDIPGLSLVALAALALVWSLLRGNAVGWASAEVMGTLMSGLVLAAG 242 Query: 61 FVLWELRATSPMVPMRLFATRPFASGMAASVLFYAAMYGVLFLLPQFLQIALGFDAFGAG 120 FV WELRA +PMVPMRLFA+R ASGM+ASVLFYAAMYGV+FLLPQFLQ LGFDAFGAG Sbjct: 243 FVFWELRAAAPMVPMRLFASRALASGMSASVLFYAAMYGVVFLLPQFLQTTLGFDAFGAG 302 Query: 121 LRLLPWTATLFVTAPIAGAAVNRFGERTLVVAGLLMQAIGLGWISEIVSPTVPYSALVAP 180 LRLLPWTATLFVTAP+AGA VNRFGER LVV GLLMQAIGLGWI+EIV+P VPYSALVAP Sbjct: 303 LRLLPWTATLFVTAPVAGAVVNRFGERPLVVTGLLMQAIGLGWIAEIVNPAVPYSALVAP 362 Query: 181 LVLAGVGVSMAMPAAQNAVLGAVAVSEMGKASGVFNMGRFVGGMFGIAALVASFSANGAA 240 LVLAGVGVSMAMPAAQNA+L +V V+EMGKASGVFNMGRF+GGMFGIAALVA+FSANG A Sbjct: 363 LVLAGVGVSMAMPAAQNAILSSVTVAEMGKASGVFNMGRFLGGMFGIAALVATFSANGGA 422 Query: 241 DSSGHFANGFASAMSLAATLSFAGAVAGLFLP-------MRRPQDA 279 S+ HF +GFA+AMSLAATLS AGA+AGLFLP PQDA Sbjct: 423 YSAAHFESGFAAAMSLAATLSLAGAIAGLFLPARRRIAGAAAPQDA 468 >ref|NP_522976.1| transmembrane efflux transmembrane protein [Ralstonia solanacearum GMI1000] emb|CAD18568.1| probable transmembrane efflux transmembrane protein [Ralstonia solanacearum GMI1000] Length = 467 Score = 288 bits (736), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 152/274 (55%), Positives = 189/274 (68%) Query: 2 IARLRENFGPTAPLDITGLTLVALAALALVWGLLRGNGVGWASAEVAGALIAGAALAVMF 61 + R+ ++ GP A LDI G LV A++ LVWGL+RG+ GW+ +E AL+ GAA + F Sbjct: 184 VRRIPDSKGPAAALDIPGALLVMGASIGLVWGLMRGSSKGWSDSEAPLALVVGAAFMICF 243 Query: 62 VLWELRATSPMVPMRLFATRPFASGMAASVLFYAAMYGVLFLLPQFLQIALGFDAFGAGL 121 VLWE RA PM+PMRLFA+R F+SG+AA LFYA MYGV+F LPQF Q A G D F AGL Sbjct: 244 VLWERRAKHPMIPMRLFASRAFSSGIAACFLFYAGMYGVVFFLPQFFQSAQGHDPFAAGL 303 Query: 122 RLLPWTATLFVTAPIAGAAVNRFGERTLVVAGLLMQAIGLGWISEIVSPTVPYSALVAPL 181 RLLPWT TLF AP+AG+ V+R GER+++V GLL+QAIG WI+ SP Y LVAPL Sbjct: 304 RLLPWTVTLFFIAPLAGSMVDRIGERSVMVTGLLLQAIGFAWIAWAASPGTSYLNLVAPL 363 Query: 182 VLAGVGVSMAMPAAQNAVLGAVAVSEMGKASGVFNMGRFVGGMFGIAALVASFSANGAAD 241 V++G G+SMA PAAQ AVLGAV V ++GKASGVFNM R +GG GIA V +FS G Sbjct: 364 VISGAGISMAGPAAQKAVLGAVTVQDIGKASGVFNMFRILGGATGIAIAVVAFSIWGNLG 423 Query: 242 SSGHFANGFASAMSLAATLSFAGAVAGLFLPMRR 275 S F+ GFA M + A LS A ++ + P R Sbjct: 424 SEKDFSEGFAHVMGVCAVLSMAAVLSATWQPTHR 457 >gb|AEG71571.1| multidrug resistance protein b (translocase) [Ralstonia solanacearum Po82] Length = 468 Score = 273 bits (698), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 146/261 (55%), Positives = 178/261 (68%) Query: 1 VIARLRENFGPTAPLDITGLTLVALAALALVWGLLRGNGVGWASAEVAGALIAGAALAVM 60 VI R+ E+ GP LDI G LV A++ L+WGL+RG+ GW+ +E AL GAA + Sbjct: 183 VIRRIPESKGPAVSLDIPGALLVMGASIGLIWGLMRGSNTGWSDSEAPLALGIGAAFTIC 242 Query: 61 FVLWELRATSPMVPMRLFATRPFASGMAASVLFYAAMYGVLFLLPQFLQIALGFDAFGAG 120 FV WE RA PMVPMRLF++R F+SG+ A LFYA MYGV+F LPQF Q A G AG Sbjct: 243 FVWWERRAKHPMVPMRLFSSRTFSSGIGACFLFYAGMYGVVFFLPQFFQSAQGHGPLAAG 302 Query: 121 LRLLPWTATLFVTAPIAGAAVNRFGERTLVVAGLLMQAIGLGWISEIVSPTVPYSALVAP 180 LRLLPWTATLF AP+AG V+R GER ++VAGLL+Q IG WI+ + SP