BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0087.0004.p (335 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_578603.1| KpsF/GutQ family protein [Nitrobacter hamburgen... 540 e-151 ref|YP_568003.1| KpsF/GutQ family protein [Rhodopseudomonas palu... 537 e-150 ref|YP_317545.1| sugar isomerase, KpsF/GutQ family protein [Nitr... 534 e-150 ref|YP_488133.1| KpsF/GutQ family protein [Rhodopseudomonas palu... 532 e-149 ref|YP_530659.1| KpsF/GutQ family protein [Rhodopseudomonas palu... 528 e-148 >ref|YP_578603.1| KpsF/GutQ family protein [Nitrobacter hamburgensis X14] gb|ABE64143.1| KpsF/GutQ family protein [Nitrobacter hamburgensis X14] Length = 325 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 266/320 (83%), Positives = 290/320 (90%) Query: 16 DGAVQSALRTLDAEASGVAALSAALKSDLGAPFAAASELIGNAKGRLIVTGLGKSGHIGR 75 + A++SALRT +AEA GV AL+A+LKSDLG FAAA+++I AKGRLIVTGLGKSGHIGR Sbjct: 6 NAAIESALRTFEAEAGGVTALAASLKSDLGPAFAAAADMIRKAKGRLIVTGLGKSGHIGR 65 Query: 76 KIAATFASTGTPAFFVHAAEASHGDLGMITIDDVILALSWSGEQPEMRNLIAYAARFGIP 135 KIAATFASTGTPAFFVHAAEASHGDLGMIT DDVI+ALSWSGEQPEM+NLI YA RF I Sbjct: 66 KIAATFASTGTPAFFVHAAEASHGDLGMITADDVIMALSWSGEQPEMKNLITYAKRFRIA 125 Query: 136 LIAMTADKDSTLSKAADVQLTLPKAREACPHNLAPTTSSLMMLALGDALAIALLEGRGFT 195 LIAMTA++DSTL KAADV L P+AREACPHNLAPTTSSLM LALGDALAIALLEGRGFT Sbjct: 126 LIAMTAERDSTLGKAADVVLVQPRAREACPHNLAPTTSSLMQLALGDALAIALLEGRGFT 185 Query: 196 STDFSVLHPGGKLGALLKYARDLMHGGDALPLKPLGTKMSDALVEMTSKGFGCVGIVDRH 255 S DFSVLHPGGKLGALLKY RDLMH GDA+PL+PLGTKMSDALVEMTSKGFGCVG++D H Sbjct: 186 SVDFSVLHPGGKLGALLKYTRDLMHSGDAIPLRPLGTKMSDALVEMTSKGFGCVGVIDGH 245 Query: 256 GHLVGIVTDGDLRRQMRPDLLTRSVDEVMTRTPKTISRDTLAGEVLELLNASKITTLIVT 315 GHLVGIVTDGDLRR MRPDL+T VD+VMT+ PKTI RD LAGEVLE+LN+SKIT LIVT Sbjct: 246 GHLVGIVTDGDLRRHMRPDLMTVRVDDVMTKNPKTIGRDLLAGEVLEILNSSKITALIVT 305 Query: 316 DAKKPVGIIHLHDLLRAGVA 335 D KKPVGI+HLHDLLRAGVA Sbjct: 306 DGKKPVGIVHLHDLLRAGVA 325 >ref|YP_568003.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisB5] gb|ABE38102.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisB5] Length = 336 Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust. Identities = 268/336 (79%), Positives = 298/336 (88%), Gaps = 1/336 (0%) Query: 1 MAKPKPLMTKSSGPDDGA-VQSALRTLDAEASGVAALSAALKSDLGAPFAAASELIGNAK 59 MA KP +TKS+ D A + SALRTL+AEA GV AL+AAL+SDLG F AA E+I NAK Sbjct: 1 MALSKPNITKSAMTDSAAAIPSALRTLEAEADGVTALAAALQSDLGGAFVAAIEMIRNAK 60 Query: 60 GRLIVTGLGKSGHIGRKIAATFASTGTPAFFVHAAEASHGDLGMITIDDVILALSWSGEQ 119 GRLI+TGLGKSGHIGRKIAATFASTGTPAFFVHA+EASHGDLGMIT DD+ILA+SWSGEQ Sbjct: 61 GRLIITGLGKSGHIGRKIAATFASTGTPAFFVHASEASHGDLGMITADDIILAMSWSGEQ 