BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0087.0016.p         (93 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767707.1| ABC transporter ATP-binding protein [Bradyrhizo...   171   2e-41
ref|YP_001236907.1| branched chain amino acid ABC transporter AT...   168   2e-40
ref|YP_001208612.1| branched chain amino acid ABC transporter AT...   167   4e-40
ref|ZP_07660755.1| ABC transporter ATP-binding protein [Roseibiu...   145   2e-33
dbj|BAB32462.1| probable ABC transporter subunit [Pseudomonas sp...   139   2e-31

>ref|NP_767707.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC46332.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
          Length = 237

 Score =  171 bits (434), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 80/93 (86%), Positives = 90/93 (96%)

Query: 1   MLAIGRALMTNPKLLILDEATEGLAPLIRDEIWSCLSMLKGRGQSVLVIDKNVGNLARIA 60
           MLAIGRALMTNPKLLILDEATEGLAPLIR+EIW+CLS+LK RGQS+LV+DKNV +LARI 
Sbjct: 145 MLAIGRALMTNPKLLILDEATEGLAPLIREEIWNCLSLLKSRGQSILVVDKNVDHLARIC 204

Query: 61  DRHYIIERGKTVWSGTSEQLIAEPDLQHKYLGI 93
           DRH+IIERGKTVWSGTS++L+AEPDLQHKYLGI
Sbjct: 205 DRHFIIERGKTVWSGTSDELMAEPDLQHKYLGI 237


>ref|YP_001236907.1| branched chain amino acid ABC transporter ATP-binding protein
           [Bradyrhizobium sp. BTAi1]
 gb|ABQ33001.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 234

 Score =  168 bits (426), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/93 (84%), Positives = 88/93 (94%)

Query: 1   MLAIGRALMTNPKLLILDEATEGLAPLIRDEIWSCLSMLKGRGQSVLVIDKNVGNLARIA 60
           MLAIGRALMTNPKLLILDEATEGLAPLIR+EIW+CLS+LK RGQS+LVIDKNV +L RI 
Sbjct: 142 MLAIGRALMTNPKLLILDEATEGLAPLIREEIWNCLSLLKSRGQSILVIDKNVEHLTRIC 201

Query: 61  DRHYIIERGKTVWSGTSEQLIAEPDLQHKYLGI 93
           DRHYIIERG+TVW GTSEQL+AEP+LQH+YLGI
Sbjct: 202 DRHYIIERGRTVWHGTSEQLMAEPELQHRYLGI 234


>ref|YP_001208612.1| branched chain amino acid ABC transporter ATP-binding protein
           [Bradyrhizobium sp. ORS 278]
 emb|CAL80397.1| Putative branched-chain amino acid ABC transporter, ATP-binding
           protein [Bradyrhizobium sp. ORS 278]
          Length = 234

 Score =  167 bits (424), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 79/93 (84%), Positives = 88/93 (94%)

Query: 1   MLAIGRALMTNPKLLILDEATEGLAPLIRDEIWSCLSMLKGRGQSVLVIDKNVGNLARIA 60
           MLAIGRALMTNPKLLILDEATEGLAPLIR+EIW+CLS+LK RGQS+LVIDKNV +L RI 
Sbjct: 142 MLAIGRALMTNPKLLILDEATEGLAPLIREEIWNCLSLLKTRGQSILVIDKNVEHLTRIC 201

Query: 61  DRHYIIERGKTVWSGTSEQLIAEPDLQHKYLGI 93
           DRHYIIERG+TVW GTSEQL+AEP+LQH+YLGI
Sbjct: 202 DRHYIIERGRTVWHGTSEQLMAEPELQHRYLGI 234


>ref|ZP_07660755.1| ABC transporter ATP-binding protein [Roseibium sp. TrichSKD4]
 gb|EFO30517.1| ABC transporter ATP-binding protein [Roseibium sp. TrichSKD4]
          Length = 236

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/92 (72%), Positives = 78/92 (84%)

Query: 1   MLAIGRALMTNPKLLILDEATEGLAPLIRDEIWSCLSMLKGRGQSVLVIDKNVGNLARIA 60
           MLAIGRALMTNPKLLILDEATEGLAP+IR EIWSCL  LK  GQS+L++DK V  L R+A
Sbjct: 144 MLAIGRALMTNPKLLILDEATEGLAPIIRGEIWSCLKSLKETGQSILIVDKTVAALERLA 203

Query: 61  DRHYIIERGKTVWSGTSEQLIAEPDLQHKYLG 92
           DRH I+E+GKTVW+G SE+LI  PDL+ +YLG
Sbjct: 204 DRHVILEKGKTVWAGNSEELIGTPDLKSRYLG 235


>dbj|BAB32462.1| probable ABC transporter subunit [Pseudomonas sp. CA10]
          Length = 229

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/93 (64%), Positives = 78/93 (83%)

Query: 1   MLAIGRALMTNPKLLILDEATEGLAPLIRDEIWSCLSMLKGRGQSVLVIDKNVGNLARIA 60
           ML + RALMTNP+LLILDEATEGLAP+IR+ IW+CL+ LK  G+++LVIDKN+  +AR+ 
Sbjct: 137 MLVVARALMTNPQLLILDEATEGLAPVIRETIWNCLATLKAEGETILVIDKNLKEMARVV 196

Query: 61  DRHYIIERGKTVWSGTSEQLIAEPDLQHKYLGI 93
           DRH+IIE+G+ VW GT EQL A P+L H+YLG+
Sbjct: 197 DRHHIIEKGRQVWQGTPEQLAATPELSHRYLGV 229