Y LV P Sbjct: 303 LRLLPWTATLFFIAPVAGNMVDRIGERPVMVAGLLLQTIGFAWIAWVASPGTAYLNLVVP 362 Query: 181 LVLAGVGVSMAMPAAQNAVLGAVAVSEMGKASGVFNMGRFVGGMFGIAALVASFSANGAA 240 L +AG G+SMA PAAQ AVLGAVA+ E+GKASG+FNM R +GG GIA V +FS G+ Sbjct: 363 LAVAGAGISMAGPAAQKAVLGAVAMQEIGKASGIFNMARILGGATGIAIAVVAFSIWGSL 422 Query: 241 DSSGHFANGFASAMSLAATLS 261 S F+ GFA M + A LS Sbjct: 423 GSDRDFSEGFAHVMVICAALS 443 >ref|ZP_06908230.1| transmembrane efflux transmembrane protein [Streptomyces pristinaespiralis ATCC 25486] gb|EDY66212.1| transmembrane efflux transmembrane protein [Streptomyces pristinaespiralis ATCC 25486] Length = 521 Score = 248 bits (632), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 131/273 (47%), Positives = 176/273 (64%) Query: 4 RLRENFGPTAPLDITGLTLVALAALALVWGLLRGNGVGWASAEVAGALIAGAALAVMFVL 63 R+ E+ GP D G+ LV L A +VW L+R N GW+SAEV GAL+ G AL FVL Sbjct: 181 RVEESVGPNTRFDQPGVVLVTLGAFGIVWALVRANAAGWSSAEVLGALVLGVALLAAFVL 240 Query: 64 WELRATSPMVPMRLFATRPFASGMAASVLFYAAMYGVLFLLPQFLQIALGFDAFGAGLRL 123 WE R +PM+PMR F +R FA+ A+ L +A++YG LF L Q+ Q LG GAGLRL Sbjct: 241 WERRTKAPMLPMRFFRSRAFATANPANFLVFASLYGTLFFLAQYFQTVLGEGPLGAGLRL 300 Query: 124 LPWTATLFVTAPIAGAAVNRFGERTLVVAGLLMQAIGLGWISEIVSPTVPYSALVAPLVL 183 +PWTATL + APIAG +RFGER VV GL +Q +G WI+ + Y L+ L++ Sbjct: 301 MPWTATLMICAPIAGRWADRFGERWFVVGGLSLQTVGATWIAVVADTDTGYPELLPALII 360 Query: 184 AGVGVSMAMPAAQNAVLGAVAVSEMGKASGVFNMGRFVGGMFGIAALVASFSANGAADSS 243 G G++MAMPAAQ AV+G+V +E+G+ASG F M R +GG+FG+A VA F+ G S+ Sbjct: 361 GGAGLTMAMPAAQKAVVGSVRPNEIGQASGAFMMLRILGGVFGVAVSVAVFAGVGGYGSA 420 Query: 244 GHFANGFASAMSLAATLSFAGAVAGLFLPMRRP 276 F++GF++AM A +FAG + L +P RP Sbjct: 421 AEFSDGFSAAMGAVAVFAFAGMLVALGIPGGRP 453 >ref|YP_004018325.1| drug resistance transporter EmrB/QacA subfamily [Frankia sp. EuI1c] gb|ADP82455.1| drug resistance transporter, EmrB/QacA subfamily [Frankia sp. EuI1c] Length = 498 Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 126/273 (46%), Positives = 172/273 (63%) Query: 2 IARLRENFGPTAPLDITGLTLVALAALALVWGLLRGNGVGWASAEVAGALIAGAALAVMF 61 IARLRE+FGP + LDI GL L A + WGL+R N VGWAS + GAL AG L F Sbjct: 213 IARLRESFGPRSQLDIVGLLLAAAGFFGITWGLIRTNRVGWASGQTIGALAAGIVLVGAF 272 Query: 62 VLWELRATSPMVPMRLFATRPFASGMAASVLFYAAMYGVLFLLPQFLQIALGFDAFGAGL 121 ++WE R +PM+ ++LF +R F + S YA+++GVLFL+ QFLQ LG+ AGL Sbjct: 273 LVWERRTATPMLSVQLFRSRAFNAANGVSFFMYASLFGVLFLMMQFLQTGLGYSPLAAGL 332 Query: 122 RLLPWTATLFVTAPIAGAAVNRFGERTLVVAGLLMQAIGLGWISEIVSPTVPYSALVAPL 181 R LPWT V AP+AGA +RFG R ++AGL +QA+GLGWI+ I P + Y L L Sbjct: 333 RTLPWTGAPMVVAPLAGALADRFGNRPFLIAGLALQAVGLGWIAAIAEPGMSYRWLAVAL 392 Query: 182 VLAGVGVSMAMPAAQNAVLGAVAVSEMGKASGVFNMGRFVGGMFGIAALVASFSANGAAD 241 +AGVG+S+ P NAV+G+V +EMG ASG + R +GG+FG+A L + F+ +G Sbjct: 393 AVAGVGISLCFPTVANAVVGSVPPAEMGVASGTNSAVREIGGVFGVAILASVFAGSGVYT 452 Query: 242 SSGHFANGFASAMSLAATLSFAGAVAGLFLPMR 274 S+ F + FA+A+ + A S G +A +P R Sbjct: 453 STRTFVDHFATALWIGAAFSAVGILAAAAVPGR 485