BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0087.0012.p         (80 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767710.1| dioxygenase [Bradyrhizobium japonicum USDA 110]...   142   2e-32
ref|ZP_08630885.1| hypothetical protein CSIRO_3995 [Bradyrhizobi...   138   3e-31
ref|NP_946334.1| phthalate dioxygenase [Rhodopseudomonas palustr...   135   2e-30
ref|YP_001990190.1| phthalate 4,5-dioxygenase [Rhodopseudomonas ...   135   2e-30
ref|YP_004107494.1| Rieske (2Fe-2S) iron-sulfur domain [Rhodopse...   132   2e-29

>ref|NP_767710.1| dioxygenase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46335.1| bll1070 [Bradyrhizobium japonicum USDA 110]
          Length = 452

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 66/79 (83%), Positives = 71/79 (89%)

Query: 1   VDELDGPRPVRPVRLLGENLVLFRGEDGSYGLIDRHCAHRGADLAFGRLENGGLRCAFHG 60
           VDEL+G RP+RPVRLLGENLVLFR E G YGLIDRHCAHRGADLAFGRLE+GGLRCAFHG
Sbjct: 33  VDELEGARPIRPVRLLGENLVLFRDERGRYGLIDRHCAHRGADLAFGRLEHGGLRCAFHG 92

Query: 61  WLFDTSGQCIETPAGPAGA 79
           WLFD +GQCIETPA P  +
Sbjct: 93  WLFDATGQCIETPAEPKDS 111


>ref|ZP_08630885.1| hypothetical protein CSIRO_3995 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP06417.1| hypothetical protein CSIRO_3995 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 452

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/80 (80%), Positives = 68/80 (85%)

Query: 1   VDELDGPRPVRPVRLLGENLVLFRGEDGSYGLIDRHCAHRGADLAFGRLENGGLRCAFHG 60
           VDEL+GPRPVR VRLLGEN VLFR E G YGL+DR C HRGADLAFGRLENGGLRCAFHG
Sbjct: 33  VDELEGPRPVRAVRLLGENFVLFRDEQGRYGLMDRDCPHRGADLAFGRLENGGLRCAFHG 92

Query: 61  WLFDTSGQCIETPAGPAGAV 80
           WLFD  G C+ETPA P G+V
Sbjct: 93  WLFDVQGNCLETPAEPVGSV 112


>ref|NP_946334.1| phthalate dioxygenase [Rhodopseudomonas palustris CGA009]
 emb|CAE26426.1| possible phthalate dioxygenase [Rhodopseudomonas palustris CGA009]
          Length = 452

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/79 (78%), Positives = 70/79 (88%)

Query: 1   VDELDGPRPVRPVRLLGENLVLFRGEDGSYGLIDRHCAHRGADLAFGRLENGGLRCAFHG 60
           VDEL+G RP++PVRLLGE+LVLF+ E G YGLIDR C HRGADLAFGRLENGGLRCAFHG
Sbjct: 33  VDELEGERPIKPVRLLGEDLVLFKDETGRYGLIDRDCPHRGADLAFGRLENGGLRCAFHG 92

Query: 61  WLFDTSGQCIETPAGPAGA 79
           WLFD  G+CI+TPA PAG+
Sbjct: 93  WLFDVDGKCIDTPAEPAGS 111


>ref|YP_001990190.1| phthalate 4,5-dioxygenase [Rhodopseudomonas palustris TIE-1]
 gb|ACE99714.1| Phthalate 4,5-dioxygenase [Rhodopseudomonas palustris TIE-1]
          Length = 452

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/79 (78%), Positives = 70/79 (88%)

Query: 1   VDELDGPRPVRPVRLLGENLVLFRGEDGSYGLIDRHCAHRGADLAFGRLENGGLRCAFHG 60
           VDEL+G RP++PVRLLGE+LVLF+ E G YGLIDR C HRGADLAFGRLENGGLRCAFHG
Sbjct: 33  VDELEGERPIKPVRLLGEDLVLFKDETGRYGLIDRDCPHRGADLAFGRLENGGLRCAFHG 92

Query: 61  WLFDTSGQCIETPAGPAGA 79
           WLFD  G+CI+TPA PAG+
Sbjct: 93  WLFDVDGKCIDTPAEPAGS 111


>ref|YP_004107494.1| Rieske (2Fe-2S) iron-sulfur domain [Rhodopseudomonas palustris
           DX-1]
 gb|ADU42761.1| Rieske (2Fe-2S) iron-sulfur domain [Rhodopseudomonas palustris
           DX-1]
          Length = 452

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/79 (75%), Positives = 68/79 (86%)

Query: 1   VDELDGPRPVRPVRLLGENLVLFRGEDGSYGLIDRHCAHRGADLAFGRLENGGLRCAFHG 60
           VDEL+G RP++PVRLLGE+LVLF+ E+G YGLIDR C HRGADLAFGRLENGGLRCAFHG
Sbjct: 33  VDELEGERPIKPVRLLGEDLVLFKDENGRYGLIDRDCPHRGADLAFGRLENGGLRCAFHG 92

Query: 61  WLFDTSGQCIETPAGPAGA 79
           WLFD  G C +TPA P G+
Sbjct: 93  WLFDVDGNCTDTPAEPVGS 111