120 Query: 120 PEMRNLIAYAARFGIPLIAMTADKDSTLSKAADVQLTLPKAREACPHNLAPTTSSLMMLA 179 PEM+NLI YA+RF I LIAMT+D STL+KAAD+ LTLPKAREACPHNLAPTTSSLMMLA Sbjct: 121 PEMKNLITYASRFKIALIAMTSDNGSTLAKAADISLTLPKAREACPHNLAPTTSSLMMLA 180 Query: 180 LGDALAIALLEGRGFTSTDFSVLHPGGKLGALLKYARDLMHGGDALPLKPLGTKMSDALV 239 LGDA+AIALLE RGFTSTDFSVLHPGGKLGA+LKYARDLMH G+A+PLKPLGTKMSDALV Sbjct: 181 LGDAIAIALLESRGFTSTDFSVLHPGGKLGAMLKYARDLMHTGEAIPLKPLGTKMSDALV 240 Query: 240 EMTSKGFGCVGIVDRHGHLVGIVTDGDLRRQMRPDLLTRSVDEVMTRTPKTISRDTLAGE 299 EM++KGFGCVGIVD +G + GIVTDGDLRR MRPDL+T VDEVMT+ PKTIS LAGE Sbjct: 241 EMSAKGFGCVGIVDANGQIAGIVTDGDLRRHMRPDLMTAIVDEVMTKRPKTISPGLLAGE 300 Query: 300 VLELLNASKITTLIVTDAKKPVGIIHLHDLLRAGVA 335 LELLN+SKIT L+VT+ KKPVGI+HLHDLLRAGVA Sbjct: 301 TLELLNSSKITALLVTEGKKPVGIVHLHDLLRAGVA 336 >ref|YP_317545.1| sugar isomerase, KpsF/GutQ family protein [Nitrobacter winogradskyi Nb-255] gb|ABA04193.1| Sugar isomerase, KpsF/GutQ family protein [Nitrobacter winogradskyi Nb-255] Length = 325 Score = 534 bits (1376), Expect = e-150, Method: Compositional matrix adjust. Identities = 266/318 (83%), Positives = 287/318 (90%) Query: 18 AVQSALRTLDAEASGVAALSAALKSDLGAPFAAASELIGNAKGRLIVTGLGKSGHIGRKI 77 A++SALRT +AEA GV+AL+AALKSDLG FAAA++LI NAKGRLIVTGLGKSGHIGRKI Sbjct: 8 AIESALRTFEAEAGGVSALAAALKSDLGLAFAAATDLIRNAKGRLIVTGLGKSGHIGRKI 67 Query: 78 AATFASTGTPAFFVHAAEASHGDLGMITIDDVILALSWSGEQPEMRNLIAYAARFGIPLI 137 AATFASTGTPAFFVHAAEASHGDLGMIT DDVI+ALSWSGEQPEM+NLI YA RF IPLI Sbjct: 68 AATFASTGTPAFFVHAAEASHGDLGMITADDVIMALSWSGEQPEMKNLITYAKRFRIPLI 127 Query: 138 AMTADKDSTLSKAADVQLTLPKAREACPHNLAPTTSSLMMLALGDALAIALLEGRGFTST 197 AMTA++DSTL KAADV L PKAREACPHNLAPTTSSLM LALGD LAIALLEGRGFTS Sbjct: 128 AMTAERDSTLGKAADVALVQPKAREACPHNLAPTTSSLMQLALGDGLAIALLEGRGFTSV 187 Query: 198 DFSVLHPGGKLGALLKYARDLMHGGDALPLKPLGTKMSDALVEMTSKGFGCVGIVDRHGH 257 DFSVLHPGGKLGALLKY RDLMH GDA+PLKPLGTKMS+ALVEMTSKGFGCVG+ D G+ Sbjct: 188 DFSVLHPGGKLGALLKYTRDLMHSGDAIPLKPLGTKMSEALVEMTSKGFGCVGVTDGQGN 247 Query: 258 LVGIVTDGDLRRQMRPDLLTRSVDEVMTRTPKTISRDTLAGEVLELLNASKITTLIVTDA 317 LVGIVTDGDLRR MRPDL+T VD+VMT PKTI RD LAGE LE+LN+SKIT LIVT+ Sbjct: 248 LVGIVTDGDLRRHMRPDLMTARVDDVMTPHPKTIGRDLLAGEALEILNSSKITALIVTEG 307 Query: 318 KKPVGIIHLHDLLRAGVA 335 KKPVGI+HLHDLLRAGVA Sbjct: 308 KKPVGIVHLHDLLRAGVA 325 >ref|YP_488133.1| KpsF/GutQ family protein [Rhodopseudomonas palustris HaA2] gb|ABD09222.1| KpsF/GutQ family protein [Rhodopseudomonas palustris HaA2] Length = 336 Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust. Identities = 268/336 (79%), Positives = 296/336 (88%), Gaps = 1/336 (0%) Query: 1 MAKPKPLMTKSSGPDDGA-VQSALRTLDAEASGVAALSAALKSDLGAPFAAASELIGNAK 