BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0085.0026.p         (149 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001990150.1| hypothetical protein Rpal_1133 [Rhodopseudom...   254   2e-66
ref|YP_001239326.1| hypothetical protein BBta_3319 [Bradyrhizobi...   247   5e-64
ref|YP_001992781.1| hypothetical protein Rpal_3807 [Rhodopseudom...   243   8e-63
ref|ZP_08627060.1| hypothetical protein CSIRO_0117 [Bradyrhizobi...   234   5e-60
ref|YP_570758.1| hypothetical protein RPD_3634 [Rhodopseudomonas...   232   1e-59

>ref|YP_001990150.1| hypothetical protein Rpal_1133 [Rhodopseudomonas palustris TIE-1]
 gb|ACE99674.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 149

 Score =  254 bits (650), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 124/149 (83%), Positives = 131/149 (87%)

Query: 1   MARKHHPTPLSGGDRKALTKELGRARAMTTILAGQAAEARAKGEALIRQADKLLCESWNE 60
           MA KHHPTPLSGGDRKAL KELGRARAMTTILA Q+AEAR KGEALIRQAD+LL ESWNE
Sbjct: 1   MAPKHHPTPLSGGDRKALQKELGRARAMTTILAAQSAEARTKGEALIRQADRLLSESWNE 60

Query: 61  RMWADGGPIDPSPTVDQAINGGFASLEIECSRCKTRRDVDLAVLRHPPTTFVHDLAGRLR 120
           RMWADGG +DPSPT+DQA+NGG+  LEIECSRC T+RDVDLA LRHPPTTFVHDLA RLR
Sbjct: 61  RMWADGGLMDPSPTIDQAVNGGYPWLEIECSRCMTKRDVDLAALRHPPTTFVHDLASRLR 120

Query: 121 CSKCAKAGRRPSATLLQLMSRPRLVAPET 149
           C KCAKA RRP ATLLQL  RPR  APET
Sbjct: 121 CGKCAKANRRPPATLLQLAQRPRQAAPET 149


>ref|YP_001239326.1| hypothetical protein BBta_3319 [Bradyrhizobium sp. BTAi1]
 gb|ABQ35420.1| hypothetical protein BBta_3319 [Bradyrhizobium sp. BTAi1]
          Length = 149

 Score =  247 bits (630), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 120/149 (80%), Positives = 129/149 (86%)

Query: 1   MARKHHPTPLSGGDRKALTKELGRARAMTTILAGQAAEARAKGEALIRQADKLLCESWNE 60
           MA KHHPTPLSGGDRKAL KELGRARAMTTILA QAAE RA+GEALIRQAD+LLCESWNE
Sbjct: 1   MAPKHHPTPLSGGDRKALAKELGRARAMTTILAEQAAEVRAQGEALIRQADRLLCESWNE 60

Query: 61  RMWADGGPIDPSPTVDQAINGGFASLEIECSRCKTRRDVDLAVLRHPPTTFVHDLAGRLR 120
           RMWA+GGP+DPSPT+DQAINGG+  L I CSRCK RR+VD A LR P TTF+HDLAGRLR
Sbjct: 61  RMWANGGPVDPSPTIDQAINGGYPWLGIACSRCKARREVDPATLRRPSTTFIHDLAGRLR 120

Query: 121 CSKCAKAGRRPSATLLQLMSRPRLVAPET 149
           CS+CAK  RRP ATLLQL  RPR  APET
Sbjct: 121 CSRCAKVNRRPPATLLQLAQRPRQAAPET 149


>ref|YP_001992781.1| hypothetical protein Rpal_3807 [Rhodopseudomonas palustris TIE-1]
 gb|ACF02306.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 149

 Score =  243 bits (619), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 119/149 (79%), Positives = 129/149 (86%)

