BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0087.0026.p         (102 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773560.1| hypothetical protein bll6920 [Bradyrhizobium ja...   180   6e-44
ref|YP_004612132.1| hypothetical protein Mesop_3596 [Mesorhizobi...   120   7e-26
ref|NP_103059.1| hypothetical protein mlr1480 [Mesorhizobium lot...   120   1e-25
ref|YP_004406627.1| hypothetical protein VAB18032_24645 [Verruco...   100   8e-20
ref|YP_001237681.1| hypothetical protein BBta_1559 [Bradyrhizobi...    83   1e-14

>ref|NP_773560.1| hypothetical protein bll6920 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52185.1| bll6920 [Bradyrhizobium japonicum USDA 110]
          Length = 102

 Score =  180 bits (457), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 87/101 (86%), Positives = 91/101 (90%)

Query: 1   MRRTLIRYKAKPEMAEKNAALVSAVFAELKAAKPDGVRYLTLRLEDDTFIHVVETAAEDG 60
           MRRTLIRYK KPE+A++NA LV+AVFAELKA  PDGVRYLTLRLEDDTFIH VE AAEDG
Sbjct: 1   MRRTLIRYKTKPELADRNAELVAAVFAELKAESPDGVRYLTLRLEDDTFIHFVEAAAEDG 60

Query: 61  SSPIPKLAAFQAFQDGIRDRCAEPPLVRSAVIVGNYRMLDE 101
           SSPIPKL AFQAFQDGIRDRCAEPPLVR   IVGNYRMLDE
Sbjct: 61  SSPIPKLRAFQAFQDGIRDRCAEPPLVRDVRIVGNYRMLDE 101


>ref|YP_004612132.1| hypothetical protein Mesop_3596 [Mesorhizobium opportunistum
           WSM2075]
 gb|AEH88038.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 101

 Score =  120 bits (301), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 57/100 (57%), Positives = 71/100 (71%)

Query: 1   MRRTLIRYKAKPEMAEKNAALVSAVFAELKAAKPDGVRYLTLRLEDDTFIHVVETAAEDG 60
           M+R LIRYK KPE A++N  LV AVF EL    P+GVRY+TLR  D TF+H+VET  +  
Sbjct: 1   MKRHLIRYKTKPERADENERLVKAVFQELHDKSPNGVRYMTLRSGDGTFVHLVETQTDAH 60

Query: 61  SSPIPKLAAFQAFQDGIRDRCAEPPLVRSAVIVGNYRMLD 100
           +  I  LAAF+AFQ+GIRDRC+E P      +VG+YRMLD
Sbjct: 61  ADIITGLAAFEAFQNGIRDRCSERPQRDEMTVVGSYRMLD 100


>ref|NP_103059.1| hypothetical protein mlr1480 [Mesorhizobium loti MAFF303099]
 dbj|BAB48845.1| mlr1480 [Mesorhizobium loti MAFF303099]
          Length = 116

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/100 (56%), Positives = 69/100 (69%)

Query: 1   MRRTLIRYKAKPEMAEKNAALVSAVFAELKAAKPDGVRYLTLRLEDDTFIHVVETAAEDG 60
           M+R LIRYK KPE A++N  L+ AVF EL+   PDGVRY+TLR  D TFIH+VET  +  
Sbjct: 16  MKRQLIRYKMKPERADENERLIQAVFQELRDKSPDGVRYMTLRAADGTFIHLVETQTDAH 75

Query: 61  SSPIPKLAAFQAFQDGIRDRCAEPPLVRSAVIVGNYRMLD 100
           S  I  LA F+AFQ G  DRC+EPP      ++G+YRMLD
Sbjct: 76  SDSITGLATFKAFQRGFGDRCSEPPQRDEMAVIGSYRMLD 115


>ref|YP_004406627.1| hypothetical protein VAB18032_24645 [Verrucosispora maris
           AB-18-032]
 gb|AEB46027.1| hypothetical protein VAB18032_24645 [Verrucosispora maris
           AB-18-032]
          Length = 101

 Score =  100 bits (249), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 52/102 (50%), Positives = 68/102 (66%), Gaps = 4/102 (3%)

Query: 1   MRRT-LIRYKAKPEMAEKNAALVSAVFAELKAAKPDGVRYLTLRLEDDT-FIHVVETAAE 58
           MR+T +IRY  +PE+A++NA LV  VFAEL   +P G+ Y T RL D T F+HV+   AE
Sbjct: 1   MRQTTVIRYTTRPEVADENAKLVEDVFAELAQTRPAGLHYATFRLGDGTEFMHVL--VAE 58

Query: 59  DGSSPIPKLAAFQAFQDGIRDRCAEPPLVRSAVIVGNYRMLD 100
           +GS+ +   AAFQ FQ+GIR RCA PP    A +VG+Y   D
Sbjct: 59  EGSTALTDTAAFQRFQEGIRSRCAAPPQFEQATVVGSYGFGD 100


>ref|YP_001237681.1| hypothetical protein BBta_1559 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33775.1| hypothetical protein BBta_1559 [Bradyrhizobium sp. BTAi1]
          Length = 354

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 58/99 (58%), Gaps = 8/99 (8%)

Query: 1   MRRTLIRYKAKPEMAEKNAALVSAVFAELKAAKPDGVRYLTLRLEDDTFIHVVETAAEDG 60
           M+  ++RYK KPE AE+N  L+  VFAEL A  P G++YL LRLEDD+F+H+   A    
Sbjct: 253 MKTVVVRYKVKPEKAEENQRLIQEVFAELGAKAPVGLQYLVLRLEDDSFVHLASVA---- 308

Query: 61  SSPIPKLAAFQAFQDGIRD---RCAEPPLVRSAVIVGNY 96
               P+LA F  FQ   RD   R    P   SA I+GNY
Sbjct: 309 -DNAPQLATFSTFQRFRRDAEARRLTAPESHSATIIGNY 346