59 MA KP TK + D A + SALRTL+AEA GV AL+AAL+SDLG+ FAAA E I NAK Sbjct: 1 MALSKPRTTKPAMTDSAAAIPSALRTLEAEADGVTALAAALRSDLGSAFAAAIETIRNAK 60 Query: 60 GRLIVTGLGKSGHIGRKIAATFASTGTPAFFVHAAEASHGDLGMITIDDVILALSWSGEQ 119 GRLI+TGLGKSGHIGRKIAATFASTGTPAFFVHA+EASHGDLGMIT DD+ILA+SWSGEQ Sbjct: 61 GRLIITGLGKSGHIGRKIAATFASTGTPAFFVHASEASHGDLGMITADDIILAMSWSGEQ 120 Query: 120 PEMRNLIAYAARFGIPLIAMTADKDSTLSKAADVQLTLPKAREACPHNLAPTTSSLMMLA 179 PEM+NLI+YA RF I LIAMT+D STL+KAAD+ LTLPKAREACPHNLAPTTSSLMMLA Sbjct: 121 PEMKNLISYAKRFRIALIAMTSDSGSTLAKAADISLTLPKAREACPHNLAPTTSSLMMLA 180 Query: 180 LGDALAIALLEGRGFTSTDFSVLHPGGKLGALLKYARDLMHGGDALPLKPLGTKMSDALV 239 LGDA+AIALLE RGFTSTDFSVLHPGGKLGA+LKYARDLMH GDA+PLKPLGTKMSDALV Sbjct: 181 LGDAIAIALLESRGFTSTDFSVLHPGGKLGAMLKYARDLMHTGDAVPLKPLGTKMSDALV 240 Query: 240 EMTSKGFGCVGIVDRHGHLVGIVTDGDLRRQMRPDLLTRSVDEVMTRTPKTISRDTLAGE 299 EM++KGFGCVGIVD G + GIVTDGDLRR MRPDL+T +VDEVMT+ PKTIS LAGE Sbjct: 241 EMSAKGFGCVGIVDASGAVAGIVTDGDLRRHMRPDLMTATVDEVMTKRPKTISPGLLAGE 300 Query: 300 VLELLNASKITTLIVTDAKKPVGIIHLHDLLRAGVA 335 LELLN+SKIT L+VT+ KPVGI+HLHDLLRAGVA Sbjct: 301 TLELLNSSKITALLVTEGNKPVGIVHLHDLLRAGVA 336 >ref|YP_530659.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisB18] gb|ABD86340.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisB18] Length = 337 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 268/337 (79%), Positives = 292/337 (86%), Gaps = 2/337 (0%) Query: 1 MAKPKPLMTKSSGPDDG--AVQSALRTLDAEASGVAALSAALKSDLGAPFAAASELIGNA 58 M+ KP KSS D A+ SALRTL+AEA GV AL+AALKSDLG F AA+ LI NA Sbjct: 1 MSMSKPRSAKSSMTDQATDAIASALRTLEAEADGVTALAAALKSDLGPAFVAAANLITNA 60 Query: 59 KGRLIVTGLGKSGHIGRKIAATFASTGTPAFFVHAAEASHGDLGMITIDDVILALSWSGE 118 KGRLIVTGLGKSGHIGRK+AATFASTGTPAFFVHAAEASHGDLGMIT DDVILA+SWSGE Sbjct: 61 KGRLIVTGLGKSGHIGRKVAATFASTGTPAFFVHAAEASHGDLGMITPDDVILAMSWSGE 120 Query: 119 QPEMRNLIAYAARFGIPLIAMTADKDSTLSKAADVQLTLPKAREACPHNLAPTTSSLMML 178 QPEM+NLI YA RF I LIAM+AD DSTL +AADV L LPKAREACPHNLAPTTSS+M+L Sbjct: 121 QPEMKNLITYAKRFKIALIAMSADGDSTLGQAADVSLILPKAREACPHNLAPTTSSVMLL 180 Query: 179 ALGDALAIALLEGRGFTSTDFSVLHPGGKLGALLKYARDLMHGGDALPLKPLGTKMSDAL 238 ALGDALAIALLEGRGFTS DFSVLHPGGKLGA+LK+ARDLMH GDA+PL+PLGTKMSDAL Sbjct: 181 ALGDALAIALLEGRGFTSIDFSVLHPGGKLGAMLKFARDLMHSGDAIPLRPLGTKMSDAL 240 Query: 239 VEMTSKGFGCVGIVDRHGHLVGIVTDGDLRRQMRPDLLTRSVDEVMTRTPKTISRDTLAG 298 VEM+SKGFGCVGIVD G +VGIVTDGDLRR MR DL+T VDEVMT+ PKTIS LA Sbjct: 241 VEMSSKGFGCVGIVDSRGLVVGIVTDGDLRRHMRADLMTALVDEVMTKNPKTISPSLLAS 300 Query: 299 EVLELLNASKITTLIVTDAKKPVGIIHLHDLLRAGVA 335 E LE+LN+SKIT LIVT+ KKPVGI+HLHDLLRAGVA Sbjct: 301 ETLEILNSSKITALIVTEGKKPVGIVHLHDLLRAGVA 337