Query: 1   MARKHHPTPLSGGDRKALTKELGRARAMTTILAGQAAEARAKGEALIRQADKLLCESWNE 60
           MA KHHPTPLSGGDRKAL KELGRARAMT+ILA Q+AEARAKGEALIR ADKLLCESWNE
Sbjct: 1   MAPKHHPTPLSGGDRKALQKELGRARAMTSILAAQSAEARAKGEALIRTADKLLCESWNE 60

Query: 61  RMWADGGPIDPSPTVDQAINGGFASLEIECSRCKTRRDVDLAVLRHPPTTFVHDLAGRLR 120
           RMWADGGPIDPSPT+DQA+NGG+  +EIECSRC+   +VDLA LR P TT VHDLA RLR
Sbjct: 61  RMWADGGPIDPSPTIDQAVNGGYCWIEIECSRCRAPNEVDLAGLRRPSTTCVHDLASRLR 120

Query: 121 CSKCAKAGRRPSATLLQLMSRPRLVAPET 149
           CSKCAKAG+RP+ATLLQL  R R   PET
Sbjct: 121 CSKCAKAGKRPAATLLQLAQRARHAGPET 149


>ref|ZP_08627060.1| hypothetical protein CSIRO_0117 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP10340.1| hypothetical protein CSIRO_0117 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 149

 Score =  234 bits (596), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 109/143 (76%), Positives = 124/143 (86%)

Query: 1   MARKHHPTPLSGGDRKALTKELGRARAMTTILAGQAAEARAKGEALIRQADKLLCESWNE 60
           MA K+HPTPLSGGDRKAL KELG+ARAM  ILA Q+ E RAKGEA+I+QAD+LLCESWNE
Sbjct: 1   MAPKYHPTPLSGGDRKALAKELGKARAMANILAAQSVEMRAKGEAMIQQADRLLCESWNE 60

Query: 61  RMWADGGPIDPSPTVDQAINGGFASLEIECSRCKTRRDVDLAVLRHPPTTFVHDLAGRLR 120
           RMW+DG PIDPSPT+DQA+NGG+  LEI C+RCKT  DVDLA ++HPPTTFVHDLA RLR
Sbjct: 61  RMWSDGEPIDPSPTIDQAVNGGYPWLEIMCARCKTPSDVDLAAMKHPPTTFVHDLASRLR 120

Query: 121 CSKCAKAGRRPSATLLQLMSRPR 143
           C KC +AGRRPSATLLQL  +PR
Sbjct: 121 CRKCVRAGRRPSATLLQLAWQPR 143


>ref|YP_570758.1| hypothetical protein RPD_3634 [Rhodopseudomonas palustris BisB5]
 gb|ABE40857.1| hypothetical protein RPD_3634 [Rhodopseudomonas palustris BisB5]
          Length = 149

 Score =  232 bits (592), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 112/148 (75%), Positives = 124/148 (83%)

Query: 1   MARKHHPTPLSGGDRKALTKELGRARAMTTILAGQAAEARAKGEALIRQADKLLCESWNE 60
           MARK+HPTPLSGGDRKAL KEL  AR MT ILA Q+ E R+KG+ALIRQAD+LLCESWNE
Sbjct: 1   MARKYHPTPLSGGDRKALKKELRSARGMTGILAAQSDEMRSKGDALIRQADRLLCESWNE 60

Query: 61  RMWADGGPIDPSPTVDQAINGGFASLEIECSRCKTRRDVDLAVLRHPPTTFVHDLAGRLR 120
           RMWADG P+DPSPT+DQA NGGF  L++ECSRC+T  DVDLA LR PPTTFVHDLA RLR
Sbjct: 61  RMWADGEPVDPSPTIDQATNGGFPWLQVECSRCRTPNDVDLAALRRPPTTFVHDLASRLR 120

Query: 121 CSKCAKAGRRPSATLLQLMSRPRLVAPE 148
           C KCA+ GRRP+ATLLQL  R R  APE
Sbjct: 121 CRKCAQTGRRPAATLLQLAQRRRNAAPE 148